Protein–RNA interactions for Protein: Q8CDD9

Lrif1, Ligand-dependent nuclear receptor-interacting factor 1, mousemouse

Predictions only

Length 755 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrif1Q8CDD9 Speg-205ENSMUST00000113590 3393 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Lrif1Q8CDD9 Col25a1-201ENSMUST00000080335 2624 ntAPPRIS P4 TSL 5 BASIC14.23□□□□□ -0.13
Lrif1Q8CDD9 March8-213ENSMUST00000203193 4245 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Lrif1Q8CDD9 Men1-207ENSMUST00000113503 1851 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Lrif1Q8CDD9 Dagla-201ENSMUST00000039327 5634 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Lrif1Q8CDD9 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Lrif1Q8CDD9 Arl6ip6-201ENSMUST00000028336 2548 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Lrif1Q8CDD9 Acadm-201ENSMUST00000072697 2047 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Lrif1Q8CDD9 Palm-201ENSMUST00000046945 2651 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Lrif1Q8CDD9 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Lrif1Q8CDD9 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Lrif1Q8CDD9 Ncdn-202ENSMUST00000106116 2434 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Lrif1Q8CDD9 Plxdc1-203ENSMUST00000107565 2439 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Lrif1Q8CDD9 Pgr-201ENSMUST00000070463 3068 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Lrif1Q8CDD9 Pgr-202ENSMUST00000098986 3068 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Lrif1Q8CDD9 Pak4-201ENSMUST00000032823 2611 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Lrif1Q8CDD9 Zfp318-204ENSMUST00000138127 3936 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Lrif1Q8CDD9 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Lrif1Q8CDD9 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Lrif1Q8CDD9 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC14.22□□□□□ -0.13
Lrif1Q8CDD9 Gm15467-201ENSMUST00000120582 445 ntBASIC14.22□□□□□ -0.13
Lrif1Q8CDD9 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC14.22□□□□□ -0.13
Lrif1Q8CDD9 Gm2213-201ENSMUST00000197485 688 ntBASIC14.22□□□□□ -0.13
Lrif1Q8CDD9 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC14.22□□□□□ -0.13
Lrif1Q8CDD9 Gm45683-201ENSMUST00000210825 1247 ntBASIC14.22□□□□□ -0.13
Lrif1Q8CDD9 AC132104.2-201ENSMUST00000215011 266 ntBASIC14.22□□□□□ -0.13
Lrif1Q8CDD9 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC14.22□□□□□ -0.13
Lrif1Q8CDD9 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC14.22□□□□□ -0.13
Lrif1Q8CDD9 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Lrif1Q8CDD9 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Lrif1Q8CDD9 Mpzl2-201ENSMUST00000034600 3107 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Lrif1Q8CDD9 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Lrif1Q8CDD9 Syt1-201ENSMUST00000064054 4745 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Lrif1Q8CDD9 Zbed4-201ENSMUST00000041297 5425 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Lrif1Q8CDD9 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Lrif1Q8CDD9 Cacng3-201ENSMUST00000084615 2777 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Lrif1Q8CDD9 Gm12626-201ENSMUST00000117339 1983 ntBASIC14.22□□□□□ -0.13
Lrif1Q8CDD9 Gm12623-201ENSMUST00000119849 1983 ntBASIC14.22□□□□□ -0.13
Lrif1Q8CDD9 Evc-201ENSMUST00000031005 4325 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Lrif1Q8CDD9 Ccp110-202ENSMUST00000106557 5073 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Lrif1Q8CDD9 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Lrif1Q8CDD9 Kcng1-201ENSMUST00000099069 2316 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Lrif1Q8CDD9 Il1rapl2-202ENSMUST00000113063 3437 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Lrif1Q8CDD9 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Lrif1Q8CDD9 Iah1-204ENSMUST00000223345 1890 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Lrif1Q8CDD9 Tnk2-201ENSMUST00000115120 2794 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Lrif1Q8CDD9 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC14.21□□□□□ -0.13
Lrif1Q8CDD9 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Lrif1Q8CDD9 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Lrif1Q8CDD9 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Lrif1Q8CDD9 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
Lrif1Q8CDD9 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Lrif1Q8CDD9 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
Lrif1Q8CDD9 Gm27628-201ENSMUST00000184911 107 ntBASIC14.21□□□□□ -0.13
Lrif1Q8CDD9 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC14.21□□□□□ -0.13
Lrif1Q8CDD9 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Lrif1Q8CDD9 AC159106.1-201ENSMUST00000224421 690 ntBASIC14.21□□□□□ -0.13
Lrif1Q8CDD9 AC155729.1-201ENSMUST00000227758 544 ntBASIC14.21□□□□□ -0.13
Lrif1Q8CDD9 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Lrif1Q8CDD9 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
Lrif1Q8CDD9 Ngef-201ENSMUST00000027477 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Lrif1Q8CDD9 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Lrif1Q8CDD9 Rxra-203ENSMUST00000113934 1989 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Lrif1Q8CDD9 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC14.21□□□□□ -0.13
Lrif1Q8CDD9 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Lrif1Q8CDD9 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
Lrif1Q8CDD9 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Lrif1Q8CDD9 Me2-201ENSMUST00000025439 2455 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Lrif1Q8CDD9 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Lrif1Q8CDD9 Slc52a3-202ENSMUST00000109858 2094 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Lrif1Q8CDD9 Mpl-201ENSMUST00000006556 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Lrif1Q8CDD9 Keap1-202ENSMUST00000164812 3614 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Lrif1Q8CDD9 Car10-203ENSMUST00000107858 2742 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Lrif1Q8CDD9 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Lrif1Q8CDD9 Ak1-201ENSMUST00000068271 2034 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Lrif1Q8CDD9 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Lrif1Q8CDD9 Slfn2-201ENSMUST00000038038 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Lrif1Q8CDD9 Trim45-203ENSMUST00000106980 3337 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Lrif1Q8CDD9 Slc38a7-204ENSMUST00000212270 3315 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Lrif1Q8CDD9 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Lrif1Q8CDD9 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Lrif1Q8CDD9 Zfp36l1-201ENSMUST00000021552 2990 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Lrif1Q8CDD9 Samhd1-202ENSMUST00000088523 1996 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Lrif1Q8CDD9 Ppp3cb-205ENSMUST00000161445 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Lrif1Q8CDD9 Slc8b1-203ENSMUST00000111889 1624 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Lrif1Q8CDD9 Scfd2-203ENSMUST00000113542 2279 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Lrif1Q8CDD9 Cnnm2-202ENSMUST00000099373 3558 ntAPPRIS P4 TSL 1 (best) BASIC14.2□□□□□ -0.14
Lrif1Q8CDD9 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Lrif1Q8CDD9 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Lrif1Q8CDD9 Hsph1-201ENSMUST00000074846 3240 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Lrif1Q8CDD9 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Lrif1Q8CDD9 Zfp367-201ENSMUST00000059817 3532 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Lrif1Q8CDD9 Gm9727-201ENSMUST00000161387 555 ntBASIC14.2□□□□□ -0.14
Lrif1Q8CDD9 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Lrif1Q8CDD9 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC14.2□□□□□ -0.14
Lrif1Q8CDD9 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC14.2□□□□□ -0.14
Lrif1Q8CDD9 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC14.2□□□□□ -0.14
Lrif1Q8CDD9 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC14.2□□□□□ -0.14
Lrif1Q8CDD9 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Lrif1Q8CDD9 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC14.2□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 29.7 ms