Protein–RNA interactions for Protein: P61025

Cks1b, Cyclin-dependent kinases regulatory subunit 1, mousemouse

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cks1bP61025 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC10.28□□□□□ -0.76
Cks1bP61025 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Cks1bP61025 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Cks1bP61025 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC10.28□□□□□ -0.76
Cks1bP61025 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Cks1bP61025 Krtap5-1-202ENSMUST00000188274 742 ntBASIC10.28□□□□□ -0.76
Cks1bP61025 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC10.28□□□□□ -0.76
Cks1bP61025 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC10.28□□□□□ -0.76
Cks1bP61025 Gm45328-201ENSMUST00000210942 917 ntBASIC10.28□□□□□ -0.76
Cks1bP61025 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC10.28□□□□□ -0.76
Cks1bP61025 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC10.28□□□□□ -0.76
Cks1bP61025 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Cks1bP61025 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Cks1bP61025 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Cks1bP61025 Ackr2-201ENSMUST00000050327 2853 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Cks1bP61025 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Cks1bP61025 Zfp354a-202ENSMUST00000102766 2592 ntAPPRIS P3 TSL 1 (best) BASIC10.28□□□□□ -0.76
Cks1bP61025 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC10.28□□□□□ -0.76
Cks1bP61025 Myo18a-221ENSMUST00000167856 6132 ntTSL 5 BASIC10.28□□□□□ -0.76
Cks1bP61025 Gm37644-201ENSMUST00000192190 2270 ntBASIC10.28□□□□□ -0.76
Cks1bP61025 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Cks1bP61025 Lpar1-205ENSMUST00000107575 3421 ntAPPRIS P3 TSL 1 (best) BASIC10.28□□□□□ -0.76
Cks1bP61025 Gimap3-202ENSMUST00000204036 2145 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Cks1bP61025 Igfals-201ENSMUST00000050714 2111 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Cks1bP61025 Gfra1-203ENSMUST00000129100 4415 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Cks1bP61025 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Cks1bP61025 Fbn1-202ENSMUST00000103234 11971 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Cks1bP61025 Gm38346-201ENSMUST00000192379 2639 ntBASIC10.28□□□□□ -0.76
Cks1bP61025 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Cks1bP61025 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Cks1bP61025 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC10.28□□□□□ -0.76
Cks1bP61025 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Cks1bP61025 Scn5a-202ENSMUST00000117911 8453 ntAPPRIS P3 TSL 1 (best) BASIC10.28□□□□□ -0.76
Cks1bP61025 Ssh3-202ENSMUST00000113852 2735 ntAPPRIS ALT2 TSL 1 (best) BASIC10.27□□□□□ -0.76
Cks1bP61025 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC10.27□□□□□ -0.76
Cks1bP61025 P4ha1-203ENSMUST00000105466 2918 ntAPPRIS ALT1 TSL 1 (best) BASIC10.27□□□□□ -0.76
Cks1bP61025 Edc3-201ENSMUST00000043990 5708 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
Cks1bP61025 Wnt7b-202ENSMUST00000109424 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC10.27□□□□□ -0.76
Cks1bP61025 Rnf10-203ENSMUST00000112097 3476 ntAPPRIS ALT2 TSL 1 (best) BASIC10.27□□□□□ -0.76
Cks1bP61025 Phactr3-205ENSMUST00000108917 4858 ntTSL 1 (best) BASIC10.27□□□□□ -0.76
Cks1bP61025 Eif2a-201ENSMUST00000029387 2299 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
Cks1bP61025 Dysf-210ENSMUST00000153860 6525 ntAPPRIS ALT2 TSL 5 BASIC10.27□□□□□ -0.77
Cks1bP61025 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Cks1bP61025 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Cks1bP61025 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Cks1bP61025 Nhlh2-203ENSMUST00000198675 3943 ntAPPRIS P1 TSL 2 BASIC10.27□□□□□ -0.77
Cks1bP61025 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Cks1bP61025 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Cks1bP61025 Ngef-201ENSMUST00000027477 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC10.27□□□□□ -0.77
Cks1bP61025 Gm14722-201ENSMUST00000118943 689 ntBASIC10.27□□□□□ -0.77
