Protein–RNA interactions for Protein: Q99LE3

Lysmd3, LysM and putative peptidoglycan-binding domain-containing protein 3, mousemouse

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd3Q99LE3 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
Lysmd3Q99LE3 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Lysmd3Q99LE3 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Lysmd3Q99LE3 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
Lysmd3Q99LE3 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Lysmd3Q99LE3 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
Lysmd3Q99LE3 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Lysmd3Q99LE3 Diablo-202ENSMUST00000111586 719 ntTSL 5 BASIC14.91□□□□□ -0.02
Lysmd3Q99LE3 Zfp637-202ENSMUST00000112859 421 ntTSL 2 BASIC14.91□□□□□ -0.02
Lysmd3Q99LE3 1700060J05Rik-201ENSMUST00000138377 1060 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Lysmd3Q99LE3 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Lysmd3Q99LE3 Gm16091-201ENSMUST00000156664 963 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Lysmd3Q99LE3 Gstt1-201ENSMUST00000001713 1037 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Lysmd3Q99LE3 Cox6b2-203ENSMUST00000182111 585 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Lysmd3Q99LE3 Gm37596-201ENSMUST00000193565 1021 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
Lysmd3Q99LE3 AC123645.1-201ENSMUST00000228469 605 ntBASIC14.91□□□□□ -0.02
Lysmd3Q99LE3 Diablo-201ENSMUST00000031385 681 ntTSL 2 BASIC14.91□□□□□ -0.02
Lysmd3Q99LE3 Pts-201ENSMUST00000034570 1046 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Lysmd3Q99LE3 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
Lysmd3Q99LE3 Cant1-202ENSMUST00000092378 2995 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Lysmd3Q99LE3 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Lysmd3Q99LE3 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Lysmd3Q99LE3 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Lysmd3Q99LE3 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
Lysmd3Q99LE3 Arid5a-201ENSMUST00000097778 2270 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Lysmd3Q99LE3 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Lysmd3Q99LE3 Sirt3-202ENSMUST00000106048 1416 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Lysmd3Q99LE3 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Lysmd3Q99LE3 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Lysmd3Q99LE3 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Lysmd3Q99LE3 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
Lysmd3Q99LE3 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
Lysmd3Q99LE3 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
Lysmd3Q99LE3 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Lysmd3Q99LE3 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Lysmd3Q99LE3 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Lysmd3Q99LE3 Moxd1-201ENSMUST00000095784 3090 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Lysmd3Q99LE3 Impad1-201ENSMUST00000084949 6543 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Lysmd3Q99LE3 Samd14-201ENSMUST00000055947 3318 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Lysmd3Q99LE3 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Lysmd3Q99LE3 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Lysmd3Q99LE3 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC14.9□□□□□ -0.02
Lysmd3Q99LE3 Gm26935-201ENSMUST00000182686 519 ntTSL 5 BASIC14.9□□□□□ -0.02
Lysmd3Q99LE3 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Lysmd3Q99LE3 Gm7775-201ENSMUST00000218871 853 ntBASIC14.9□□□□□ -0.02
Lysmd3Q99LE3 Myl6b-201ENSMUST00000026428 1026 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Lysmd3Q99LE3 Zswim7-201ENSMUST00000072916 732 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Lysmd3Q99LE3 S100a7a-201ENSMUST00000079286 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Lysmd3Q99LE3 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Lysmd3Q99LE3 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Lysmd3Q99LE3 G3bp2-209ENSMUST00000202258 1884 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
Lysmd3Q99LE3 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Lysmd3Q99LE3 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Lysmd3Q99LE3 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Lysmd3Q99LE3 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Lysmd3Q99LE3 AC124751.1-201ENSMUST00000222716 1408 ntBASIC14.9□□□□□ -0.02
Lysmd3Q99LE3 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Lysmd3Q99LE3 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Lysmd3Q99LE3 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Lysmd3Q99LE3 Gm8334-201ENSMUST00000112755 1662 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
Lysmd3Q99LE3 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Lysmd3Q99LE3 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Lysmd3Q99LE3 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC14.9□□□□□ -0.02
Lysmd3Q99LE3 Elovl1-207ENSMUST00000167636 1340 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Lysmd3Q99LE3 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Lysmd3Q99LE3 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
Lysmd3Q99LE3 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Lysmd3Q99LE3 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Lysmd3Q99LE3 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Lysmd3Q99LE3 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Lysmd3Q99LE3 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Lysmd3Q99LE3 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Lysmd3Q99LE3 Psmd8-202ENSMUST00000182328 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Lysmd3Q99LE3 D130052B06Rik-201ENSMUST00000101371 2295 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Lysmd3Q99LE3 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Lysmd3Q99LE3 Ntng2-201ENSMUST00000048455 1770 ntAPPRIS P4 TSL 1 (best) BASIC14.89□□□□□ -0.03
Lysmd3Q99LE3 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Lysmd3Q99LE3 Pdgfrl-201ENSMUST00000034004 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Lysmd3Q99LE3 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC14.89□□□□□ -0.03
Lysmd3Q99LE3 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC14.89□□□□□ -0.03
Lysmd3Q99LE3 Gm12428-201ENSMUST00000119844 727 ntBASIC14.89□□□□□ -0.03
Lysmd3Q99LE3 Gm14042-201ENSMUST00000120139 833 ntBASIC14.89□□□□□ -0.03
Lysmd3Q99LE3 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC14.89□□□□□ -0.03
Lysmd3Q99LE3 Arhgap27os1-201ENSMUST00000130556 923 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Lysmd3Q99LE3 Tm7sf2-209ENSMUST00000161528 732 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Lysmd3Q99LE3 Mir8102-201ENSMUST00000184148 139 ntBASIC14.89□□□□□ -0.03
Lysmd3Q99LE3 Gm37117-201ENSMUST00000194238 589 ntTSL 5 BASIC14.89□□□□□ -0.03
Lysmd3Q99LE3 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC14.89□□□□□ -0.03
Lysmd3Q99LE3 Gm46209-201ENSMUST00000217912 553 ntBASIC14.89□□□□□ -0.03
Lysmd3Q99LE3 Haus1-201ENSMUST00000048192 1004 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Lysmd3Q99LE3 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Lysmd3Q99LE3 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Lysmd3Q99LE3 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
Lysmd3Q99LE3 Dap3-207ENSMUST00000173135 1409 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
Lysmd3Q99LE3 Nt5dc2-201ENSMUST00000090212 1407 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Lysmd3Q99LE3 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Lysmd3Q99LE3 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Lysmd3Q99LE3 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Lysmd3Q99LE3 Arf2-201ENSMUST00000057921 2242 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Lysmd3Q99LE3 Samhd1-202ENSMUST00000088523 1996 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 32.4 ms