Protein–RNA interactions for Protein: P58404

Strn4, Striatin-4, mousemouse

Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Strn4P58404 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Strn4P58404 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Strn4P58404 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Strn4P58404 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Strn4P58404 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Strn4P58404 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Strn4P58404 AI606473-201ENSMUST00000177201 1731 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Strn4P58404 Efs-202ENSMUST00000227037 2540 ntBASIC18.04■□□□□ 0.48
Strn4P58404 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC18.04■□□□□ 0.48
Strn4P58404 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Strn4P58404 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
Strn4P58404 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC18.04■□□□□ 0.48
Strn4P58404 Spag7-201ENSMUST00000018431 1159 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Strn4P58404 AC154687.2-201ENSMUST00000223853 640 ntBASIC18.04■□□□□ 0.48
Strn4P58404 Tnfrsf19-205ENSMUST00000225730 744 ntAPPRIS ALT2 BASIC18.04■□□□□ 0.48
Strn4P58404 Tlcd2-201ENSMUST00000043598 1153 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
Strn4P58404 Tmem107-201ENSMUST00000075980 779 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Strn4P58404 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Strn4P58404 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
Strn4P58404 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC18.04■□□□□ 0.48
Strn4P58404 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC18.04■□□□□ 0.48
Strn4P58404 Ap4b1-207ENSMUST00000200377 1823 ntTSL 5 BASIC18.04■□□□□ 0.48
Strn4P58404 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Strn4P58404 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC18.04■□□□□ 0.48
Strn4P58404 Ciart-202ENSMUST00000159739 1939 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Strn4P58404 Gm37736-201ENSMUST00000193564 2802 ntBASIC18.04■□□□□ 0.48
Strn4P58404 Edem3-201ENSMUST00000059498 6327 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Strn4P58404 Ociad1-202ENSMUST00000071081 1311 ntTSL 3 BASIC18.03■□□□□ 0.48
Strn4P58404 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Strn4P58404 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Strn4P58404 Gm45799-201ENSMUST00000106785 367 ntAPPRIS ALT2 TSL 3 BASIC18.03■□□□□ 0.48
Strn4P58404 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Strn4P58404 Gm15945-201ENSMUST00000146755 810 ntTSL 3 BASIC18.03■□□□□ 0.48
Strn4P58404 Gm33320-201ENSMUST00000192232 530 ntBASIC18.03■□□□□ 0.48
Strn4P58404 Ighv8-8-201ENSMUST00000192591 358 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
Strn4P58404 9230110C19Rik-202ENSMUST00000215478 533 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Strn4P58404 AC155286.1-201ENSMUST00000218632 448 ntBASIC18.03■□□□□ 0.48
Strn4P58404 Gm36756-203ENSMUST00000223029 1166 ntTSL 5 BASIC18.03■□□□□ 0.48
Strn4P58404 Nupr1-201ENSMUST00000032961 829 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Strn4P58404 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Strn4P58404 S100a16-201ENSMUST00000098910 1123 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Strn4P58404 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC18.03■□□□□ 0.48
Strn4P58404 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC18.03■□□□□ 0.48
Strn4P58404 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Strn4P58404 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Strn4P58404 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
Strn4P58404 Cyp4x1os-201ENSMUST00000153951 2003 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Strn4P58404 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Strn4P58404 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Strn4P58404 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Strn4P58404 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Strn4P58404 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Strn4P58404 Wac-201ENSMUST00000074919 3070 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Strn4P58404 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Strn4P58404 Gli1-201ENSMUST00000026474 4057 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Strn4P58404 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
Strn4P58404 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Strn4P58404 Tyw1-203ENSMUST00000100662 1867 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Strn4P58404 Plod1-202ENSMUST00000105712 1059 ntTSL 2 BASIC18.02■□□□□ 0.48
Strn4P58404 Gfpt1-203ENSMUST00000113657 1200 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Strn4P58404 Gm13829-201ENSMUST00000119600 138 ntBASIC18.02■□□□□ 0.48
Strn4P58404 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC18.02■□□□□ 0.48
Strn4P58404 Tmem109-207ENSMUST00000147699 1096 ntTSL 2 BASIC18.02■□□□□ 0.48
Strn4P58404 Atpif1-203ENSMUST00000152993 462 ntTSL 2 BASIC18.02■□□□□ 0.48
Strn4P58404 Pax5-213ENSMUST00000173821 996 ntTSL 5 BASIC18.02■□□□□ 0.48
Strn4P58404 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Strn4P58404 Gm44719-201ENSMUST00000206404 149 ntBASIC18.02■□□□□ 0.48
Strn4P58404 Sesn3-207ENSMUST00000209187 1700 ntTSL 5 BASIC18.02■□□□□ 0.48
Strn4P58404 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Strn4P58404 Sh3bgrl3-201ENSMUST00000030651 743 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Strn4P58404 Crybb2-201ENSMUST00000031295 724 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Strn4P58404 Fkbp2-201ENSMUST00000070878 642 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Strn4P58404 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC18.02■□□□□ 0.47
Strn4P58404 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC18.02■□□□□ 0.47
Strn4P58404 Gm5763-201ENSMUST00000155951 1530 ntBASIC18.02■□□□□ 0.47
Strn4P58404 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.47
Strn4P58404 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
Strn4P58404 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
Strn4P58404 Zfp683-201ENSMUST00000105884 1471 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
Strn4P58404 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC18.01■□□□□ 0.47
Strn4P58404 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Strn4P58404 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Strn4P58404 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Strn4P58404 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Strn4P58404 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Strn4P58404 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
Strn4P58404 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Strn4P58404 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
Strn4P58404 Mbd3-202ENSMUST00000105347 914 ntTSL 2 BASIC18.01■□□□□ 0.47
Strn4P58404 Mvk-203ENSMUST00000124260 1051 ntTSL 5 BASIC18.01■□□□□ 0.47
Strn4P58404 Gm37748-201ENSMUST00000194379 1140 ntBASIC18.01■□□□□ 0.47
Strn4P58404 AA619741-201ENSMUST00000195095 646 ntBASIC18.01■□□□□ 0.47
Strn4P58404 Coq7-205ENSMUST00000209146 799 ntTSL 3 BASIC18.01■□□□□ 0.47
Strn4P58404 Polr2h-201ENSMUST00000021405 950 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Strn4P58404 AC121598.1-201ENSMUST00000228224 1019 ntBASIC18.01■□□□□ 0.47
Strn4P58404 Rnf113a1-201ENSMUST00000046433 1223 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
Strn4P58404 Wdr74-201ENSMUST00000049424 1204 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Strn4P58404 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Strn4P58404 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Strn4P58404 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 34.8 ms