Protein–RNA interactions for Protein: Q5NCC3

Trim41, E3 ubiquitin-protein ligase TRIM41, mousemouse

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim41Q5NCC3 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
Trim41Q5NCC3 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC24.82■■□□□ 1.56
Trim41Q5NCC3 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
Trim41Q5NCC3 D130052B06Rik-201ENSMUST00000101371 2295 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
Trim41Q5NCC3 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
Trim41Q5NCC3 Gm20499-201ENSMUST00000140374 444 ntAPPRIS P1 TSL 2 BASIC24.82■■□□□ 1.56
Trim41Q5NCC3 Anapc16-202ENSMUST00000182116 581 ntTSL 3 BASIC24.82■■□□□ 1.56
Trim41Q5NCC3 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
Trim41Q5NCC3 AC164612.1-201ENSMUST00000216699 517 ntTSL 5 BASIC24.82■■□□□ 1.56
Trim41Q5NCC3 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
Trim41Q5NCC3 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
Trim41Q5NCC3 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
Trim41Q5NCC3 Gm26882-201ENSMUST00000181611 1537 ntTSL 5 BASIC24.81■■□□□ 1.56
Trim41Q5NCC3 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC24.81■■□□□ 1.56
Trim41Q5NCC3 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC24.81■■□□□ 1.56
Trim41Q5NCC3 Hsf4-206ENSMUST00000173859 1576 ntTSL 1 (best) BASIC24.81■■□□□ 1.56
Trim41Q5NCC3 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC24.81■■□□□ 1.56
Trim41Q5NCC3 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
Trim41Q5NCC3 Ice2-203ENSMUST00000117610 800 ntTSL 1 (best) BASIC24.81■■□□□ 1.56
Trim41Q5NCC3 2210408F21Rik-214ENSMUST00000155345 1022 ntTSL 1 (best) BASIC24.81■■□□□ 1.56
Trim41Q5NCC3 Gm42846-201ENSMUST00000201771 514 ntTSL 3 BASIC24.81■■□□□ 1.56
Trim41Q5NCC3 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
Trim41Q5NCC3 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
Trim41Q5NCC3 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
Trim41Q5NCC3 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC24.81■■□□□ 1.56
Trim41Q5NCC3 Asic3-201ENSMUST00000049346 1853 ntTSL 1 (best) BASIC24.81■■□□□ 1.56
Trim41Q5NCC3 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC24.81■■□□□ 1.56
Trim41Q5NCC3 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC24.8■■□□□ 1.56
Trim41Q5NCC3 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC24.8■■□□□ 1.56
Trim41Q5NCC3 Cyp20a1-201ENSMUST00000060608 2223 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
Trim41Q5NCC3 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC24.8■■□□□ 1.56
Trim41Q5NCC3 Mrps10-202ENSMUST00000119841 1113 ntTSL 1 (best) BASIC24.8■■□□□ 1.56
Trim41Q5NCC3 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC24.8■■□□□ 1.56
Trim41Q5NCC3 1600014C23Rik-201ENSMUST00000178179 518 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
Trim41Q5NCC3 D8Ertd738e-201ENSMUST00000019506 616 ntAPPRIS P1 TSL 2 BASIC24.8■■□□□ 1.56
Trim41Q5NCC3 Svip-203ENSMUST00000209193 487 ntTSL 1 (best) BASIC24.8■■□□□ 1.56
Trim41Q5NCC3 AC158987.1-201ENSMUST00000214586 961 ntTSL 5 BASIC24.8■■□□□ 1.56
Trim41Q5NCC3 Gm11149-201ENSMUST00000068730 1250 ntTSL 1 (best) BASIC24.8■■□□□ 1.56
Trim41Q5NCC3 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC24.8■■□□□ 1.56
Trim41Q5NCC3 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
Trim41Q5NCC3 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC24.8■■□□□ 1.56
Trim41Q5NCC3 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC24.8■■□□□ 1.56
Trim41Q5NCC3 Pdlim2-210ENSMUST00000153735 1578 ntAPPRIS P1 TSL 5 BASIC24.8■■□□□ 1.56
Trim41Q5NCC3 Fggy-203ENSMUST00000107091 1395 ntTSL 5 BASIC24.8■■□□□ 1.56
Trim41Q5NCC3 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
Trim41Q5NCC3 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC24.79■■□□□ 1.56
Trim41Q5NCC3 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
Trim41Q5NCC3 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
Trim41Q5NCC3 Gfpt1-203ENSMUST00000113657 1200 ntTSL 1 (best) BASIC24.79■■□□□ 1.56
Trim41Q5NCC3 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC24.79■■□□□ 1.56
