Protein–RNA interactions for Protein: P42859

Htt, Huntingtin, mousemouse

Predictions only

Length 3,119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HttP42859 Rbm3-202ENSMUST00000115615 1183 ntAPPRIS ALT1 TSL 1 (best) BASIC14.99□□□□□ -0.01
HttP42859 Rbm3-203ENSMUST00000115616 1225 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
HttP42859 Gm12201-201ENSMUST00000120657 1234 ntBASIC14.99□□□□□ -0.01
HttP42859 Gm14291-201ENSMUST00000143645 804 ntTSL 2 BASIC14.99□□□□□ -0.01
HttP42859 Lyzl6-201ENSMUST00000021328 900 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
HttP42859 Gm10608-202ENSMUST00000213924 676 ntBASIC14.99□□□□□ -0.01
HttP42859 Itm2b-204ENSMUST00000228637 783 ntBASIC14.99□□□□□ -0.01
HttP42859 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
HttP42859 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC14.99□□□□□ -0.01
HttP42859 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
HttP42859 Gm16379-201ENSMUST00000161469 348 ntBASIC14.98□□□□□ -0.01
HttP42859 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
HttP42859 Gm8762-201ENSMUST00000193486 339 ntBASIC14.98□□□□□ -0.01
HttP42859 Gm44545-201ENSMUST00000208262 746 ntBASIC14.98□□□□□ -0.01
HttP42859 Fscn2-201ENSMUST00000026445 1713 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
HttP42859 Sgce-201ENSMUST00000004750 1703 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
HttP42859 Rpl18a-201ENSMUST00000054220 1260 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
HttP42859 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
HttP42859 Tars2-204ENSMUST00000163530 2157 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
HttP42859 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
HttP42859 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
HttP42859 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
HttP42859 Gm11964-201ENSMUST00000120982 444 ntBASIC14.98□□□□□ -0.01
HttP42859 Gm12715-201ENSMUST00000121430 1128 ntBASIC14.98□□□□□ -0.01
HttP42859 AI480526-203ENSMUST00000160099 1017 ntTSL 2 BASIC14.98□□□□□ -0.01
HttP42859 Calhm3-201ENSMUST00000178630 1044 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
HttP42859 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
HttP42859 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
HttP42859 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
HttP42859 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
HttP42859 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
HttP42859 Gm5051-201ENSMUST00000204085 485 ntBASIC14.97□□□□□ -0.01
HttP42859 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
HttP42859 Car3-201ENSMUST00000029076 1679 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
HttP42859 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC14.97□□□□□ -0.01
HttP42859 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
HttP42859 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
HttP42859 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
HttP42859 Kcnq2-202ENSMUST00000049792 2920 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
HttP42859 Usp20-201ENSMUST00000061544 1360 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
HttP42859 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
HttP42859 Emd-204ENSMUST00000119197 768 ntTSL 3 BASIC14.97□□□□□ -0.01
HttP42859 Pagr1b-201ENSMUST00000172958 693 ntAPPRIS P1 TSL 3 BASIC14.97□□□□□ -0.01
HttP42859 Chfr-212ENSMUST00000200038 606 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
HttP42859 Zfp36l1-203ENSMUST00000218835 292 ntTSL 3 BASIC14.97□□□□□ -0.01
HttP42859 F2r-201ENSMUST00000059193 3336 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
HttP42859 Ankrd50-201ENSMUST00000094300 1944 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
HttP42859 Lat2-205ENSMUST00000200998 1481 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
HttP42859 Gm5779-202ENSMUST00000219564 1477 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
HttP42859 1700120C14Rik-202ENSMUST00000187967 391 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
HttP42859 Zfp709-202ENSMUST00000188374 717 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
HttP42859 Gm18027-201ENSMUST00000218947 619 ntBASIC14.97□□□□□ -0.01
HttP42859 Pfdn1-201ENSMUST00000025204 1077 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
HttP42859 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
HttP42859 Prn-201ENSMUST00000124100 2132 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
HttP42859 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
HttP42859 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
HttP42859 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
HttP42859 Pglyrp2-201ENSMUST00000114455 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
HttP42859 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
HttP42859 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
HttP42859 Mrap2-202ENSMUST00000113149 2112 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
HttP42859 Ighv1-61-201ENSMUST00000103531 351 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
HttP42859 Gm11591-201ENSMUST00000120063 702 ntBASIC14.96□□□□□ -0.01
HttP42859 Gm6407-201ENSMUST00000176468 549 ntBASIC14.96□□□□□ -0.01
HttP42859 Mfap4-202ENSMUST00000064783 1722 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
HttP42859 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
HttP42859 Ccdc166-201ENSMUST00000182172 2584 ntBASIC14.96□□□□□ -0.01
HttP42859 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
HttP42859 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC14.96□□□□□ -0.01
HttP42859 Epb41l5-201ENSMUST00000027632 2523 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
HttP42859 Prss42-201ENSMUST00000035715 1584 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
HttP42859 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
HttP42859 Gm13123-201ENSMUST00000122173 492 ntBASIC14.96□□□□□ -0.02
HttP42859 1700003G18Rik-201ENSMUST00000140689 633 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
HttP42859 Gm18584-201ENSMUST00000203098 964 ntBASIC14.96□□□□□ -0.02
HttP42859 Cenpm-202ENSMUST00000089157 1201 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
HttP42859 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
HttP42859 Sirt3-210ENSMUST00000211179 1606 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.02
HttP42859 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
HttP42859 Gm8862-201ENSMUST00000198379 1346 ntBASIC14.95□□□□□ -0.02
HttP42859 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
HttP42859 Plekhb1-203ENSMUST00000107044 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC14.95□□□□□ -0.02
HttP42859 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
HttP42859 Gm15884-201ENSMUST00000143765 643 ntTSL 3 BASIC14.95□□□□□ -0.02
HttP42859 H2al1g-201ENSMUST00000179859 509 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
HttP42859 Gm2511-202ENSMUST00000206158 455 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
HttP42859 Nme2-201ENSMUST00000021217 1012 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
HttP42859 Tmem50a-201ENSMUST00000030626 1204 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
HttP42859 Mmp21-202ENSMUST00000122136 1599 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
HttP42859 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
HttP42859 Gm16099-202ENSMUST00000151873 660 ntTSL 5 BASIC14.95□□□□□ -0.02
HttP42859 Hrc-202ENSMUST00000211327 607 ntTSL 5 BASIC14.95□□□□□ -0.02
HttP42859 Bet1l-207ENSMUST00000211527 298 ntTSL 5 BASIC14.95□□□□□ -0.02
HttP42859 Ccdc113-201ENSMUST00000041569 1288 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
HttP42859 Snf8-201ENSMUST00000006217 1004 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
HttP42859 Pin1rt1-201ENSMUST00000099659 1172 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
HttP42859 Gm14379-201ENSMUST00000128858 1878 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
HttP42859 AC163637.1-201ENSMUST00000215491 1894 ntBASIC14.95□□□□□ -0.02
HttP42859 Gm37885-201ENSMUST00000192568 1391 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 38.3 ms