Protein–RNA interactions for Protein: P50220

Nkx2-1, Homeobox protein Nkx-2.1, mousemouse

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-1P50220 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Nkx2-1P50220 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC11.92□□□□□ -0.5
Nkx2-1P50220 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
Nkx2-1P50220 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Nkx2-1P50220 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Nkx2-1P50220 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC11.92□□□□□ -0.5
Nkx2-1P50220 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Nkx2-1P50220 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Nkx2-1P50220 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Nkx2-1P50220 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC11.92□□□□□ -0.5
Nkx2-1P50220 CT010506.4-201ENSMUST00000225457 351 ntBASIC11.92□□□□□ -0.5
Nkx2-1P50220 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Nkx2-1P50220 Slc25a19-212ENSMUST00000178003 2614 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
Nkx2-1P50220 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Nkx2-1P50220 Rufy3-203ENSMUST00000196894 3703 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Nkx2-1P50220 Polr2a-202ENSMUST00000071213 5799 ntTSL 5 BASIC11.92□□□□□ -0.5
Nkx2-1P50220 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Nkx2-1P50220 Wdr54-205ENSMUST00000153148 4634 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Nkx2-1P50220 Sim2-201ENSMUST00000072182 3670 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Nkx2-1P50220 BC006965-201ENSMUST00000124028 1952 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Nkx2-1P50220 Itpripl1-203ENSMUST00000154021 1753 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Nkx2-1P50220 Pax2-201ENSMUST00000004340 3095 ntTSL 5 BASIC11.92□□□□□ -0.5
Nkx2-1P50220 Dhrs3-206ENSMUST00000154208 2337 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Nkx2-1P50220 Gm38197-201ENSMUST00000192320 2122 ntBASIC11.92□□□□□ -0.5
Nkx2-1P50220 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Nkx2-1P50220 Tcn2-204ENSMUST00000109990 1914 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Nkx2-1P50220 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Nkx2-1P50220 Gtpbp1-201ENSMUST00000046463 3398 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Nkx2-1P50220 Mfn2-202ENSMUST00000105714 2427 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Nkx2-1P50220 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC11.91□□□□□ -0.5
Nkx2-1P50220 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Nkx2-1P50220 Ociad2-201ENSMUST00000087195 2554 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Nkx2-1P50220 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC11.91□□□□□ -0.5
Nkx2-1P50220 Slc52a3-201ENSMUST00000073228 2669 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Nkx2-1P50220 Kctd14-206ENSMUST00000206658 2339 ntAPPRIS P3 TSL 3 BASIC11.91□□□□□ -0.5
Nkx2-1P50220 Gm9103-201ENSMUST00000119371 405 ntBASIC11.91□□□□□ -0.5
Nkx2-1P50220 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Nkx2-1P50220 Gm28033-201ENSMUST00000184224 96 ntBASIC11.91□□□□□ -0.5
Nkx2-1P50220 Lhx1-201ENSMUST00000018842 3846 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Nkx2-1P50220 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Nkx2-1P50220 Atg16l1-201ENSMUST00000027512 3130 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
Nkx2-1P50220 Pxylp1-203ENSMUST00000119141 2768 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Nkx2-1P50220 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Nkx2-1P50220 Cobl-208ENSMUST00000172919 2566 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Nkx2-1P50220 Timp3-201ENSMUST00000020234 4722 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Nkx2-1P50220 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Nkx2-1P50220 Mmp14-206ENSMUST00000225641 3238 ntBASIC11.91□□□□□ -0.5
Nkx2-1P50220 Opa1-201ENSMUST00000038867 3230 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Nkx2-1P50220 Gm5184-201ENSMUST00000220417 1702 ntBASIC11.91□□□□□ -0.5
Nkx2-1P50220 Tmem38b-201ENSMUST00000030127 2862 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Nkx2-1P50220 Sbk1-201ENSMUST00000056028 4109 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Nkx2-1P50220 Dgki-202ENSMUST00000090314 3784 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
Nkx2-1P50220 Pik3cd-205ENSMUST00000118704 4894 ntAPPRIS ALT1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Nkx2-1P50220 Msh2-201ENSMUST00000024967 3283 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Nkx2-1P50220 Hdac10-202ENSMUST00000109347 1824 ntTSL 5 BASIC11.9□□□□□ -0.5
Nkx2-1P50220 Rbmx-202ENSMUST00000114726 2108 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Nkx2-1P50220 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC11.9□□□□□ -0.5
Nkx2-1P50220 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Nkx2-1P50220 Brd2-201ENSMUST00000025193 4374 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Nkx2-1P50220 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Nkx2-1P50220 Radil-201ENSMUST00000063635 3700 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
Nkx2-1P50220 Itgb4-203ENSMUST00000106458 5779 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
Nkx2-1P50220 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC11.9□□□□□ -0.5
Nkx2-1P50220 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Nkx2-1P50220 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Nkx2-1P50220 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC11.9□□□□□ -0.5
Nkx2-1P50220 Gm26732-201ENSMUST00000181807 2771 ntTSL 5 BASIC11.9□□□□□ -0.5
Nkx2-1P50220 Gm27646-201ENSMUST00000183989 110 ntBASIC11.9□□□□□ -0.5
Nkx2-1P50220 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC11.9□□□□□ -0.5
Nkx2-1P50220 Saa2-203ENSMUST00000210769 652 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Nkx2-1P50220 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Nkx2-1P50220 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
Nkx2-1P50220 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Nkx2-1P50220 Saa2-201ENSMUST00000075982 606 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Nkx2-1P50220 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Nkx2-1P50220 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
Nkx2-1P50220 Spr-ps1-201ENSMUST00000089584 605 ntBASIC11.9□□□□□ -0.5
Nkx2-1P50220 Gm37844-201ENSMUST00000192473 4097 ntBASIC11.9□□□□□ -0.5
Nkx2-1P50220 Slc6a7-201ENSMUST00000025520 3342 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Nkx2-1P50220 Slc19a2-202ENSMUST00000159230 3432 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Nkx2-1P50220 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC11.9□□□□□ -0.5
Nkx2-1P50220 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Nkx2-1P50220 Txnrd3-201ENSMUST00000000828 2836 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Nkx2-1P50220 Gm43570-201ENSMUST00000199951 3688 ntBASIC11.9□□□□□ -0.51
Nkx2-1P50220 Slc39a3-201ENSMUST00000059551 3680 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Nkx2-1P50220 Zfp219-201ENSMUST00000067549 2933 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.51
Nkx2-1P50220 Gm42688-201ENSMUST00000101253 3628 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.51
Nkx2-1P50220 F2r-201ENSMUST00000059193 3336 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Nkx2-1P50220 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC11.89□□□□□ -0.51
Nkx2-1P50220 Macrod2-204ENSMUST00000110062 3554 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Nkx2-1P50220 Celf3-201ENSMUST00000029784 2744 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Nkx2-1P50220 Osm-201ENSMUST00000075221 2272 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Nkx2-1P50220 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Nkx2-1P50220 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Nkx2-1P50220 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC11.89□□□□□ -0.51
Nkx2-1P50220 Ash2l-201ENSMUST00000068892 3307 ntAPPRIS P4 TSL 1 (best) BASIC11.89□□□□□ -0.51
Nkx2-1P50220 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Nkx2-1P50220 Tmem200a-201ENSMUST00000066049 4115 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Nkx2-1P50220 Gm9726-201ENSMUST00000180321 678 ntBASIC11.89□□□□□ -0.51
Nkx2-1P50220 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC11.89□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 43.4 ms