Protein–RNA interactions for Protein: Q91XZ2

Pcdhb8, Protocadherin beta-8, mousemouse

Predictions only

Length 779 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb8Q91XZ2 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Pcdhb8Q91XZ2 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Pcdhb8Q91XZ2 Gm20546-201ENSMUST00000173141 1889 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Pcdhb8Q91XZ2 B3gnt8-201ENSMUST00000076034 1463 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Pcdhb8Q91XZ2 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Pcdhb8Q91XZ2 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Pcdhb8Q91XZ2 Prkcd-207ENSMUST00000112210 2777 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Pcdhb8Q91XZ2 Lipo3-201ENSMUST00000025694 2768 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Pcdhb8Q91XZ2 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Pcdhb8Q91XZ2 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Pcdhb8Q91XZ2 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
Pcdhb8Q91XZ2 Slc25a47-201ENSMUST00000057026 1580 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Pcdhb8Q91XZ2 Pafah1b1-202ENSMUST00000102520 5789 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Pcdhb8Q91XZ2 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Pcdhb8Q91XZ2 Slc2a6-201ENSMUST00000045702 2138 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Pcdhb8Q91XZ2 Tspyl1-201ENSMUST00000061372 3086 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
Pcdhb8Q91XZ2 Tmem30a-202ENSMUST00000120690 3627 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Pcdhb8Q91XZ2 Fam19a4-201ENSMUST00000089295 2190 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Pcdhb8Q91XZ2 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Pcdhb8Q91XZ2 Mpped1-203ENSMUST00000109470 3281 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Pcdhb8Q91XZ2 Rasal3-207ENSMUST00000137458 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Pcdhb8Q91XZ2 Heatr3-201ENSMUST00000034079 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Pcdhb8Q91XZ2 Gm6973-201ENSMUST00000117080 721 ntBASIC14.05□□□□□ -0.16
Pcdhb8Q91XZ2 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC14.05□□□□□ -0.16
Pcdhb8Q91XZ2 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC14.05□□□□□ -0.16
Pcdhb8Q91XZ2 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC14.05□□□□□ -0.16
Pcdhb8Q91XZ2 Abhd18-207ENSMUST00000203892 1021 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Pcdhb8Q91XZ2 Gm20553-201ENSMUST00000204205 844 ntBASIC14.05□□□□□ -0.16
Pcdhb8Q91XZ2 Olfr370-201ENSMUST00000058609 1096 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
Pcdhb8Q91XZ2 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
Pcdhb8Q91XZ2 Psma3-202ENSMUST00000160027 2846 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Pcdhb8Q91XZ2 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Pcdhb8Q91XZ2 Elovl1-201ENSMUST00000006557 1811 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Pcdhb8Q91XZ2 Ddx42-201ENSMUST00000021046 4011 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Pcdhb8Q91XZ2 Foxo3-203ENSMUST00000105502 6848 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Pcdhb8Q91XZ2 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
Pcdhb8Q91XZ2 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Pcdhb8Q91XZ2 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC14.05□□□□□ -0.16
Pcdhb8Q91XZ2 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
Pcdhb8Q91XZ2 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC14.05□□□□□ -0.16
Pcdhb8Q91XZ2 Ap4b1-202ENSMUST00000076599 2692 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Pcdhb8Q91XZ2 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Pcdhb8Q91XZ2 9330182L06Rik-202ENSMUST00000115348 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Pcdhb8Q91XZ2 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Pcdhb8Q91XZ2 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Pcdhb8Q91XZ2 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Pcdhb8Q91XZ2 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Pcdhb8Q91XZ2 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Pcdhb8Q91XZ2 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Pcdhb8Q91XZ2 Tepsin-203ENSMUST00000106225 2566 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Pcdhb8Q91XZ2 Il2rb-202ENSMUST00000163494 1894 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Pcdhb8Q91XZ2 Fh1-201ENSMUST00000027810 2636 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Pcdhb8Q91XZ2 Gm27177-203ENSMUST00000184034 1911 ntTSL 5 BASIC14.04□□□□□ -0.16
