Protein–RNA interactions for Protein: Q91XY8

Pcdhga11, Protocadherin gamma A11, mousemouse

Predictions only

Length 933 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga11Q91XY8 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Pcdhga11Q91XY8 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Pcdhga11Q91XY8 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Pcdhga11Q91XY8 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Pcdhga11Q91XY8 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Pcdhga11Q91XY8 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Pcdhga11Q91XY8 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Pcdhga11Q91XY8 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Pcdhga11Q91XY8 Rbm33-202ENSMUST00000059644 9510 ntAPPRIS P2 TSL 5 BASIC13.92□□□□□ -0.18
Pcdhga11Q91XY8 AC164565.1-201ENSMUST00000217520 1484 ntBASIC13.92□□□□□ -0.18
Pcdhga11Q91XY8 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Pcdhga11Q91XY8 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Pcdhga11Q91XY8 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC13.92□□□□□ -0.18
Pcdhga11Q91XY8 Dab1-203ENSMUST00000106830 5278 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Pcdhga11Q91XY8 Tcp11l1-201ENSMUST00000028597 3512 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Pcdhga11Q91XY8 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Pcdhga11Q91XY8 Mapk7-202ENSMUST00000101085 3254 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Pcdhga11Q91XY8 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Pcdhga11Q91XY8 Gm13410-201ENSMUST00000117058 1415 ntBASIC13.91□□□□□ -0.18
Pcdhga11Q91XY8 Gm13233-201ENSMUST00000118760 1443 ntBASIC13.91□□□□□ -0.18
Pcdhga11Q91XY8 Gm13244-201ENSMUST00000118855 1446 ntBASIC13.91□□□□□ -0.18
Pcdhga11Q91XY8 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Pcdhga11Q91XY8 Prickle3-201ENSMUST00000033485 2301 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Pcdhga11Q91XY8 Rbbp8nl-201ENSMUST00000038529 2319 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Pcdhga11Q91XY8 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
Pcdhga11Q91XY8 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
Pcdhga11Q91XY8 Pank4-201ENSMUST00000030931 2508 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Pcdhga11Q91XY8 Pafah1b1-202ENSMUST00000102520 5789 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Pcdhga11Q91XY8 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Pcdhga11Q91XY8 Slc25a25-204ENSMUST00000113308 2643 ntTSL 5 BASIC13.91□□□□□ -0.18
Pcdhga11Q91XY8 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC13.91□□□□□ -0.18
Pcdhga11Q91XY8 Ccnh-202ENSMUST00000163600 1055 ntTSL 5 BASIC13.91□□□□□ -0.18
Pcdhga11Q91XY8 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC13.91□□□□□ -0.18
Pcdhga11Q91XY8 Gm27301-201ENSMUST00000184012 127 ntBASIC13.91□□□□□ -0.18
Pcdhga11Q91XY8 Gm27702-201ENSMUST00000184512 56 ntBASIC13.91□□□□□ -0.18
Pcdhga11Q91XY8 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC13.91□□□□□ -0.18
Pcdhga11Q91XY8 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Pcdhga11Q91XY8 AC174742.1-201ENSMUST00000218272 304 ntBASIC13.91□□□□□ -0.18
Pcdhga11Q91XY8 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
Pcdhga11Q91XY8 Naa50-201ENSMUST00000063520 3557 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
Pcdhga11Q91XY8 Tmem184a-201ENSMUST00000044002 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Pcdhga11Q91XY8 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Pcdhga11Q91XY8 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Pcdhga11Q91XY8 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC13.91□□□□□ -0.18
Pcdhga11Q91XY8 Trim45-203ENSMUST00000106980 3337 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
Pcdhga11Q91XY8 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Pcdhga11Q91XY8 Ntng2-201ENSMUST00000048455 1770 ntAPPRIS P4 TSL 1 (best) BASIC13.91□□□□□ -0.18
Pcdhga11Q91XY8 Gsdme-201ENSMUST00000031845 2502 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Pcdhga11Q91XY8 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Pcdhga11Q91XY8 Gm43205-201ENSMUST00000198622 1968 ntBASIC13.91□□□□□ -0.18
Pcdhga11Q91XY8 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Pcdhga11Q91XY8 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
Pcdhga11Q91XY8 Rusc1-201ENSMUST00000052539 3316 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Pcdhga11Q91XY8 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Pcdhga11Q91XY8 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Pcdhga11Q91XY8 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Pcdhga11Q91XY8 Acr-201ENSMUST00000023295 1504 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Pcdhga11Q91XY8 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Pcdhga11Q91XY8 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Pcdhga11Q91XY8 Hspa8-202ENSMUST00000117557 2019 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Pcdhga11Q91XY8 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC13.9□□□□□ -0.18
Pcdhga11Q91XY8 Myef2-207ENSMUST00000147105 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Pcdhga11Q91XY8 Mark2-201ENSMUST00000025921 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Pcdhga11Q91XY8 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Pcdhga11Q91XY8 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Pcdhga11Q91XY8 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Pcdhga11Q91XY8 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC13.9□□□□□ -0.18
Pcdhga11Q91XY8 Qdpr-204ENSMUST00000120867 1234 ntTSL 5 BASIC13.9□□□□□ -0.18
Pcdhga11Q91XY8 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
Pcdhga11Q91XY8 Mir3113-201ENSMUST00000175478 76 ntBASIC13.9□□□□□ -0.18
Pcdhga11Q91XY8 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Pcdhga11Q91XY8 Mir8117-201ENSMUST00000184773 107 ntBASIC13.9□□□□□ -0.18
Pcdhga11Q91XY8 AC225888.1-201ENSMUST00000227184 728 ntBASIC13.9□□□□□ -0.18
Pcdhga11Q91XY8 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC13.9□□□□□ -0.18
Pcdhga11Q91XY8 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC13.9□□□□□ -0.18
Pcdhga11Q91XY8 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Pcdhga11Q91XY8 Vdac3-201ENSMUST00000009036 1354 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Pcdhga11Q91XY8 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC13.9□□□□□ -0.18
Pcdhga11Q91XY8 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Pcdhga11Q91XY8 Ankrd33b-204ENSMUST00000123325 7466 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Pcdhga11Q91XY8 Gm21983-201ENSMUST00000154724 1690 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
Pcdhga11Q91XY8 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Pcdhga11Q91XY8 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
Pcdhga11Q91XY8 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Pcdhga11Q91XY8 Lgals8-203ENSMUST00000124888 2843 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Pcdhga11Q91XY8 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Pcdhga11Q91XY8 Zfp57-211ENSMUST00000174524 1747 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
Pcdhga11Q91XY8 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
Pcdhga11Q91XY8 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Pcdhga11Q91XY8 Adamts15-201ENSMUST00000065112 5928 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Pcdhga11Q91XY8 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC13.89□□□□□ -0.19
Pcdhga11Q91XY8 Rbm47-201ENSMUST00000094756 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Pcdhga11Q91XY8 Hspb7-201ENSMUST00000102486 2769 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Pcdhga11Q91XY8 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Pcdhga11Q91XY8 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Pcdhga11Q91XY8 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Pcdhga11Q91XY8 Npnt-204ENSMUST00000117164 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Pcdhga11Q91XY8 Agap1-201ENSMUST00000027521 11921 ntAPPRIS P4 TSL 1 (best) BASIC13.89□□□□□ -0.19
Pcdhga11Q91XY8 Hps1-208ENSMUST00000162004 2847 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
Pcdhga11Q91XY8 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 39.5 ms