Protein–RNA interactions for Protein: Q3UHA3

Spg11, Spatacsin, mousemouse

Predictions only

Length 2,430 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Spg11Q3UHA3 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Spg11Q3UHA3 B3gnt8-201ENSMUST00000076034 1463 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Spg11Q3UHA3 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Spg11Q3UHA3 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Spg11Q3UHA3 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Spg11Q3UHA3 Gm9431-201ENSMUST00000119765 1051 ntBASIC13.1□□□□□ -0.31
Spg11Q3UHA3 Olfr647-ps1-201ENSMUST00000121599 960 ntBASIC13.1□□□□□ -0.31
Spg11Q3UHA3 Gm12786-201ENSMUST00000129617 644 ntTSL 3 BASIC13.1□□□□□ -0.31
Spg11Q3UHA3 1700003G13Rik-202ENSMUST00000131342 705 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Spg11Q3UHA3 Gm2511-202ENSMUST00000206158 455 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Spg11Q3UHA3 Gm45118-201ENSMUST00000208928 825 ntBASIC13.1□□□□□ -0.31
Spg11Q3UHA3 Gpx3-201ENSMUST00000082430 1594 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Spg11Q3UHA3 Mettl2-201ENSMUST00000021030 1867 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Spg11Q3UHA3 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Spg11Q3UHA3 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Spg11Q3UHA3 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Spg11Q3UHA3 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC13.1□□□□□ -0.31
Spg11Q3UHA3 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Spg11Q3UHA3 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Spg11Q3UHA3 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Spg11Q3UHA3 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Spg11Q3UHA3 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Spg11Q3UHA3 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Spg11Q3UHA3 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Spg11Q3UHA3 Ppt2-201ENSMUST00000064953 1729 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Spg11Q3UHA3 Pqbp1-203ENSMUST00000115655 1148 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Spg11Q3UHA3 Gm11751-201ENSMUST00000126187 460 ntTSL 3 BASIC13.09□□□□□ -0.31
Spg11Q3UHA3 Gm13010-201ENSMUST00000140495 828 ntTSL 5 BASIC13.09□□□□□ -0.31
Spg11Q3UHA3 Gm9540-201ENSMUST00000188230 478 ntBASIC13.09□□□□□ -0.31
Spg11Q3UHA3 Tyms-ps-201ENSMUST00000219550 915 ntBASIC13.09□□□□□ -0.31
Spg11Q3UHA3 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Spg11Q3UHA3 Dolpp1-202ENSMUST00000113612 1958 ntTSL 3 BASIC13.09□□□□□ -0.31
Spg11Q3UHA3 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Spg11Q3UHA3 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Spg11Q3UHA3 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Spg11Q3UHA3 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Spg11Q3UHA3 Etfrf1-207ENSMUST00000111726 1374 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Spg11Q3UHA3 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Spg11Q3UHA3 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Spg11Q3UHA3 Celf4-206ENSMUST00000224553 1729 ntBASIC13.09□□□□□ -0.31
Spg11Q3UHA3 AC123857.2-201ENSMUST00000225756 1582 ntBASIC13.09□□□□□ -0.31
Spg11Q3UHA3 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Spg11Q3UHA3 Gm11964-201ENSMUST00000120982 444 ntBASIC13.09□□□□□ -0.31
Spg11Q3UHA3 1700081H04Rik-201ENSMUST00000190550 1128 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Spg11Q3UHA3 Gm30459-201ENSMUST00000206203 1193 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Spg11Q3UHA3 Saa2-202ENSMUST00000210272 511 ntTSL 3 BASIC13.09□□□□□ -0.31
Spg11Q3UHA3 AC139319.1-201ENSMUST00000223331 690 ntTSL 5 BASIC13.09□□□□□ -0.31
Spg11Q3UHA3 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC13.09□□□□□ -0.31
