Protein–RNA interactions for Protein: P62812

Gabra1, Gamma-aminobutyric acid receptor subunit alpha-1, mousemouse

Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gabra1P62812 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC12.11□□□□□ -0.47
Gabra1P62812 Snx22-201ENSMUST00000044711 2543 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Gabra1P62812 Engase-202ENSMUST00000135383 4064 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Gabra1P62812 Clcf1-201ENSMUST00000046506 1847 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Gabra1P62812 Tmem200a-201ENSMUST00000066049 4115 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Gabra1P62812 Zfp385c-201ENSMUST00000103119 2766 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Gabra1P62812 Zmym4-201ENSMUST00000106108 7102 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Gabra1P62812 Pfkfb3-205ENSMUST00000114845 1971 ntTSL 5 BASIC12.1□□□□□ -0.47
Gabra1P62812 Pisd-202ENSMUST00000071829 1986 ntTSL 5 BASIC12.1□□□□□ -0.47
Gabra1P62812 Tmem163-205ENSMUST00000185560 3488 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Gabra1P62812 Iah1-204ENSMUST00000223345 1890 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Gabra1P62812 Gm38355-201ENSMUST00000192514 1570 ntBASIC12.1□□□□□ -0.47
Gabra1P62812 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Gabra1P62812 Il6ra-201ENSMUST00000029559 3343 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Gabra1P62812 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Gabra1P62812 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Gabra1P62812 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Gabra1P62812 Vapb-201ENSMUST00000067530 7029 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Gabra1P62812 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC12.1□□□□□ -0.47
Gabra1P62812 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Gabra1P62812 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Gabra1P62812 Saa1-201ENSMUST00000128088 609 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Gabra1P62812 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Gabra1P62812 Lhx1-201ENSMUST00000018842 3846 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Gabra1P62812 Gm29518-201ENSMUST00000190858 372 ntBASIC12.1□□□□□ -0.47
Gabra1P62812 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC12.1□□□□□ -0.47
Gabra1P62812 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Gabra1P62812 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Gabra1P62812 Xndc1-201ENSMUST00000094130 2298 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Gabra1P62812 Radil-204ENSMUST00000110785 3708 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Gabra1P62812 Sec62-201ENSMUST00000029256 3967 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Gabra1P62812 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC12.1□□□□□ -0.47
Gabra1P62812 Map6-201ENSMUST00000068973 3430 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Gabra1P62812 Sbk1-201ENSMUST00000056028 4109 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Gabra1P62812 Szrd1-203ENSMUST00000102487 3244 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Gabra1P62812 Gga3-202ENSMUST00000106508 3582 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Gabra1P62812 Zbtb39-201ENSMUST00000054287 5960 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Gabra1P62812 Mest-202ENSMUST00000124665 2665 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Gabra1P62812 Pcyox1-201ENSMUST00000032065 4295 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Gabra1P62812 Ssh1-204ENSMUST00000159592 8436 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Gabra1P62812 Col9a3-201ENSMUST00000103059 2846 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Gabra1P62812 Kctd11-201ENSMUST00000050555 3146 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
Gabra1P62812 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Gabra1P62812 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Gabra1P62812 Pgghg-204ENSMUST00000164580 3001 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Gabra1P62812 Tigd2-201ENSMUST00000062626 3007 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Gabra1P62812 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Gabra1P62812 Gdf6-201ENSMUST00000057613 3532 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Gabra1P62812 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Gabra1P62812 Men1-207ENSMUST00000113503 1851 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Gabra1P62812 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Gabra1P62812 Chd1-202ENSMUST00000024627 7916 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Gabra1P62812 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Gabra1P62812 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC12.09□□□□□ -0.47
Gabra1P62812 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC12.09□□□□□ -0.47
Gabra1P62812 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC12.09□□□□□ -0.47
Gabra1P62812 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Gabra1P62812 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Gabra1P62812 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC12.09□□□□□ -0.47
Gabra1P62812 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Gabra1P62812 Gm25016-201ENSMUST00000158399 131 ntBASIC12.09□□□□□ -0.47
Gabra1P62812 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC12.09□□□□□ -0.47
Gabra1P62812 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Gabra1P62812 Gm44414-201ENSMUST00000203660 2109 ntBASIC12.09□□□□□ -0.47
Gabra1P62812 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Gabra1P62812 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Gabra1P62812 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Gabra1P62812 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Gabra1P62812 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Gabra1P62812 Usp20-202ENSMUST00000102849 5088 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Gabra1P62812 Tbr1-201ENSMUST00000048934 3977 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Gabra1P62812 Arid4b-202ENSMUST00000110533 3020 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Gabra1P62812 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Gabra1P62812 Gm44241-201ENSMUST00000203230 1662 ntBASIC12.09□□□□□ -0.47
Gabra1P62812 Csk-209ENSMUST00000217314 2162 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Gabra1P62812 Galnt17-201ENSMUST00000086023 8040 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Gabra1P62812 Rasal3-201ENSMUST00000063824 3681 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Gabra1P62812 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Gabra1P62812 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Gabra1P62812 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Gabra1P62812 F2r-201ENSMUST00000059193 3336 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Gabra1P62812 Atp2a3-203ENSMUST00000108485 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Gabra1P62812 Atp2a3-204ENSMUST00000108486 4540 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Gabra1P62812 Rnf10-201ENSMUST00000040555 3106 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Gabra1P62812 Aida-201ENSMUST00000109166 4279 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
Gabra1P62812 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC12.08□□□□□ -0.47
Gabra1P62812 Aifm3-202ENSMUST00000115685 2357 ntAPPRIS ALT1 TSL 1 (best) BASIC12.08□□□□□ -0.47
Gabra1P62812 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC12.08□□□□□ -0.47
Gabra1P62812 Chrna10-201ENSMUST00000084830 2513 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Gabra1P62812 Zyx-202ENSMUST00000164375 3188 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Gabra1P62812 Ldlrad3-201ENSMUST00000058790 3833 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Gabra1P62812 Ywhag-205ENSMUST00000198270 1610 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Gabra1P62812 Umad1-208ENSMUST00000162034 2015 ntAPPRIS ALT2 TSL 3 BASIC12.08□□□□□ -0.48
Gabra1P62812 Mmp14-206ENSMUST00000225641 3238 ntBASIC12.08□□□□□ -0.48
Gabra1P62812 Pnkp-201ENSMUST00000003044 2184 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Gabra1P62812 Aspg-201ENSMUST00000079400 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Gabra1P62812 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC12.08□□□□□ -0.48
Gabra1P62812 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Gabra1P62812 Gm11453-201ENSMUST00000117318 1007 ntBASIC12.08□□□□□ -0.48
Gabra1P62812 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC12.08□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 37.2 ms