Protein–RNA interactions for Protein: Q8CA71

Shisa4, Protein shisa-4, mousemouse

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa4Q8CA71 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Shisa4Q8CA71 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Shisa4Q8CA71 Gpc5-201ENSMUST00000022707 1719 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Shisa4Q8CA71 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Shisa4Q8CA71 Dhrs1-201ENSMUST00000002403 1477 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Shisa4Q8CA71 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Shisa4Q8CA71 N4bp3-201ENSMUST00000001080 2367 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Shisa4Q8CA71 Ppt2-202ENSMUST00000166040 1139 ntAPPRIS P1 TSL 3 BASIC16.62■□□□□ 0.25
Shisa4Q8CA71 1010001B22Rik-201ENSMUST00000181488 589 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Shisa4Q8CA71 Gm26808-201ENSMUST00000181569 411 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Shisa4Q8CA71 Mir8102-201ENSMUST00000184148 139 ntBASIC16.62■□□□□ 0.25
Shisa4Q8CA71 2410002F23Rik-214ENSMUST00000186606 748 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Shisa4Q8CA71 Myl6b-201ENSMUST00000026428 1026 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Shisa4Q8CA71 Myoz3-201ENSMUST00000056533 870 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Shisa4Q8CA71 Pdlim7-203ENSMUST00000069968 1006 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Shisa4Q8CA71 Obp2a-201ENSMUST00000077667 744 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Shisa4Q8CA71 Il2rb-202ENSMUST00000163494 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Shisa4Q8CA71 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Shisa4Q8CA71 Fam151a-201ENSMUST00000047620 1923 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Shisa4Q8CA71 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Shisa4Q8CA71 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Shisa4Q8CA71 AC126549.2-201ENSMUST00000223997 1976 ntBASIC16.62■□□□□ 0.25
Shisa4Q8CA71 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Shisa4Q8CA71 Psmd8-202ENSMUST00000182328 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Shisa4Q8CA71 Rplp0-201ENSMUST00000086519 1358 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Shisa4Q8CA71 A230077H06Rik-201ENSMUST00000188579 2918 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Shisa4Q8CA71 Gm15850-201ENSMUST00000134998 2049 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Shisa4Q8CA71 Mapk7-202ENSMUST00000101085 3254 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Shisa4Q8CA71 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Shisa4Q8CA71 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC16.62■□□□□ 0.25
Shisa4Q8CA71 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Shisa4Q8CA71 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC16.61■□□□□ 0.25
Shisa4Q8CA71 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Shisa4Q8CA71 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Shisa4Q8CA71 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Shisa4Q8CA71 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Shisa4Q8CA71 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Shisa4Q8CA71 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Shisa4Q8CA71 Apoo-203ENSMUST00000113897 1218 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Shisa4Q8CA71 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Shisa4Q8CA71 Gm11773-201ENSMUST00000138256 497 ntTSL 2 BASIC16.61■□□□□ 0.25
Shisa4Q8CA71 Spata3-209ENSMUST00000152501 743 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Shisa4Q8CA71 2700012I20Rik-201ENSMUST00000180525 684 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Shisa4Q8CA71 Gm28942-201ENSMUST00000186334 365 ntTSL 3 BASIC16.61■□□□□ 0.25
Shisa4Q8CA71 Gm44608-201ENSMUST00000206827 855 ntBASIC16.61■□□□□ 0.25
Shisa4Q8CA71 Gm9229-201ENSMUST00000222777 126 ntBASIC16.61■□□□□ 0.25
Shisa4Q8CA71 Cela1-201ENSMUST00000023775 1103 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Shisa4Q8CA71 Cript-201ENSMUST00000024959 1184 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Shisa4Q8CA71 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC16.61■□□□□ 0.25
Shisa4Q8CA71 Ufsp1-201ENSMUST00000052825 1037 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
Shisa4Q8CA71 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Shisa4Q8CA71 Prss38-201ENSMUST00000061481 1243 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Shisa4Q8CA71 Rps15-201ENSMUST00000062674 572 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Shisa4Q8CA71 Syvn1-201ENSMUST00000025723 2780 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Shisa4Q8CA71 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Shisa4Q8CA71 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Shisa4Q8CA71 Ppp1r15a-202ENSMUST00000167273 2809 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
Shisa4Q8CA71 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC16.61■□□□□ 0.25
Shisa4Q8CA71 Irf7-203ENSMUST00000106023 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Shisa4Q8CA71 Adk-207ENSMUST00000224069 1818 ntAPPRIS ALT1 BASIC16.61■□□□□ 0.25
Shisa4Q8CA71 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
Shisa4Q8CA71 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Shisa4Q8CA71 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Shisa4Q8CA71 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Shisa4Q8CA71 Tmem101-201ENSMUST00000021296 1574 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Shisa4Q8CA71 Crem-201ENSMUST00000025069 2931 ntTSL 5 BASIC16.6■□□□□ 0.25
Shisa4Q8CA71 Klhl12-203ENSMUST00000116528 3277 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Shisa4Q8CA71 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Shisa4Q8CA71 Gm16137-201ENSMUST00000161571 664 ntTSL 5 BASIC16.6■□□□□ 0.25
Shisa4Q8CA71 Gm17409-201ENSMUST00000167423 962 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
Shisa4Q8CA71 Dap-204ENSMUST00000186425 597 ntTSL 3 BASIC16.6■□□□□ 0.25
Shisa4Q8CA71 Bet1l-209ENSMUST00000211624 769 ntTSL 3 BASIC16.6■□□□□ 0.25
Shisa4Q8CA71 Gm7653-201ENSMUST00000214567 508 ntBASIC16.6■□□□□ 0.25
Shisa4Q8CA71 Calml4-201ENSMUST00000034777 864 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Shisa4Q8CA71 Rec114-201ENSMUST00000098674 883 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Shisa4Q8CA71 Mypn-202ENSMUST00000218978 1833 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Shisa4Q8CA71 Rad17-202ENSMUST00000177848 2392 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Shisa4Q8CA71 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC16.6■□□□□ 0.25
Shisa4Q8CA71 Epsti1-201ENSMUST00000022591 1870 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Shisa4Q8CA71 Plekhb1-206ENSMUST00000107047 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Shisa4Q8CA71 Pef1-202ENSMUST00000118199 1915 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Shisa4Q8CA71 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Shisa4Q8CA71 Dhdds-204ENSMUST00000105887 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Shisa4Q8CA71 Sept1-202ENSMUST00000106314 1486 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Shisa4Q8CA71 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Shisa4Q8CA71 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Shisa4Q8CA71 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Shisa4Q8CA71 Gtf2h4-207ENSMUST00000160734 1569 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Shisa4Q8CA71 Mettl7a3-201ENSMUST00000075420 1618 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Shisa4Q8CA71 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
Shisa4Q8CA71 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Shisa4Q8CA71 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Shisa4Q8CA71 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
Shisa4Q8CA71 Gnb5-202ENSMUST00000213990 1803 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Shisa4Q8CA71 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Shisa4Q8CA71 Ffar2-202ENSMUST00000163504 1913 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
Shisa4Q8CA71 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Shisa4Q8CA71 Wls-205ENSMUST00000198878 2050 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Shisa4Q8CA71 Dusp13-203ENSMUST00000120956 1070 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Shisa4Q8CA71 Gm14719-201ENSMUST00000121891 340 ntBASIC16.59■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 40.2 ms