Protein–RNA interactions for Protein: Q99LU0

Chmp1b1, Charged multivesicular body protein 1b-1, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp1b1Q99LU0 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Chmp1b1Q99LU0 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Chmp1b1Q99LU0 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Chmp1b1Q99LU0 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Chmp1b1Q99LU0 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC13.61□□□□□ -0.23
Chmp1b1Q99LU0 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC13.61□□□□□ -0.23
Chmp1b1Q99LU0 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Chmp1b1Q99LU0 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Chmp1b1Q99LU0 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Chmp1b1Q99LU0 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Chmp1b1Q99LU0 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC13.61□□□□□ -0.23
Chmp1b1Q99LU0 Traf6-201ENSMUST00000004949 6169 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Chmp1b1Q99LU0 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Chmp1b1Q99LU0 Mavs-202ENSMUST00000110199 3057 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Chmp1b1Q99LU0 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Chmp1b1Q99LU0 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Chmp1b1Q99LU0 Shank2-203ENSMUST00000105902 8988 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Chmp1b1Q99LU0 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Chmp1b1Q99LU0 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Chmp1b1Q99LU0 Setd1a-202ENSMUST00000047157 5927 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Chmp1b1Q99LU0 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Chmp1b1Q99LU0 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC13.6□□□□□ -0.23
Chmp1b1Q99LU0 Per1-206ENSMUST00000166748 4636 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Chmp1b1Q99LU0 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Chmp1b1Q99LU0 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Chmp1b1Q99LU0 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
Chmp1b1Q99LU0 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Chmp1b1Q99LU0 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Chmp1b1Q99LU0 Ankrd17-201ENSMUST00000014421 10458 ntAPPRIS P4 TSL 5 BASIC13.6□□□□□ -0.23
Chmp1b1Q99LU0 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC13.6□□□□□ -0.23
Chmp1b1Q99LU0 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Chmp1b1Q99LU0 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC13.6□□□□□ -0.23
Chmp1b1Q99LU0 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC13.6□□□□□ -0.23
Chmp1b1Q99LU0 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Chmp1b1Q99LU0 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC13.6□□□□□ -0.23
Chmp1b1Q99LU0 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Chmp1b1Q99LU0 Gm6736-201ENSMUST00000166583 948 ntBASIC13.6□□□□□ -0.23
Chmp1b1Q99LU0 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC13.6□□□□□ -0.23
Chmp1b1Q99LU0 Gm2756-201ENSMUST00000195851 400 ntBASIC13.6□□□□□ -0.23
Chmp1b1Q99LU0 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Chmp1b1Q99LU0 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Chmp1b1Q99LU0 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Chmp1b1Q99LU0 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Chmp1b1Q99LU0 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Chmp1b1Q99LU0 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Chmp1b1Q99LU0 Itfg1-201ENSMUST00000034140 3306 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Chmp1b1Q99LU0 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Chmp1b1Q99LU0 Spag9-202ENSMUST00000041956 7340 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Chmp1b1Q99LU0 Ret-201ENSMUST00000032201 5456 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Chmp1b1Q99LU0 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Chmp1b1Q99LU0 Adam15-201ENSMUST00000029676 2975 ntAPPRIS P4 TSL 1 (best) BASIC13.59□□□□□ -0.23
Chmp1b1Q99LU0 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Chmp1b1Q99LU0 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Chmp1b1Q99LU0 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Chmp1b1Q99LU0 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Chmp1b1Q99LU0 Mllt6-202ENSMUST00000107586 7206 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
Chmp1b1Q99LU0 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Chmp1b1Q99LU0 Eef1e1-201ENSMUST00000001757 2553 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Chmp1b1Q99LU0 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC13.59□□□□□ -0.23
Chmp1b1Q99LU0 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Chmp1b1Q99LU0 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Chmp1b1Q99LU0 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Chmp1b1Q99LU0 Tnrc6c-201ENSMUST00000026658 8724 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Chmp1b1Q99LU0 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Chmp1b1Q99LU0 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Chmp1b1Q99LU0 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Chmp1b1Q99LU0 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC13.59□□□□□ -0.23
Chmp1b1Q99LU0 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC13.59□□□□□ -0.23
Chmp1b1Q99LU0 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC13.59□□□□□ -0.23
Chmp1b1Q99LU0 CT943659.1-201ENSMUST00000215459 326 ntBASIC13.59□□□□□ -0.23
Chmp1b1Q99LU0 Ndufaf2-202ENSMUST00000223734 556 ntBASIC13.59□□□□□ -0.23
Chmp1b1Q99LU0 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Chmp1b1Q99LU0 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Chmp1b1Q99LU0 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Chmp1b1Q99LU0 Pik3cd-214ENSMUST00000177654 4765 ntAPPRIS P4 TSL 5 BASIC13.59□□□□□ -0.23
Chmp1b1Q99LU0 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Chmp1b1Q99LU0 Syngr1-201ENSMUST00000009727 4180 ntAPPRIS P4 TSL 1 (best) BASIC13.59□□□□□ -0.23
Chmp1b1Q99LU0 Klk7-201ENSMUST00000032955 1895 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Chmp1b1Q99LU0 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Chmp1b1Q99LU0 Scarf1-202ENSMUST00000118243 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Chmp1b1Q99LU0 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Chmp1b1Q99LU0 Eif2a-201ENSMUST00000029387 2299 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Chmp1b1Q99LU0 Nrxn1-202ENSMUST00000072671 8118 ntTSL 5 BASIC13.58□□□□□ -0.23
Chmp1b1Q99LU0 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.23
Chmp1b1Q99LU0 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Chmp1b1Q99LU0 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Chmp1b1Q99LU0 Myo10-202ENSMUST00000110457 8125 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Chmp1b1Q99LU0 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC13.58□□□□□ -0.23
Chmp1b1Q99LU0 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Chmp1b1Q99LU0 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Chmp1b1Q99LU0 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Chmp1b1Q99LU0 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Chmp1b1Q99LU0 Phf24-201ENSMUST00000069184 6392 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Chmp1b1Q99LU0 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC13.58□□□□□ -0.24
Chmp1b1Q99LU0 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC13.58□□□□□ -0.24
Chmp1b1Q99LU0 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Chmp1b1Q99LU0 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Chmp1b1Q99LU0 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Chmp1b1Q99LU0 Gdap1l1-203ENSMUST00000109421 1206 ntAPPRIS ALT1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Chmp1b1Q99LU0 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 23.6 ms