Protein–RNA interactions for Protein: Q8C120

Sh3rf3, SH3 domain-containing RING finger protein 3, mousemouse

Predictions only

Length 878 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf3Q8C120 2810402E24Rik-201ENSMUST00000190699 3040 ntBASIC15□□□□□ -0.01
Sh3rf3Q8C120 Gm44981-201ENSMUST00000205549 1943 ntBASIC15□□□□□ -0.01
Sh3rf3Q8C120 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
Sh3rf3Q8C120 Sh3bp5-201ENSMUST00000091903 2684 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
Sh3rf3Q8C120 Ubap1l-201ENSMUST00000147185 1380 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
Sh3rf3Q8C120 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Sh3rf3Q8C120 Gm6756-201ENSMUST00000180647 1620 ntBASIC14.99□□□□□ -0.01
Sh3rf3Q8C120 Olfr683-202ENSMUST00000209879 3841 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
Sh3rf3Q8C120 Tpd52-203ENSMUST00000091355 3081 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Sh3rf3Q8C120 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Sh3rf3Q8C120 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
Sh3rf3Q8C120 Cyp20a1-201ENSMUST00000060608 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Sh3rf3Q8C120 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Sh3rf3Q8C120 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Sh3rf3Q8C120 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Sh3rf3Q8C120 Gm27494-201ENSMUST00000184735 189 ntBASIC14.99□□□□□ -0.01
Sh3rf3Q8C120 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC14.99□□□□□ -0.01
Sh3rf3Q8C120 Ndufaf2-202ENSMUST00000223734 556 ntBASIC14.99□□□□□ -0.01
Sh3rf3Q8C120 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
Sh3rf3Q8C120 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Sh3rf3Q8C120 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Sh3rf3Q8C120 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Sh3rf3Q8C120 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Sh3rf3Q8C120 AC148324.1-201ENSMUST00000219034 4240 ntBASIC14.99□□□□□ -0.01
Sh3rf3Q8C120 Ntrk2-209ENSMUST00000225950 2640 ntBASIC14.99□□□□□ -0.01
Sh3rf3Q8C120 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Sh3rf3Q8C120 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Sh3rf3Q8C120 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Sh3rf3Q8C120 Tcf4-248ENSMUST00000202354 2120 ntTSL 5 BASIC14.99□□□□□ -0.01
Sh3rf3Q8C120 Tcf4-257ENSMUST00000202772 2125 ntTSL 5 BASIC14.99□□□□□ -0.01
Sh3rf3Q8C120 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
Sh3rf3Q8C120 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
Sh3rf3Q8C120 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Sh3rf3Q8C120 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Sh3rf3Q8C120 Slc5a2-202ENSMUST00000118169 2277 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Sh3rf3Q8C120 Crem-201ENSMUST00000025069 2931 ntTSL 5 BASIC14.99□□□□□ -0.01
Sh3rf3Q8C120 Tgif2-201ENSMUST00000073352 2690 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Sh3rf3Q8C120 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Sh3rf3Q8C120 Tuft1-203ENSMUST00000196655 2156 ntTSL 5 BASIC14.98□□□□□ -0.01
Sh3rf3Q8C120 Matn2-206ENSMUST00000228570 2798 ntBASIC14.98□□□□□ -0.01
Sh3rf3Q8C120 Rbm47-201ENSMUST00000094756 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Sh3rf3Q8C120 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Sh3rf3Q8C120 Krit1-211ENSMUST00000200386 2343 ntTSL 5 BASIC14.98□□□□□ -0.01
Sh3rf3Q8C120 Pxdn-201ENSMUST00000118321 2698 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Sh3rf3Q8C120 Zpbp2-201ENSMUST00000017339 1455 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
Sh3rf3Q8C120 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Sh3rf3Q8C120 Gm11543-201ENSMUST00000120758 370 ntBASIC14.98□□□□□ -0.01
Sh3rf3Q8C120 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Sh3rf3Q8C120 Gm11682-201ENSMUST00000144689 516 ntTSL 3 BASIC14.98□□□□□ -0.01
Sh3rf3Q8C120 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC14.98□□□□□ -0.01
Sh3rf3Q8C120 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
