Protein–RNA interactions for Protein: Q8VC85

Lsm1, U6 snRNA-associated Sm-like protein LSm1, mousemouse

Predictions only

Length 133 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm1Q8VC85 Gapdh-203ENSMUST00000118875 1420 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Lsm1Q8VC85 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Lsm1Q8VC85 P4hb-201ENSMUST00000026122 2861 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Lsm1Q8VC85 Tpr-203ENSMUST00000124973 7430 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Lsm1Q8VC85 Chtop-206ENSMUST00000107344 2972 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Lsm1Q8VC85 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Lsm1Q8VC85 Cdcp2-202ENSMUST00000221740 1623 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
Lsm1Q8VC85 Gm6159-201ENSMUST00000191249 1724 ntBASIC13.78□□□□□ -0.2
Lsm1Q8VC85 Gm29253-201ENSMUST00000185727 5231 ntTSL 5 BASIC13.78□□□□□ -0.2
Lsm1Q8VC85 Rcbtb1-202ENSMUST00000043227 3903 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Lsm1Q8VC85 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Lsm1Q8VC85 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Lsm1Q8VC85 Gm37019-201ENSMUST00000192133 2134 ntBASIC13.78□□□□□ -0.2
Lsm1Q8VC85 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Lsm1Q8VC85 Slc4a1ap-213ENSMUST00000202950 2499 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
Lsm1Q8VC85 Epb41l1-202ENSMUST00000103135 6177 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.2
Lsm1Q8VC85 Arpc1b-201ENSMUST00000085679 3105 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.2
Lsm1Q8VC85 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.2
Lsm1Q8VC85 Flt4-201ENSMUST00000020617 6255 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Lsm1Q8VC85 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Lsm1Q8VC85 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Lsm1Q8VC85 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
Lsm1Q8VC85 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Lsm1Q8VC85 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC13.77□□□□□ -0.21
Lsm1Q8VC85 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Lsm1Q8VC85 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Lsm1Q8VC85 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC13.77□□□□□ -0.21
Lsm1Q8VC85 Rpph1-201ENSMUST00000175096 319 ntBASIC13.77□□□□□ -0.21
Lsm1Q8VC85 Mzf1-204ENSMUST00000182490 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Lsm1Q8VC85 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC13.77□□□□□ -0.21
Lsm1Q8VC85 Anks1b-231ENSMUST00000183136 2786 ntTSL 5 BASIC13.77□□□□□ -0.21
Lsm1Q8VC85 Tmem86b-202ENSMUST00000205360 1344 ntTSL 2 BASIC13.77□□□□□ -0.21
Lsm1Q8VC85 Iah1-204ENSMUST00000223345 1890 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Lsm1Q8VC85 AC164107.1-201ENSMUST00000227730 2161 ntBASIC13.77□□□□□ -0.21
Lsm1Q8VC85 Mzt1-203ENSMUST00000227948 952 ntBASIC13.77□□□□□ -0.21
Lsm1Q8VC85 Tm9sf1-201ENSMUST00000002391 2382 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Lsm1Q8VC85 Vasp-201ENSMUST00000032561 2215 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Lsm1Q8VC85 Trf-201ENSMUST00000035158 2571 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Lsm1Q8VC85 Mtmr7-202ENSMUST00000048898 2488 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Lsm1Q8VC85 Mrps9-201ENSMUST00000057208 1418 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Lsm1Q8VC85 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Lsm1Q8VC85 Olfr520-201ENSMUST00000098264 951 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
Lsm1Q8VC85 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Lsm1Q8VC85 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Lsm1Q8VC85 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Lsm1Q8VC85 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC13.77□□□□□ -0.21
Lsm1Q8VC85 Ick-203ENSMUST00000117330 2698 ntAPPRIS ALT2 TSL 2 BASIC13.77□□□□□ -0.21
Lsm1Q8VC85 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Lsm1Q8VC85 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Lsm1Q8VC85 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
Lsm1Q8VC85 Gins3-201ENSMUST00000034094 2519 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Lsm1Q8VC85 Kcnj12-201ENSMUST00000041944 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Lsm1Q8VC85 Gm19863-201ENSMUST00000192480 2218 ntBASIC13.76□□□□□ -0.21
Lsm1Q8VC85 Cpne6-202ENSMUST00000163767 2004 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
Lsm1Q8VC85 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Lsm1Q8VC85 Hsd3b7-203ENSMUST00000106272 1725 ntTSL 5 BASIC13.76□□□□□ -0.21
Lsm1Q8VC85 Slc8a3-203ENSMUST00000182208 3433 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
Lsm1Q8VC85 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Lsm1Q8VC85 Mapk7-202ENSMUST00000101085 3254 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Lsm1Q8VC85 Arhgap8-205ENSMUST00000168811 1464 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Lsm1Q8VC85 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC13.76□□□□□ -0.21
Lsm1Q8VC85 Scp2-201ENSMUST00000030340 2640 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Lsm1Q8VC85 Mrpl58-209ENSMUST00000153983 2596 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Lsm1Q8VC85 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Lsm1Q8VC85 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
Lsm1Q8VC85 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Lsm1Q8VC85 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Lsm1Q8VC85 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC13.76□□□□□ -0.21
Lsm1Q8VC85 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC13.76□□□□□ -0.21
Lsm1Q8VC85 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC13.76□□□□□ -0.21
Lsm1Q8VC85 Gm27920-201ENSMUST00000183953 96 ntBASIC13.76□□□□□ -0.21
Lsm1Q8VC85 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
Lsm1Q8VC85 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Lsm1Q8VC85 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Lsm1Q8VC85 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Lsm1Q8VC85 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Lsm1Q8VC85 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC13.76□□□□□ -0.21
Lsm1Q8VC85 Rbbp5-206ENSMUST00000190825 2456 ntAPPRIS ALT1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Lsm1Q8VC85 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Lsm1Q8VC85 Ppip5k2-201ENSMUST00000042509 5882 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Lsm1Q8VC85 Gm9918-201ENSMUST00000181801 2192 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Lsm1Q8VC85 Erich6-201ENSMUST00000041115 2195 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
Lsm1Q8VC85 Pars2-201ENSMUST00000058905 2191 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
Lsm1Q8VC85 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Lsm1Q8VC85 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
Lsm1Q8VC85 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Lsm1Q8VC85 Taf7l-201ENSMUST00000009740 1933 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Lsm1Q8VC85 Pde8a-201ENSMUST00000026672 3802 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Lsm1Q8VC85 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Lsm1Q8VC85 Phgdh-201ENSMUST00000065793 1893 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Lsm1Q8VC85 Palm-201ENSMUST00000046945 2651 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Lsm1Q8VC85 Ankrd34b-203ENSMUST00000168871 3397 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Lsm1Q8VC85 Sntb2-203ENSMUST00000212524 9945 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Lsm1Q8VC85 Cd3d-201ENSMUST00000034602 1617 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Lsm1Q8VC85 4632428C04Rik-201ENSMUST00000181485 2430 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Lsm1Q8VC85 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Lsm1Q8VC85 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Lsm1Q8VC85 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Lsm1Q8VC85 Kctd14-206ENSMUST00000206658 2339 ntAPPRIS P3 TSL 3 BASIC13.75□□□□□ -0.21
Lsm1Q8VC85 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 26.9 ms