Protein–RNA interactions for Protein: P53784

Sox3, Transcription factor SOX-3, mousemouse

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox3P53784 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
Sox3P53784 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Sox3P53784 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Sox3P53784 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Sox3P53784 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Sox3P53784 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Sox3P53784 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Sox3P53784 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
Sox3P53784 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Sox3P53784 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Sox3P53784 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Sox3P53784 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Sox3P53784 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Sox3P53784 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Sox3P53784 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Sox3P53784 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
Sox3P53784 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Sox3P53784 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Sox3P53784 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Sox3P53784 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Sox3P53784 Tap2-201ENSMUST00000025197 3442 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Sox3P53784 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Sox3P53784 Gm14767-201ENSMUST00000121559 586 ntBASIC13.78□□□□□ -0.2
Sox3P53784 A530058N18Rik-202ENSMUST00000134129 411 ntTSL 3 BASIC13.78□□□□□ -0.2
Sox3P53784 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Sox3P53784 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Sox3P53784 Mir6420-201ENSMUST00000185032 102 ntBASIC13.78□□□□□ -0.2
Sox3P53784 AL593843.1-201ENSMUST00000195891 145 ntBASIC13.78□□□□□ -0.2
Sox3P53784 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC13.78□□□□□ -0.2
Sox3P53784 Haus1-201ENSMUST00000048192 1004 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Sox3P53784 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Sox3P53784 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Sox3P53784 Csnk1e-202ENSMUST00000120859 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Sox3P53784 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Sox3P53784 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Sox3P53784 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Sox3P53784 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Sox3P53784 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Sox3P53784 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Sox3P53784 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Sox3P53784 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Sox3P53784 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Sox3P53784 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Sox3P53784 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Sox3P53784 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Sox3P53784 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC13.78□□□□□ -0.2
Sox3P53784 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC13.77□□□□□ -0.2
Sox3P53784 Adamts20-201ENSMUST00000035342 6027 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Sox3P53784 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC13.77□□□□□ -0.2
Sox3P53784 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.2
Sox3P53784 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Sox3P53784 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Sox3P53784 Nmi-202ENSMUST00000112705 1130 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Sox3P53784 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Sox3P53784 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Sox3P53784 Gm12859-201ENSMUST00000117834 427 ntBASIC13.77□□□□□ -0.21
Sox3P53784 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
Sox3P53784 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC13.77□□□□□ -0.21
Sox3P53784 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Sox3P53784 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Sox3P53784 Gm15222-201ENSMUST00000127359 344 ntTSL 3 BASIC13.77□□□□□ -0.21
Sox3P53784 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC13.77□□□□□ -0.21
Sox3P53784 Gm833-201ENSMUST00000143133 884 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Sox3P53784 1700047K16Rik-201ENSMUST00000145068 886 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Sox3P53784 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Sox3P53784 Mrps18c-201ENSMUST00000016977 638 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Sox3P53784 Gm28630-201ENSMUST00000187806 498 ntBASIC13.77□□□□□ -0.21
Sox3P53784 Ndufv3-205ENSMUST00000191598 642 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Sox3P53784 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
Sox3P53784 Gm6007-201ENSMUST00000208170 823 ntBASIC13.77□□□□□ -0.21
Sox3P53784 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Sox3P53784 Gm33785-201ENSMUST00000222961 886 ntTSL 5 BASIC13.77□□□□□ -0.21
Sox3P53784 Riox2-201ENSMUST00000023407 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Sox3P53784 Aif1-201ENSMUST00000025257 847 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
Sox3P53784 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
Sox3P53784 Taf1d-201ENSMUST00000034415 1148 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
Sox3P53784 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Sox3P53784 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Sox3P53784 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Sox3P53784 Ap2s1-201ENSMUST00000086112 836 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Sox3P53784 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC13.77□□□□□ -0.21
Sox3P53784 G0s2-201ENSMUST00000009777 871 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Sox3P53784 Meioc-201ENSMUST00000100378 4573 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
Sox3P53784 Fbxo21-201ENSMUST00000035579 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Sox3P53784 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
Sox3P53784 Zdhhc7-201ENSMUST00000034280 3069 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Sox3P53784 Ano7-201ENSMUST00000058682 2963 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Sox3P53784 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Sox3P53784 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Sox3P53784 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Sox3P53784 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Sox3P53784 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Sox3P53784 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Sox3P53784 Samd14-201ENSMUST00000055947 3318 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Sox3P53784 Lrp11-203ENSMUST00000130590 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Sox3P53784 Gm13337-201ENSMUST00000119183 1594 ntBASIC13.76□□□□□ -0.21
Sox3P53784 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC13.76□□□□□ -0.21
Sox3P53784 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Sox3P53784 Akt2-ps-201ENSMUST00000120718 1449 ntBASIC13.76□□□□□ -0.21
Sox3P53784 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 54.9 ms