Protein–RNA interactions for Protein: Q91XY2

Pcdhga6, Protocadherin gamma A6, mousemouse

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga6Q91XY2 Gm5566-201ENSMUST00000116118 459 ntBASIC14.33□□□□□ -0.12
Pcdhga6Q91XY2 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC14.33□□□□□ -0.12
Pcdhga6Q91XY2 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC14.33□□□□□ -0.12
Pcdhga6Q91XY2 Pigyl-201ENSMUST00000123680 695 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
Pcdhga6Q91XY2 Gm16000-201ENSMUST00000146657 447 ntTSL 2 BASIC14.33□□□□□ -0.12
Pcdhga6Q91XY2 1700029H14Rik-204ENSMUST00000151400 1216 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Pcdhga6Q91XY2 Pcgf1-202ENSMUST00000165164 918 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pcdhga6Q91XY2 Gm5149-201ENSMUST00000199768 620 ntTSL 3 BASIC14.33□□□□□ -0.12
Pcdhga6Q91XY2 Mpv17-203ENSMUST00000200833 1171 ntTSL 5 BASIC14.33□□□□□ -0.12
Pcdhga6Q91XY2 Gm45195-201ENSMUST00000205597 1008 ntBASIC14.33□□□□□ -0.12
Pcdhga6Q91XY2 Coa6-202ENSMUST00000211868 564 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pcdhga6Q91XY2 Srd5a2-201ENSMUST00000043458 854 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pcdhga6Q91XY2 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pcdhga6Q91XY2 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC14.33□□□□□ -0.12
Pcdhga6Q91XY2 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pcdhga6Q91XY2 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pcdhga6Q91XY2 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pcdhga6Q91XY2 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pcdhga6Q91XY2 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Pcdhga6Q91XY2 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pcdhga6Q91XY2 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pcdhga6Q91XY2 Reck-201ENSMUST00000030198 4433 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pcdhga6Q91XY2 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Pcdhga6Q91XY2 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pcdhga6Q91XY2 Sema6d-208ENSMUST00000103241 6157 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Pcdhga6Q91XY2 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Pcdhga6Q91XY2 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pcdhga6Q91XY2 Midn-201ENSMUST00000042057 3727 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pcdhga6Q91XY2 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pcdhga6Q91XY2 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pcdhga6Q91XY2 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
Pcdhga6Q91XY2 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pcdhga6Q91XY2 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pcdhga6Q91XY2 Syt12-201ENSMUST00000059295 3581 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pcdhga6Q91XY2 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pcdhga6Q91XY2 A430034D21Rik-201ENSMUST00000194339 1802 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Pcdhga6Q91XY2 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC14.32□□□□□ -0.12
Pcdhga6Q91XY2 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pcdhga6Q91XY2 Spaca3-202ENSMUST00000103223 947 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pcdhga6Q91XY2 Hcrt-202ENSMUST00000107360 509 ntTSL 5 BASIC14.32□□□□□ -0.12
Pcdhga6Q91XY2 Gm14042-201ENSMUST00000120139 833 ntBASIC14.32□□□□□ -0.12
Pcdhga6Q91XY2 Gm15853-201ENSMUST00000160268 556 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Pcdhga6Q91XY2 Gm15294-202ENSMUST00000182079 366 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Pcdhga6Q91XY2 Mir6420-201ENSMUST00000185032 102 ntBASIC14.32□□□□□ -0.12
Pcdhga6Q91XY2 Gm8597-201ENSMUST00000191525 1109 ntBASIC14.32□□□□□ -0.12
Pcdhga6Q91XY2 Crip2-202ENSMUST00000196015 772 ntTSL 3 BASIC14.32□□□□□ -0.12
Pcdhga6Q91XY2 Gm42902-201ENSMUST00000199508 662 ntTSL 5 BASIC14.32□□□□□ -0.12
Pcdhga6Q91XY2 Gm19265-201ENSMUST00000201818 894 ntTSL 3 BASIC14.32□□□□□ -0.12
Pcdhga6Q91XY2 Tbc1d17-209ENSMUST00000207293 692 ntTSL 3 BASIC14.32□□□□□ -0.12