Sh3rf3Q8C120 Cd3g-201ENSMUST00000002101 1023 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Sh3rf3Q8C120 Gm9182-201ENSMUST00000217829 639 ntBASIC14.98□□□□□ -0.01
Sh3rf3Q8C120 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Sh3rf3Q8C120 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Sh3rf3Q8C120 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Sh3rf3Q8C120 Ubqln2-201ENSMUST00000060714 3344 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
Sh3rf3Q8C120 Nudt18-203ENSMUST00000228768 1578 ntBASIC14.98□□□□□ -0.01
Sh3rf3Q8C120 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Sh3rf3Q8C120 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Sh3rf3Q8C120 Map2k6-201ENSMUST00000020949 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Sh3rf3Q8C120 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Sh3rf3Q8C120 Trf-201ENSMUST00000035158 2571 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Sh3rf3Q8C120 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Sh3rf3Q8C120 Arhgap4-204ENSMUST00000114406 2749 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Sh3rf3Q8C120 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
Sh3rf3Q8C120 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC14.97□□□□□ -0.01
Sh3rf3Q8C120 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC14.97□□□□□ -0.01
Sh3rf3Q8C120 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC14.97□□□□□ -0.01
Sh3rf3Q8C120 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC14.97□□□□□ -0.01
Sh3rf3Q8C120 Rprl2-201ENSMUST00000157150 290 ntBASIC14.97□□□□□ -0.01
Sh3rf3Q8C120 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC14.97□□□□□ -0.01
Sh3rf3Q8C120 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC14.97□□□□□ -0.01
Sh3rf3Q8C120 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Sh3rf3Q8C120 Tmod4-201ENSMUST00000005769 1242 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Sh3rf3Q8C120 Scarf1-202ENSMUST00000118243 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Sh3rf3Q8C120 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Sh3rf3Q8C120 4632404H12Rik-201ENSMUST00000038450 2791 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Sh3rf3Q8C120 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Sh3rf3Q8C120 Dnajb12-205ENSMUST00000147914 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Sh3rf3Q8C120 Avpr1a-201ENSMUST00000020323 2670 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Sh3rf3Q8C120 Pgap2-225ENSMUST00000156529 2034 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Sh3rf3Q8C120 Tmem204-201ENSMUST00000024984 1846 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Sh3rf3Q8C120 Pak1-205ENSMUST00000206984 2794 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
Sh3rf3Q8C120 Abi3-201ENSMUST00000059026 4006 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Sh3rf3Q8C120 2810006K23Rik-202ENSMUST00000111477 1637 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Sh3rf3Q8C120 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Sh3rf3Q8C120 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC14.96□□□□□ -0.01
Sh3rf3Q8C120 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Sh3rf3Q8C120 Fbxo8-202ENSMUST00000110322 1709 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Sh3rf3Q8C120 Ctu2-201ENSMUST00000116412 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Sh3rf3Q8C120 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Sh3rf3Q8C120 Gm18889-201ENSMUST00000174284 929 ntBASIC14.96□□□□□ -0.01
Sh3rf3Q8C120 Gm17619-201ENSMUST00000180625 1449 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Sh3rf3Q8C120 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC14.96□□□□□ -0.01
Sh3rf3Q8C120 Trim68-205ENSMUST00000210855 2301 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Sh3rf3Q8C120 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC14.96□□□□□ -0.01
Sh3rf3Q8C120 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC14.96□□□□□ -0.01
Sh3rf3Q8C120 Aste1-201ENSMUST00000035181 2755 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
Sh3rf3Q8C120 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 34.7 ms