Protein–RNA interactions for Protein: Q7TQI3

Otub1, Ubiquitin thioesterase OTUB1, mousemouse

Predictions only

Length 271 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Otub1Q7TQI3 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Otub1Q7TQI3 Poli-202ENSMUST00000121674 2778 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Otub1Q7TQI3 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Otub1Q7TQI3 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Otub1Q7TQI3 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Otub1Q7TQI3 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Otub1Q7TQI3 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC13.68□□□□□ -0.22
Otub1Q7TQI3 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC13.68□□□□□ -0.22
Otub1Q7TQI3 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Otub1Q7TQI3 Epha1-201ENSMUST00000073387 3273 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Otub1Q7TQI3 Aimp2-202ENSMUST00000100483 1073 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Otub1Q7TQI3 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Otub1Q7TQI3 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC13.68□□□□□ -0.22
Otub1Q7TQI3 Trav13-3-201ENSMUST00000117226 336 ntBASIC13.68□□□□□ -0.22
Otub1Q7TQI3 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC13.68□□□□□ -0.22
Otub1Q7TQI3 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Otub1Q7TQI3 Gm18206-201ENSMUST00000207027 926 ntBASIC13.68□□□□□ -0.22
Otub1Q7TQI3 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC13.68□□□□□ -0.22
Otub1Q7TQI3 Gm45747-201ENSMUST00000212203 999 ntBASIC13.68□□□□□ -0.22
Otub1Q7TQI3 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC13.68□□□□□ -0.22
Otub1Q7TQI3 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Otub1Q7TQI3 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC13.68□□□□□ -0.22
Otub1Q7TQI3 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC13.68□□□□□ -0.22
Otub1Q7TQI3 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Otub1Q7TQI3 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Otub1Q7TQI3 Grm5-204ENSMUST00000155358 4500 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Otub1Q7TQI3 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Otub1Q7TQI3 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Otub1Q7TQI3 Pcdhb18-201ENSMUST00000055949 5041 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Otub1Q7TQI3 Nynrin-202ENSMUST00000168479 7511 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Otub1Q7TQI3 Gm44291-201ENSMUST00000203102 2865 ntBASIC13.68□□□□□ -0.22
Otub1Q7TQI3 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Otub1Q7TQI3 Rev3l-201ENSMUST00000019986 10713 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Otub1Q7TQI3 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Otub1Q7TQI3 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Otub1Q7TQI3 Nkain3-202ENSMUST00000119374 4567 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Otub1Q7TQI3 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Otub1Q7TQI3 Ints14-201ENSMUST00000037504 2837 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Otub1Q7TQI3 Atp2b3-201ENSMUST00000033744 3894 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Otub1Q7TQI3 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Otub1Q7TQI3 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Otub1Q7TQI3 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Otub1Q7TQI3 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Otub1Q7TQI3 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Otub1Q7TQI3 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Otub1Q7TQI3 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Otub1Q7TQI3 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Otub1Q7TQI3 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Otub1Q7TQI3 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC13.67□□□□□ -0.22
Otub1Q7TQI3 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC13.67□□□□□ -0.22
Otub1Q7TQI3 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC13.67□□□□□ -0.22
Otub1Q7TQI3 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC13.67□□□□□ -0.22
Otub1Q7TQI3 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Otub1Q7TQI3 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC13.67□□□□□ -0.22
Otub1Q7TQI3 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
Otub1Q7TQI3 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Otub1Q7TQI3 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Otub1Q7TQI3 Adamts7-208ENSMUST00000167122 5338 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Otub1Q7TQI3 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Otub1Q7TQI3 Csgalnact2-201ENSMUST00000049344 3661 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Otub1Q7TQI3 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC13.67□□□□□ -0.22
Otub1Q7TQI3 Tbrg4-201ENSMUST00000000394 2290 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Otub1Q7TQI3 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Otub1Q7TQI3 Cadps2-209ENSMUST00000142913 4533 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Otub1Q7TQI3 4932422M17Rik-201ENSMUST00000195992 2639 ntBASIC13.67□□□□□ -0.22
Otub1Q7TQI3 Ehbp1l1-201ENSMUST00000049295 6404 ntAPPRIS P4 TSL 1 (best) BASIC13.67□□□□□ -0.22
Otub1Q7TQI3 Repin1-204ENSMUST00000135151 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Otub1Q7TQI3 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Otub1Q7TQI3 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Otub1Q7TQI3 Luc7l3-209ENSMUST00000166312 5244 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Otub1Q7TQI3 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Otub1Q7TQI3 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Otub1Q7TQI3 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
Otub1Q7TQI3 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Otub1Q7TQI3 Mmp14-206ENSMUST00000225641 3238 ntBASIC13.66□□□□□ -0.22
Otub1Q7TQI3 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Otub1Q7TQI3 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Otub1Q7TQI3 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Otub1Q7TQI3 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Otub1Q7TQI3 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Otub1Q7TQI3 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC13.66□□□□□ -0.22
Otub1Q7TQI3 Bptf-203ENSMUST00000106763 12036 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Otub1Q7TQI3 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC13.66□□□□□ -0.22
Otub1Q7TQI3 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Otub1Q7TQI3 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC13.66□□□□□ -0.22
Otub1Q7TQI3 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Otub1Q7TQI3 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC13.66□□□□□ -0.22
Otub1Q7TQI3 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Otub1Q7TQI3 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC13.66□□□□□ -0.22
Otub1Q7TQI3 Gm27301-201ENSMUST00000184012 127 ntBASIC13.66□□□□□ -0.22
Otub1Q7TQI3 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC13.66□□□□□ -0.22
Otub1Q7TQI3 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Otub1Q7TQI3 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC13.66□□□□□ -0.22
Otub1Q7TQI3 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Otub1Q7TQI3 Fam174a-202ENSMUST00000186780 3460 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Otub1Q7TQI3 Ankrd6-202ENSMUST00000084748 4354 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Otub1Q7TQI3 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Otub1Q7TQI3 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Otub1Q7TQI3 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Otub1Q7TQI3 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 31.8 ms