Protein–RNA interactions for Protein: Q99PV0

Prpf8, Pre-mRNA-processing-splicing factor 8, mousemouse

Known RBP Predictions only

Length 2,335 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf8Q99PV0 Srsf10-205ENSMUST00000126641 3754 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Prpf8Q99PV0 Arfrp1-202ENSMUST00000108808 1133 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Prpf8Q99PV0 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Prpf8Q99PV0 Gm11535-201ENSMUST00000145517 778 ntTSL 3 BASIC11.79□□□□□ -0.52
Prpf8Q99PV0 Gm23984-201ENSMUST00000157139 203 ntBASIC11.79□□□□□ -0.52
Prpf8Q99PV0 Gm6266-201ENSMUST00000203844 806 ntBASIC11.79□□□□□ -0.52
Prpf8Q99PV0 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Prpf8Q99PV0 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Prpf8Q99PV0 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Prpf8Q99PV0 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Prpf8Q99PV0 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Prpf8Q99PV0 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC11.79□□□□□ -0.52
Prpf8Q99PV0 Rab11fip2-201ENSMUST00000051996 4482 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Prpf8Q99PV0 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Prpf8Q99PV0 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Prpf8Q99PV0 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Prpf8Q99PV0 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Prpf8Q99PV0 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Prpf8Q99PV0 Snrnp27-202ENSMUST00000113683 1005 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Prpf8Q99PV0 Rpl39-201ENSMUST00000115231 612 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Prpf8Q99PV0 Mir1897-201ENSMUST00000122581 272 ntBASIC11.78□□□□□ -0.52
Prpf8Q99PV0 Gm8602-201ENSMUST00000184045 607 ntBASIC11.78□□□□□ -0.52
Prpf8Q99PV0 Sar1b-201ENSMUST00000020653 1201 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Prpf8Q99PV0 Gm4129-201ENSMUST00000220083 625 ntTSL 3 BASIC11.78□□□□□ -0.52
Prpf8Q99PV0 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Prpf8Q99PV0 Prtn3-201ENSMUST00000006679 1025 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Prpf8Q99PV0 Gm6471-201ENSMUST00000097935 805 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Prpf8Q99PV0 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Prpf8Q99PV0 Utp4-201ENSMUST00000047629 2232 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Prpf8Q99PV0 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Prpf8Q99PV0 4930423C22Rik-201ENSMUST00000193863 1311 ntBASIC11.78□□□□□ -0.52
Prpf8Q99PV0 Gm5763-201ENSMUST00000155951 1530 ntBASIC11.78□□□□□ -0.52
Prpf8Q99PV0 Map2k7-211ENSMUST00000145165 2879 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Prpf8Q99PV0 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Prpf8Q99PV0 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Prpf8Q99PV0 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Prpf8Q99PV0 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC11.78□□□□□ -0.52
Prpf8Q99PV0 2810006K23Rik-202ENSMUST00000111477 1637 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Prpf8Q99PV0 Cdcp2-202ENSMUST00000221740 1623 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
Prpf8Q99PV0 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Prpf8Q99PV0 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Prpf8Q99PV0 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Prpf8Q99PV0 Dnase1l1-203ENSMUST00000114189 755 ntTSL 3 BASIC11.78□□□□□ -0.52
Prpf8Q99PV0 Gm15420-201ENSMUST00000133274 382 ntTSL 3 BASIC11.78□□□□□ -0.52
Prpf8Q99PV0 1700110K17Rik-202ENSMUST00000156511 927 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Prpf8Q99PV0 A930015D03Rik-201ENSMUST00000173900 1111 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Prpf8Q99PV0 Gm18018-201ENSMUST00000198273 408 ntBASIC11.78□□□□□ -0.52
Prpf8Q99PV0 Gm6745-201ENSMUST00000199216 526 ntBASIC11.78□□□□□ -0.52
Prpf8Q99PV0 Swi5-201ENSMUST00000050410 775 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Prpf8Q99PV0 Rassf8-202ENSMUST00000058538 1131 ntBASIC11.78□□□□□ -0.52
Prpf8Q99PV0 H2bfm-201ENSMUST00000059808 1052 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
Prpf8Q99PV0 Olfr373-201ENSMUST00000074540 945 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
Prpf8Q99PV0 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Prpf8Q99PV0 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Prpf8Q99PV0 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Prpf8Q99PV0 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC11.78□□□□□ -0.52
Prpf8Q99PV0 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Prpf8Q99PV0 Lpar5-201ENSMUST00000088292 1393 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Prpf8Q99PV0 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Prpf8Q99PV0 Fbxo41-201ENSMUST00000159062 6505 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Prpf8Q99PV0 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
Prpf8Q99PV0 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Prpf8Q99PV0 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Prpf8Q99PV0 Dlgap3-201ENSMUST00000046659 3884 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Prpf8Q99PV0 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Prpf8Q99PV0 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Prpf8Q99PV0 Myo10-202ENSMUST00000110457 8125 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Prpf8Q99PV0 Hist1h4d-201ENSMUST00000102968 1138 ntAPPRIS P1 BASIC11.77□□□□□ -0.52
Prpf8Q99PV0 Gtf2a2-202ENSMUST00000118198 893 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Prpf8Q99PV0 Gm13829-201ENSMUST00000119600 138 ntBASIC11.77□□□□□ -0.52
Prpf8Q99PV0 Gm12138-201ENSMUST00000122180 951 ntBASIC11.77□□□□□ -0.52
Prpf8Q99PV0 Atp6v1f-203ENSMUST00000149646 806 ntTSL 5 BASIC11.77□□□□□ -0.52
Prpf8Q99PV0 Mir1938-201ENSMUST00000158746 100 ntBASIC11.77□□□□□ -0.52
Prpf8Q99PV0 Gm8515-201ENSMUST00000194852 576 ntBASIC11.77□□□□□ -0.52
Prpf8Q99PV0 Hdhd3-201ENSMUST00000037820 1205 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Prpf8Q99PV0 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Prpf8Q99PV0 Add3-202ENSMUST00000050096 4488 ntAPPRIS ALT1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Prpf8Q99PV0 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
Prpf8Q99PV0 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.52
Prpf8Q99PV0 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Prpf8Q99PV0 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Prpf8Q99PV0 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.53
Prpf8Q99PV0 Nfxl1-202ENSMUST00000087216 3712 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
Prpf8Q99PV0 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC11.77□□□□□ -0.53
Prpf8Q99PV0 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Prpf8Q99PV0 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Prpf8Q99PV0 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC11.77□□□□□ -0.53
Prpf8Q99PV0 Gm8131-201ENSMUST00000213783 1570 ntBASIC11.77□□□□□ -0.53
Prpf8Q99PV0 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC11.77□□□□□ -0.53
Prpf8Q99PV0 Coa6-202ENSMUST00000211868 564 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Prpf8Q99PV0 Gm10313-201ENSMUST00000095320 1002 ntBASIC11.77□□□□□ -0.53
Prpf8Q99PV0 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
Prpf8Q99PV0 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Prpf8Q99PV0 Trpm4-201ENSMUST00000042194 4234 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Prpf8Q99PV0 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC11.77□□□□□ -0.53
Prpf8Q99PV0 Slc6a8-201ENSMUST00000033752 3964 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Prpf8Q99PV0 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Prpf8Q99PV0 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Prpf8Q99PV0 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Prpf8Q99PV0 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC11.77□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 28.7 ms