Protein–RNA interactions for Protein: Q60611

Satb1, DNA-binding protein SATB1, mousemouse

Predictions only

Length 764 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Satb1Q60611 Gm15420-201ENSMUST00000133274 382 ntTSL 3 BASIC14.89□□□□□ -0.03
Satb1Q60611 Pigyl-202ENSMUST00000148088 676 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
Satb1Q60611 Gm10499-201ENSMUST00000174094 934 ntBASIC14.89□□□□□ -0.03
Satb1Q60611 Gm8318-201ENSMUST00000182954 872 ntBASIC14.89□□□□□ -0.03
Satb1Q60611 Gm27892-201ENSMUST00000185017 106 ntBASIC14.89□□□□□ -0.03
Satb1Q60611 2310016G11Rik-202ENSMUST00000209111 733 ntTSL 3 BASIC14.89□□□□□ -0.03
Satb1Q60611 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Satb1Q60611 Rnf151-201ENSMUST00000008626 1189 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Satb1Q60611 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Satb1Q60611 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Satb1Q60611 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC14.89□□□□□ -0.03
Satb1Q60611 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Satb1Q60611 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Satb1Q60611 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Satb1Q60611 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC14.89□□□□□ -0.03
Satb1Q60611 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Satb1Q60611 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
Satb1Q60611 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC14.89□□□□□ -0.03
Satb1Q60611 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Satb1Q60611 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
Satb1Q60611 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
Satb1Q60611 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Satb1Q60611 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Satb1Q60611 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Satb1Q60611 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Satb1Q60611 AC131068.2-201ENSMUST00000226175 1453 ntBASIC14.89□□□□□ -0.03
Satb1Q60611 Sirt3-201ENSMUST00000026559 1461 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Satb1Q60611 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Satb1Q60611 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Satb1Q60611 Heatr3-201ENSMUST00000034079 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Satb1Q60611 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Satb1Q60611 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Satb1Q60611 Ints1-201ENSMUST00000072607 7102 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
Satb1Q60611 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Satb1Q60611 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC14.88□□□□□ -0.03
Satb1Q60611 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Satb1Q60611 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
Satb1Q60611 Gm24543-201ENSMUST00000103867 82 ntBASIC14.88□□□□□ -0.03
Satb1Q60611 Orai3-202ENSMUST00000118865 768 ntTSL 3 BASIC14.88□□□□□ -0.03
Satb1Q60611 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC14.88□□□□□ -0.03
Satb1Q60611 Gm42420-201ENSMUST00000126621 634 ntAPPRIS P1 TSL 3 BASIC14.88□□□□□ -0.03
Satb1Q60611 Sf3a2-204ENSMUST00000151928 781 ntTSL 5 BASIC14.88□□□□□ -0.03
Satb1Q60611 Mir3102-201ENSMUST00000175555 104 ntBASIC14.88□□□□□ -0.03
Satb1Q60611 Apoa5-203ENSMUST00000213878 727 ntTSL 3 BASIC14.88□□□□□ -0.03
Satb1Q60611 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
Satb1Q60611 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Satb1Q60611 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC14.88□□□□□ -0.03
Satb1Q60611 Slc27a1-201ENSMUST00000034267 2795 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Satb1Q60611 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Satb1Q60611 Ninj1-202ENSMUST00000120733 1321 ntTSL 5 BASIC14.88□□□□□ -0.03
Satb1Q60611 Zbtb46-201ENSMUST00000029106 5309 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
Satb1Q60611 Sptb-201ENSMUST00000021458 10394 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Satb1Q60611 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Satb1Q60611 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Satb1Q60611 Igf2os-203ENSMUST00000141681 4778 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Satb1Q60611 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Satb1Q60611 Nap1l1-208ENSMUST00000219961 1512 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Satb1Q60611 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
Satb1Q60611 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Satb1Q60611 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Satb1Q60611 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Satb1Q60611 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Satb1Q60611 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Satb1Q60611 Coro6-205ENSMUST00000108391 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Satb1Q60611 Gtf2h4-207ENSMUST00000160734 1569 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Satb1Q60611 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Satb1Q60611 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Satb1Q60611 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Satb1Q60611 Gm12957-201ENSMUST00000117835 377 ntBASIC14.87□□□□□ -0.03
Satb1Q60611 Gm4875-201ENSMUST00000118257 786 ntBASIC14.87□□□□□ -0.03
Satb1Q60611 Nfu1-203ENSMUST00000120240 1195 ntAPPRIS P3 TSL 5 BASIC14.87□□□□□ -0.03
Satb1Q60611 Klk12-201ENSMUST00000014063 924 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Satb1Q60611 Mir1982-201ENSMUST00000157368 74 ntBASIC14.87□□□□□ -0.03
Satb1Q60611 Ighv8-7-201ENSMUST00000194349 297 ntBASIC14.87□□□□□ -0.03
Satb1Q60611 Uqcr10-201ENSMUST00000058407 434 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Satb1Q60611 Pabpn1l-201ENSMUST00000093059 1148 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Satb1Q60611 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
Satb1Q60611 Fam151a-201ENSMUST00000047620 1923 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Satb1Q60611 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Satb1Q60611 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
Satb1Q60611 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC14.87□□□□□ -0.03
Satb1Q60611 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Satb1Q60611 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Satb1Q60611 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Satb1Q60611 Nrxn1-207ENSMUST00000160844 9309 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Satb1Q60611 Pag1-204ENSMUST00000161949 8256 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Satb1Q60611 Ascc3-201ENSMUST00000035606 7760 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
Satb1Q60611 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Satb1Q60611 Tdrd12-205ENSMUST00000205407 1412 ntTSL 5 BASIC14.86□□□□□ -0.03
Satb1Q60611 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Satb1Q60611 Dsp-202ENSMUST00000127906 7761 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
Satb1Q60611 Rpsa-ps9-201ENSMUST00000120702 885 ntBASIC14.86□□□□□ -0.03
Satb1Q60611 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Satb1Q60611 Gm9002-201ENSMUST00000178437 499 ntBASIC14.86□□□□□ -0.03
Satb1Q60611 Il13-201ENSMUST00000020650 1205 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Satb1Q60611 Rpl18-208ENSMUST00000211061 552 ntTSL 5 BASIC14.86□□□□□ -0.03
Satb1Q60611 AC124510.1-201ENSMUST00000222659 583 ntTSL 5 BASIC14.86□□□□□ -0.03
Satb1Q60611 Shd-206ENSMUST00000225145 998 ntBASIC14.86□□□□□ -0.03
Satb1Q60611 Casp7-201ENSMUST00000026062 2350 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Satb1Q60611 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 50.5 ms