Pcdhb8Q91XZ2 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Pcdhb8Q91XZ2 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Pcdhb8Q91XZ2 Bnipl-204ENSMUST00000137250 1251 ntTSL 5 BASIC14.04□□□□□ -0.16
Pcdhb8Q91XZ2 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Pcdhb8Q91XZ2 Gm27525-201ENSMUST00000184465 107 ntBASIC14.04□□□□□ -0.16
Pcdhb8Q91XZ2 Ybx1-ps2-201ENSMUST00000201305 957 ntBASIC14.04□□□□□ -0.16
Pcdhb8Q91XZ2 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Pcdhb8Q91XZ2 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Pcdhb8Q91XZ2 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Pcdhb8Q91XZ2 Gm10175-201ENSMUST00000086013 645 ntBASIC14.04□□□□□ -0.16
Pcdhb8Q91XZ2 Cant1-202ENSMUST00000092378 2995 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Pcdhb8Q91XZ2 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Pcdhb8Q91XZ2 Acin1-201ENSMUST00000022793 4735 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Pcdhb8Q91XZ2 Ralgapb-201ENSMUST00000046274 8366 ntAPPRIS ALT1 TSL 5 BASIC14.04□□□□□ -0.16
Pcdhb8Q91XZ2 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Pcdhb8Q91XZ2 Rnf181-201ENSMUST00000069580 1434 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Pcdhb8Q91XZ2 Abl2-201ENSMUST00000027888 3549 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Pcdhb8Q91XZ2 Commd10-201ENSMUST00000049388 1561 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Pcdhb8Q91XZ2 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Pcdhb8Q91XZ2 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Pcdhb8Q91XZ2 Cdcp2-202ENSMUST00000221740 1623 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Pcdhb8Q91XZ2 Prkg1-202ENSMUST00000073581 2841 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Pcdhb8Q91XZ2 Map2k7-211ENSMUST00000145165 2879 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Pcdhb8Q91XZ2 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Pcdhb8Q91XZ2 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Pcdhb8Q91XZ2 Narfl-204ENSMUST00000134108 2062 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Pcdhb8Q91XZ2 Ociad2-204ENSMUST00000200830 2384 ntTSL 3 BASIC14.03□□□□□ -0.16
Pcdhb8Q91XZ2 Kcnj12-201ENSMUST00000041944 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Pcdhb8Q91XZ2 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Pcdhb8Q91XZ2 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Pcdhb8Q91XZ2 Gm43738-201ENSMUST00000200659 2635 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Pcdhb8Q91XZ2 Ick-203ENSMUST00000117330 2698 ntAPPRIS ALT2 TSL 2 BASIC14.03□□□□□ -0.16
Pcdhb8Q91XZ2 Aste1-201ENSMUST00000035181 2755 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Pcdhb8Q91XZ2 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Pcdhb8Q91XZ2 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Pcdhb8Q91XZ2 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Pcdhb8Q91XZ2 Ylpm1-207ENSMUST00000168977 4893 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Pcdhb8Q91XZ2 Zfp219-201ENSMUST00000067549 2933 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Pcdhb8Q91XZ2 Lrp11-203ENSMUST00000130590 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Pcdhb8Q91XZ2 Rbm34-201ENSMUST00000045994 3424 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Pcdhb8Q91XZ2 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Pcdhb8Q91XZ2 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Pcdhb8Q91XZ2 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC14.03□□□□□ -0.16
Pcdhb8Q91XZ2 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Pcdhb8Q91XZ2 Saa1-201ENSMUST00000128088 609 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Pcdhb8Q91XZ2 Gm11025-201ENSMUST00000140773 466 ntBASIC14.03□□□□□ -0.16
Pcdhb8Q91XZ2 Ndufa1-201ENSMUST00000016571 419 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 31.8 ms