Protein–RNA interactions for Protein: Q8CDV4

Trim52, Tripartite motif-containing 52, mousemouse

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim52Q8CDV4 Defb30-203ENSMUST00000111208 503 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trim52Q8CDV4 Defb30-204ENSMUST00000111209 721 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trim52Q8CDV4 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC17.62■□□□□ 0.41
Trim52Q8CDV4 Gm9002-201ENSMUST00000178437 499 ntBASIC17.62■□□□□ 0.41
Trim52Q8CDV4 Gm37667-201ENSMUST00000193103 752 ntTSL 5 BASIC17.62■□□□□ 0.41
Trim52Q8CDV4 Aqp10-ps-201ENSMUST00000199555 611 ntBASIC17.62■□□□□ 0.41
Trim52Q8CDV4 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC17.62■□□□□ 0.41
Trim52Q8CDV4 Ndufs6-201ENSMUST00000022097 568 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trim52Q8CDV4 Cmc2-201ENSMUST00000078589 523 ntTSL 2 BASIC17.62■□□□□ 0.41
Trim52Q8CDV4 Ap2s1-201ENSMUST00000086112 836 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trim52Q8CDV4 Tada3-203ENSMUST00000099118 1282 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Trim52Q8CDV4 Kcng1-201ENSMUST00000099069 2316 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trim52Q8CDV4 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trim52Q8CDV4 Gm15557-201ENSMUST00000109629 1380 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Trim52Q8CDV4 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trim52Q8CDV4 R3hcc1-202ENSMUST00000121142 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trim52Q8CDV4 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
Trim52Q8CDV4 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trim52Q8CDV4 Kcnq1-202ENSMUST00000185383 1535 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Trim52Q8CDV4 Acr-201ENSMUST00000023295 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trim52Q8CDV4 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trim52Q8CDV4 Dnajc5g-201ENSMUST00000066544 1565 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trim52Q8CDV4 Krt36-201ENSMUST00000107416 1671 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
Trim52Q8CDV4 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trim52Q8CDV4 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trim52Q8CDV4 Men1-207ENSMUST00000113503 1851 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Trim52Q8CDV4 Fggy-202ENSMUST00000079223 1891 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
Trim52Q8CDV4 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
Trim52Q8CDV4 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trim52Q8CDV4 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trim52Q8CDV4 Gm10369-201ENSMUST00000100641 1148 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Trim52Q8CDV4 Gm11723-201ENSMUST00000155505 466 ntTSL 3 BASIC17.61■□□□□ 0.41
Trim52Q8CDV4 Gm17634-201ENSMUST00000181383 1285 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Trim52Q8CDV4 Ighv1-51-201ENSMUST00000192903 354 ntBASIC17.61■□□□□ 0.41
Trim52Q8CDV4 Gm32926-202ENSMUST00000215162 1176 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Trim52Q8CDV4 Tnfrsf19-205ENSMUST00000225730 744 ntAPPRIS ALT2 BASIC17.61■□□□□ 0.41
Trim52Q8CDV4 AC150560.1-201ENSMUST00000227731 1187 ntBASIC17.61■□□□□ 0.41
Trim52Q8CDV4 Trappc4-201ENSMUST00000034623 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trim52Q8CDV4 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trim52Q8CDV4 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Trim52Q8CDV4 Celf4-203ENSMUST00000223704 2492 ntAPPRIS ALT1 BASIC17.61■□□□□ 0.41
Trim52Q8CDV4 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trim52Q8CDV4 Slc25a19-212ENSMUST00000178003 2614 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
Trim52Q8CDV4 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trim52Q8CDV4 Mvk-202ENSMUST00000112239 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trim52Q8CDV4 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