Cks1bP61025 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC10.27□□□□□ -0.77
Cks1bP61025 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC10.27□□□□□ -0.77
Cks1bP61025 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC10.27□□□□□ -0.77
Cks1bP61025 AC112142.1-201ENSMUST00000228796 918 ntBASIC10.27□□□□□ -0.77
Cks1bP61025 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC10.27□□□□□ -0.77
Cks1bP61025 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Cks1bP61025 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Cks1bP61025 Rccd1-201ENSMUST00000047362 3336 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Cks1bP61025 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Cks1bP61025 1110032A03Rik-201ENSMUST00000042468 2082 ntAPPRIS P3 TSL 1 (best) BASIC10.27□□□□□ -0.77
Cks1bP61025 Snx13-201ENSMUST00000048519 6231 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Cks1bP61025 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC10.27□□□□□ -0.77
Cks1bP61025 Slc39a8-201ENSMUST00000029810 3203 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Cks1bP61025 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC10.27□□□□□ -0.77
Cks1bP61025 Gtf2ird1-224ENSMUST00000202280 3052 ntAPPRIS ALT2 TSL 5 BASIC10.27□□□□□ -0.77
Cks1bP61025 Zbtb20-201ENSMUST00000079441 3086 ntAPPRIS P3 TSL 5 BASIC10.27□□□□□ -0.77
Cks1bP61025 Vps4b-201ENSMUST00000094646 4633 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Cks1bP61025 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Cks1bP61025 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC10.27□□□□□ -0.77
Cks1bP61025 Necab1-201ENSMUST00000041606 4922 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Cks1bP61025 4930453N24Rik-201ENSMUST00000076991 5522 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Cks1bP61025 Gm26576-201ENSMUST00000181018 1977 ntTSL 5 BASIC10.26□□□□□ -0.77
Cks1bP61025 Gm43056-201ENSMUST00000197865 2791 ntBASIC10.26□□□□□ -0.77
Cks1bP61025 Sh3bp4-201ENSMUST00000066279 4995 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Cks1bP61025 Yeats2-201ENSMUST00000090052 5997 ntAPPRIS P3 TSL 1 (best) BASIC10.26□□□□□ -0.77
Cks1bP61025 Abcc5-202ENSMUST00000079158 5811 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Cks1bP61025 Col20a1-205ENSMUST00000228434 5012 ntAPPRIS P2 BASIC10.26□□□□□ -0.77
Cks1bP61025 Dnm2-206ENSMUST00000172482 2613 ntAPPRIS P4 TSL 5 BASIC10.26□□□□□ -0.77
Cks1bP61025 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Cks1bP61025 Zbtb7b-203ENSMUST00000107433 3650 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Cks1bP61025 Etnk2-201ENSMUST00000129213 2074 ntAPPRIS ALT2 TSL 2 BASIC10.26□□□□□ -0.77
Cks1bP61025 Sfswap-201ENSMUST00000053737 3313 ntAPPRIS P1 TSL 5 BASIC10.26□□□□□ -0.77
Cks1bP61025 Mid1-215ENSMUST00000171433 2546 ntAPPRIS P1 TSL 5 BASIC10.26□□□□□ -0.77
Cks1bP61025 Cpeb3-204ENSMUST00000126188 4224 ntAPPRIS ALT2 TSL 1 (best) BASIC10.26□□□□□ -0.77
Cks1bP61025 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC10.26□□□□□ -0.77
Cks1bP61025 Ash2l-202ENSMUST00000110608 2134 ntTSL 5 BASIC10.26□□□□□ -0.77
Cks1bP61025 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Cks1bP61025 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Cks1bP61025 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC10.26□□□□□ -0.77
Cks1bP61025 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC10.26□□□□□ -0.77
Cks1bP61025 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC10.26□□□□□ -0.77
Cks1bP61025 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Cks1bP61025 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC10.26□□□□□ -0.77
Cks1bP61025 Gm19164-201ENSMUST00000210667 640 ntBASIC10.26□□□□□ -0.77
Cks1bP61025 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Cks1bP61025 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC10.26□□□□□ -0.77
Cks1bP61025 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Cks1bP61025 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Cks1bP61025 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC10.26□□□□□ -0.77
Cks1bP61025 Ncdn-202ENSMUST00000106116 2434 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Retrieved 100 of 76,532 protein–RNA pairs in 34.2 ms