Spg11Q3UHA3 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Spg11Q3UHA3 Gm12280-201ENSMUST00000155836 1624 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Spg11Q3UHA3 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Spg11Q3UHA3 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Spg11Q3UHA3 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Spg11Q3UHA3 Gm26747-201ENSMUST00000180597 1716 ntTSL 5 BASIC13.08□□□□□ -0.31
Spg11Q3UHA3 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.31
Spg11Q3UHA3 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Spg11Q3UHA3 AC153526.5-201ENSMUST00000218661 2147 ntBASIC13.08□□□□□ -0.32
Spg11Q3UHA3 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
Spg11Q3UHA3 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Spg11Q3UHA3 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Spg11Q3UHA3 Gm12485-201ENSMUST00000119641 291 ntBASIC13.08□□□□□ -0.32
Spg11Q3UHA3 Gm14277-201ENSMUST00000121195 360 ntBASIC13.08□□□□□ -0.32
Spg11Q3UHA3 Mcpt8-201ENSMUST00000015594 836 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Spg11Q3UHA3 Pagr1b-201ENSMUST00000172958 693 ntAPPRIS P1 TSL 3 BASIC13.08□□□□□ -0.32
Spg11Q3UHA3 AC166997.1-201ENSMUST00000225122 572 ntBASIC13.08□□□□□ -0.32
Spg11Q3UHA3 Omt2b-201ENSMUST00000043734 735 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.32
Spg11Q3UHA3 Aym1-201ENSMUST00000066573 528 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
Spg11Q3UHA3 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
Spg11Q3UHA3 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Spg11Q3UHA3 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Spg11Q3UHA3 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Spg11Q3UHA3 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Spg11Q3UHA3 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
Spg11Q3UHA3 Tomm5-204ENSMUST00000107810 639 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Spg11Q3UHA3 Gng12-205ENSMUST00000114226 1155 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Spg11Q3UHA3 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Spg11Q3UHA3 Gm11831-201ENSMUST00000141538 629 ntTSL 3 BASIC13.08□□□□□ -0.32
Spg11Q3UHA3 Gm25261-201ENSMUST00000157416 134 ntBASIC13.08□□□□□ -0.32
Spg11Q3UHA3 Gnb2-215ENSMUST00000170293 993 ntTSL 5 BASIC13.08□□□□□ -0.32
Spg11Q3UHA3 Cryab-201ENSMUST00000034562 946 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Spg11Q3UHA3 Ctrc-201ENSMUST00000037059 951 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Spg11Q3UHA3 Gm3756-201ENSMUST00000169182 1355 ntBASIC13.08□□□□□ -0.32
Spg11Q3UHA3 Gcnt2-205ENSMUST00000225759 1366 ntAPPRIS ALT2 BASIC13.08□□□□□ -0.32
Spg11Q3UHA3 2310022A10Rik-204ENSMUST00000187032 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Spg11Q3UHA3 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Spg11Q3UHA3 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC13.07□□□□□ -0.32
Spg11Q3UHA3 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
Spg11Q3UHA3 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Spg11Q3UHA3 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Spg11Q3UHA3 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Spg11Q3UHA3 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Spg11Q3UHA3 Tomt-202ENSMUST00000106970 1354 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Spg11Q3UHA3 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Spg11Q3UHA3 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC13.07□□□□□ -0.32
Spg11Q3UHA3 Gm16099-202ENSMUST00000151873 660 ntTSL 5 BASIC13.07□□□□□ -0.32
Spg11Q3UHA3 Gm17409-201ENSMUST00000167423 962 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
Spg11Q3UHA3 Gm16740-201ENSMUST00000181819 956 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Spg11Q3UHA3 Gm43378-201ENSMUST00000199336 582 ntBASIC13.07□□□□□ -0.32
Spg11Q3UHA3 1700112L15Rik-201ENSMUST00000212067 510 ntBASIC13.07□□□□□ -0.32
Spg11Q3UHA3 Gm45770-201ENSMUST00000212105 616 ntBASIC13.07□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 39.6 ms