Trim52Q8CDV4 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trim52Q8CDV4 Itpk1-201ENSMUST00000046518 2918 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trim52Q8CDV4 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trim52Q8CDV4 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trim52Q8CDV4 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Trim52Q8CDV4 Syt6-203ENSMUST00000118117 1856 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Trim52Q8CDV4 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC17.6■□□□□ 0.41
Trim52Q8CDV4 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
Trim52Q8CDV4 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Trim52Q8CDV4 9130008F23Rik-201ENSMUST00000068258 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trim52Q8CDV4 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Trim52Q8CDV4 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trim52Q8CDV4 Zkscan3-208ENSMUST00000224820 5398 ntBASIC17.6■□□□□ 0.41
Trim52Q8CDV4 Rhobtb1-210ENSMUST00000167384 2331 ntTSL 5 BASIC17.6■□□□□ 0.41
Trim52Q8CDV4 Kcnj8-202ENSMUST00000203945 2548 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trim52Q8CDV4 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trim52Q8CDV4 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trim52Q8CDV4 Gm11557-201ENSMUST00000120200 1008 ntBASIC17.6■□□□□ 0.41
Trim52Q8CDV4 Gm15755-201ENSMUST00000133698 659 ntTSL 3 BASIC17.6■□□□□ 0.41
Trim52Q8CDV4 Klk12-201ENSMUST00000014063 924 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trim52Q8CDV4 Gm6460-202ENSMUST00000163787 821 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trim52Q8CDV4 Gm8879-201ENSMUST00000170260 1125 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Trim52Q8CDV4 4933402N22Rik-202ENSMUST00000170301 1092 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trim52Q8CDV4 Gm8927-201ENSMUST00000181978 981 ntBASIC17.6■□□□□ 0.41
Trim52Q8CDV4 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC17.6■□□□□ 0.41
Trim52Q8CDV4 Gm19078-201ENSMUST00000206311 727 ntBASIC17.6■□□□□ 0.41
Trim52Q8CDV4 1700067P10Rik-201ENSMUST00000022028 794 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trim52Q8CDV4 Gm7446-201ENSMUST00000221035 1240 ntBASIC17.6■□□□□ 0.41
Trim52Q8CDV4 AC149294.4-201ENSMUST00000227870 882 ntBASIC17.6■□□□□ 0.41
Trim52Q8CDV4 Swi5-201ENSMUST00000050410 775 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trim52Q8CDV4 Gm3222-201ENSMUST00000071282 990 ntBASIC17.6■□□□□ 0.41
Trim52Q8CDV4 Ifi27-202ENSMUST00000076702 828 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trim52Q8CDV4 Gm25857-201ENSMUST00000082788 129 ntBASIC17.6■□□□□ 0.41
Trim52Q8CDV4 Tex13c3-201ENSMUST00000089246 876 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trim52Q8CDV4 Mir497b-201ENSMUST00000093601 125 ntBASIC17.6■□□□□ 0.41
Trim52Q8CDV4 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC17.6■□□□□ 0.41
Trim52Q8CDV4 Gm42471-201ENSMUST00000201457 1865 ntBASIC17.6■□□□□ 0.41
Trim52Q8CDV4 Pde4d-203ENSMUST00000117420 1955 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Trim52Q8CDV4 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Trim52Q8CDV4 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trim52Q8CDV4 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trim52Q8CDV4 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trim52Q8CDV4 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
Trim52Q8CDV4 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trim52Q8CDV4 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC17.59■□□□□ 0.41
Trim52Q8CDV4 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trim52Q8CDV4 Gm16425-201ENSMUST00000118143 3130 ntBASIC17.59■□□□□ 0.41
Trim52Q8CDV4 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Trim52Q8CDV4 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trim52Q8CDV4 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC17.59■□□□□ 0.41
Trim52Q8CDV4 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Trim52Q8CDV4 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trim52Q8CDV4 Pdpn-201ENSMUST00000030317 1817 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trim52Q8CDV4 Gm44645-201ENSMUST00000205492 1653 ntBASIC17.59■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 26.6 ms