Protein–RNA interactions for Protein: Q99MQ5

Col25a1, Collagen alpha-1(XXV) chain, mousemouse

Predictions only

Length 666 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col25a1Q99MQ5 Gm16136-203ENSMUST00000162520 1121 ntTSL 2 BASIC14.84□□□□□ -0.03
Col25a1Q99MQ5 Mir6979-201ENSMUST00000183927 56 ntBASIC14.84□□□□□ -0.03
Col25a1Q99MQ5 Gm11523-203ENSMUST00000184482 802 ntTSL 3 BASIC14.84□□□□□ -0.03
Col25a1Q99MQ5 Gm29585-201ENSMUST00000185270 514 ntTSL 5 BASIC14.84□□□□□ -0.03
Col25a1Q99MQ5 Gm8597-201ENSMUST00000191525 1109 ntBASIC14.84□□□□□ -0.03
Col25a1Q99MQ5 Fam24a-203ENSMUST00000207784 600 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Col25a1Q99MQ5 Arrdc5-201ENSMUST00000097303 1054 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Col25a1Q99MQ5 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Col25a1Q99MQ5 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Col25a1Q99MQ5 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Col25a1Q99MQ5 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Col25a1Q99MQ5 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Col25a1Q99MQ5 Bscl2-201ENSMUST00000086058 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Col25a1Q99MQ5 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Col25a1Q99MQ5 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Col25a1Q99MQ5 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Col25a1Q99MQ5 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Col25a1Q99MQ5 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Col25a1Q99MQ5 Gm14026-201ENSMUST00000120625 1789 ntBASIC14.83□□□□□ -0.03
Col25a1Q99MQ5 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Col25a1Q99MQ5 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Col25a1Q99MQ5 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Col25a1Q99MQ5 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
Col25a1Q99MQ5 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
Col25a1Q99MQ5 Gm7820-201ENSMUST00000121012 1052 ntBASIC14.83□□□□□ -0.04
Col25a1Q99MQ5 Fbxw4-203ENSMUST00000160003 387 ntTSL 3 BASIC14.83□□□□□ -0.04
Col25a1Q99MQ5 9130604C24Rik-201ENSMUST00000197965 956 ntBASIC14.83□□□□□ -0.04
Col25a1Q99MQ5 Gm38804-201ENSMUST00000203998 767 ntTSL 3 BASIC14.83□□□□□ -0.04
Col25a1Q99MQ5 Gm44608-201ENSMUST00000206827 855 ntBASIC14.83□□□□□ -0.04
Col25a1Q99MQ5 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Col25a1Q99MQ5 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Col25a1Q99MQ5 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Col25a1Q99MQ5 Tom1-202ENSMUST00000165630 2267 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Col25a1Q99MQ5 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Col25a1Q99MQ5 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Col25a1Q99MQ5 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Col25a1Q99MQ5 Gm45667-201ENSMUST00000210380 1316 ntBASIC14.83□□□□□ -0.04
Col25a1Q99MQ5 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
Col25a1Q99MQ5 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Col25a1Q99MQ5 Wdr53-201ENSMUST00000023474 1394 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Col25a1Q99MQ5 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Col25a1Q99MQ5 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Col25a1Q99MQ5 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC14.83□□□□□ -0.04
Col25a1Q99MQ5 Trim34b-201ENSMUST00000106847 1827 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Col25a1Q99MQ5 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC14.82□□□□□ -0.04
Col25a1Q99MQ5 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC14.82□□□□□ -0.04
Col25a1Q99MQ5 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Col25a1Q99MQ5 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Col25a1Q99MQ5 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Col25a1Q99MQ5 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Col25a1Q99MQ5 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Col25a1Q99MQ5 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Col25a1Q99MQ5 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Col25a1Q99MQ5 Gm16087-201ENSMUST00000124395 964 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Col25a1Q99MQ5 Nudcd2-203ENSMUST00000127382 727 ntTSL 2 BASIC14.82□□□□□ -0.04
Col25a1Q99MQ5 Gm11684-201ENSMUST00000144975 757 ntTSL 5 BASIC14.82□□□□□ -0.04
Col25a1Q99MQ5 Gm20404-201ENSMUST00000174032 621 ntTSL 3 BASIC14.82□□□□□ -0.04
Col25a1Q99MQ5 Gm19184-201ENSMUST00000196798 928 ntBASIC14.82□□□□□ -0.04
Col25a1Q99MQ5 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Col25a1Q99MQ5 Gm43118-201ENSMUST00000199149 775 ntBASIC14.82□□□□□ -0.04
Col25a1Q99MQ5 Gm45505-201ENSMUST00000210252 948 ntTSL 5 BASIC14.82□□□□□ -0.04
Col25a1Q99MQ5 Gm19309-201ENSMUST00000218295 205 ntBASIC14.82□□□□□ -0.04
Col25a1Q99MQ5 Mea1-201ENSMUST00000002845 840 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Col25a1Q99MQ5 Txn1-201ENSMUST00000030051 1051 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Col25a1Q99MQ5 Dmac1-201ENSMUST00000030103 741 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Col25a1Q99MQ5 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Col25a1Q99MQ5 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Col25a1Q99MQ5 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
Col25a1Q99MQ5 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Col25a1Q99MQ5 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Col25a1Q99MQ5 Clec4g-201ENSMUST00000058040 1441 ntTSL 5 BASIC14.82□□□□□ -0.04
Col25a1Q99MQ5 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
Col25a1Q99MQ5 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
Col25a1Q99MQ5 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC14.82□□□□□ -0.04
Col25a1Q99MQ5 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Col25a1Q99MQ5 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Col25a1Q99MQ5 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Col25a1Q99MQ5 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Col25a1Q99MQ5 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Col25a1Q99MQ5 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Col25a1Q99MQ5 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Col25a1Q99MQ5 Gm6756-201ENSMUST00000180647 1620 ntBASIC14.81□□□□□ -0.04
Col25a1Q99MQ5 Crat-202ENSMUST00000102854 2160 ntTSL 5 BASIC14.81□□□□□ -0.04
Col25a1Q99MQ5 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC14.81□□□□□ -0.04
Col25a1Q99MQ5 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Col25a1Q99MQ5 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Col25a1Q99MQ5 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Col25a1Q99MQ5 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC14.81□□□□□ -0.04
Col25a1Q99MQ5 Psme2b-201ENSMUST00000104958 837 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
Col25a1Q99MQ5 Gfpt1-203ENSMUST00000113657 1200 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Col25a1Q99MQ5 Prss41-202ENSMUST00000122936 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Col25a1Q99MQ5 H60b-202ENSMUST00000131558 1080 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Col25a1Q99MQ5 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Col25a1Q99MQ5 2010001A14Rik-203ENSMUST00000152790 714 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Col25a1Q99MQ5 Gm38341-201ENSMUST00000195357 515 ntBASIC14.81□□□□□ -0.04
Col25a1Q99MQ5 AC156560.2-201ENSMUST00000221232 264 ntBASIC14.81□□□□□ -0.04
Col25a1Q99MQ5 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Col25a1Q99MQ5 Asna1-201ENSMUST00000064314 1256 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Col25a1Q99MQ5 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
Col25a1Q99MQ5 Cma2-201ENSMUST00000089555 947 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 58.1 ms