Trim41Q5NCC3 Hspb9-201ENSMUST00000017976 652 ntAPPRIS ALT2 BASIC24.79■■□□□ 1.56
Trim41Q5NCC3 Gm26600-201ENSMUST00000181637 1256 ntTSL 1 (best) BASIC24.79■■□□□ 1.56
Trim41Q5NCC3 Spag7-201ENSMUST00000018431 1159 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
Trim41Q5NCC3 Gm28911-201ENSMUST00000188837 117 ntBASIC24.79■■□□□ 1.56
Trim41Q5NCC3 2810429I04Rik-210ENSMUST00000189464 868 ntTSL 1 (best) BASIC24.79■■□□□ 1.56
Trim41Q5NCC3 2900092O11Rik-201ENSMUST00000191770 755 ntBASIC24.79■■□□□ 1.56
Trim41Q5NCC3 4921530L21Rik-201ENSMUST00000045892 1161 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
Trim41Q5NCC3 Smim11-201ENSMUST00000063641 517 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
Trim41Q5NCC3 Acadm-201ENSMUST00000072697 2047 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
Trim41Q5NCC3 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
Trim41Q5NCC3 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC24.79■■□□□ 1.56
Trim41Q5NCC3 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC24.79■■□□□ 1.56
Trim41Q5NCC3 Gm13034-201ENSMUST00000121342 3177 ntBASIC24.79■■□□□ 1.56
Trim41Q5NCC3 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC24.79■■□□□ 1.56
Trim41Q5NCC3 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
Trim41Q5NCC3 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC24.78■■□□□ 1.56
Trim41Q5NCC3 Arid5a-201ENSMUST00000097778 2270 ntAPPRIS ALT2 TSL 1 (best) BASIC24.78■■□□□ 1.56
Trim41Q5NCC3 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC24.78■■□□□ 1.56
Trim41Q5NCC3 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
Trim41Q5NCC3 Ift20-203ENSMUST00000128788 1141 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
Trim41Q5NCC3 3000002C10Rik-202ENSMUST00000133495 1008 ntBASIC24.78■■□□□ 1.56
Trim41Q5NCC3 Dnase2a-206ENSMUST00000145292 678 ntTSL 5 BASIC24.78■■□□□ 1.56
Trim41Q5NCC3 Gm17409-201ENSMUST00000167423 962 ntAPPRIS P1 BASIC24.78■■□□□ 1.56
Trim41Q5NCC3 Trib2-204ENSMUST00000221518 1192 ntTSL 5 BASIC24.78■■□□□ 1.56
Trim41Q5NCC3 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
Trim41Q5NCC3 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC24.78■■□□□ 1.56
Trim41Q5NCC3 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC24.78■■□□□ 1.56
Trim41Q5NCC3 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC24.78■■□□□ 1.56
Trim41Q5NCC3 Alox8-202ENSMUST00000094078 1947 ntAPPRIS ALT2 TSL 5 BASIC24.78■■□□□ 1.56
Trim41Q5NCC3 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC24.78■■□□□ 1.56
Trim41Q5NCC3 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC24.78■■□□□ 1.56
Trim41Q5NCC3 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC24.78■■□□□ 1.56
Trim41Q5NCC3 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC24.78■■□□□ 1.56
Trim41Q5NCC3 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
Trim41Q5NCC3 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC24.78■■□□□ 1.56
Trim41Q5NCC3 AC174678.1-201ENSMUST00000228007 2749 ntBASIC24.77■■□□□ 1.56
Trim41Q5NCC3 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
Trim41Q5NCC3 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC24.77■■□□□ 1.56
Trim41Q5NCC3 Hus1b-201ENSMUST00000102943 1187 ntAPPRIS P1 BASIC24.77■■□□□ 1.56
Trim41Q5NCC3 Gm14660-201ENSMUST00000119809 575 ntBASIC24.77■■□□□ 1.56
Trim41Q5NCC3 Pax5-213ENSMUST00000173821 996 ntTSL 5 BASIC24.77■■□□□ 1.56
Trim41Q5NCC3 Gm28198-201ENSMUST00000190938 471 ntTSL 3 BASIC24.77■■□□□ 1.56
Trim41Q5NCC3 AC093022.1-201ENSMUST00000226949 1072 ntBASIC24.77■■□□□ 1.56
Trim41Q5NCC3 Batf3-201ENSMUST00000027943 801 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
Trim41Q5NCC3 Gm5356-201ENSMUST00000093326 615 ntBASIC24.77■■□□□ 1.56
Trim41Q5NCC3 Polr2g-201ENSMUST00000096261 868 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
Trim41Q5NCC3 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC24.77■■□□□ 1.56
Trim41Q5NCC3 Gm21983-201ENSMUST00000154724 1690 ntAPPRIS P1 TSL 2 BASIC24.77■■□□□ 1.56
Trim41Q5NCC3 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC24.77■■□□□ 1.56
Trim41Q5NCC3 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC24.77■■□□□ 1.56
Retrieved 100 of 76,532 protein–RNA pairs in 76.6 ms