Pcdhga6Q91XY2 4933405L10Rik-202ENSMUST00000211852 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pcdhga6Q91XY2 AC153937.4-201ENSMUST00000218479 661 ntTSL 3 BASIC14.32□□□□□ -0.12
Pcdhga6Q91XY2 Taf1d-201ENSMUST00000034415 1148 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pcdhga6Q91XY2 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pcdhga6Q91XY2 Phldb1-201ENSMUST00000034611 5461 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Pcdhga6Q91XY2 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pcdhga6Q91XY2 Kif5c-201ENSMUST00000028102 6856 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pcdhga6Q91XY2 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pcdhga6Q91XY2 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pcdhga6Q91XY2 Gm6263-201ENSMUST00000120029 1342 ntBASIC14.32□□□□□ -0.12
Pcdhga6Q91XY2 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC14.32□□□□□ -0.12
Pcdhga6Q91XY2 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pcdhga6Q91XY2 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pcdhga6Q91XY2 Gm29154-231ENSMUST00000215120 1367 ntTSL 5 BASIC14.32□□□□□ -0.12
Pcdhga6Q91XY2 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC14.32□□□□□ -0.12
Pcdhga6Q91XY2 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pcdhga6Q91XY2 Fam174a-202ENSMUST00000186780 3460 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pcdhga6Q91XY2 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pcdhga6Q91XY2 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Pcdhga6Q91XY2 Trim2-203ENSMUST00000107691 7428 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pcdhga6Q91XY2 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pcdhga6Q91XY2 AC159649.2-201ENSMUST00000222984 3223 ntBASIC14.32□□□□□ -0.12
Pcdhga6Q91XY2 Lenep-201ENSMUST00000057431 1806 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Pcdhga6Q91XY2 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Pcdhga6Q91XY2 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Pcdhga6Q91XY2 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pcdhga6Q91XY2 Hpcal4-202ENSMUST00000106246 1627 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Pcdhga6Q91XY2 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pcdhga6Q91XY2 Pisd-ps1-201ENSMUST00000119128 1115 ntBASIC14.31□□□□□ -0.12
Pcdhga6Q91XY2 Sf3a2-204ENSMUST00000151928 781 ntTSL 5 BASIC14.31□□□□□ -0.12
Pcdhga6Q91XY2 Gm37917-201ENSMUST00000194711 392 ntBASIC14.31□□□□□ -0.12
Pcdhga6Q91XY2 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Pcdhga6Q91XY2 Timm9-206ENSMUST00000221367 836 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Pcdhga6Q91XY2 Shd-206ENSMUST00000225145 998 ntBASIC14.31□□□□□ -0.12
Pcdhga6Q91XY2 Nacad-201ENSMUST00000045713 4892 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pcdhga6Q91XY2 Pcyt1a-202ENSMUST00000104893 4951 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Pcdhga6Q91XY2 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pcdhga6Q91XY2 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC14.31□□□□□ -0.12
Pcdhga6Q91XY2 Plekha1-202ENSMUST00000075181 2301 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pcdhga6Q91XY2 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pcdhga6Q91XY2 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Pcdhga6Q91XY2 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pcdhga6Q91XY2 Serpine3-201ENSMUST00000171692 1402 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pcdhga6Q91XY2 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Pcdhga6Q91XY2 1810008I18Rik-201ENSMUST00000185464 2419 ntBASIC14.31□□□□□ -0.12
Pcdhga6Q91XY2 Ldb3-207ENSMUST00000227819 1499 ntBASIC14.31□□□□□ -0.12
Pcdhga6Q91XY2 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pcdhga6Q91XY2 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Pcdhga6Q91XY2 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Pcdhga6Q91XY2 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Pcdhga6Q91XY2 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 32.7 ms