Protein–RNA interactions for Protein: P41245

Mmp9, Matrix metalloproteinase-9, mousemouse

Predictions only

Length 730 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp9P41245 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Mmp9P41245 Clec11a-201ENSMUST00000004587 2978 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Mmp9P41245 Ptger3-201ENSMUST00000041175 3148 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Mmp9P41245 Kcna5-201ENSMUST00000060972 2862 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
Mmp9P41245 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC12.08□□□□□ -0.48
Mmp9P41245 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC12.08□□□□□ -0.48
Mmp9P41245 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC12.08□□□□□ -0.48
Mmp9P41245 Gm11594-201ENSMUST00000122313 162 ntBASIC12.08□□□□□ -0.48
Mmp9P41245 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC12.08□□□□□ -0.48
Mmp9P41245 Gm29019-202ENSMUST00000188623 564 ntTSL 2 BASIC12.08□□□□□ -0.48
Mmp9P41245 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Mmp9P41245 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC12.08□□□□□ -0.48
Mmp9P41245 Gm44454-201ENSMUST00000198541 138 ntBASIC12.08□□□□□ -0.48
Mmp9P41245 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Mmp9P41245 Gm9449-201ENSMUST00000207265 1011 ntBASIC12.08□□□□□ -0.48
Mmp9P41245 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC12.08□□□□□ -0.48
Mmp9P41245 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC12.08□□□□□ -0.48
Mmp9P41245 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
Mmp9P41245 Cabp7-201ENSMUST00000009219 2628 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Mmp9P41245 Plch2-201ENSMUST00000105631 5053 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Mmp9P41245 Slc38a7-204ENSMUST00000212270 3315 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Mmp9P41245 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Mmp9P41245 Spata21-201ENSMUST00000051907 2526 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Mmp9P41245 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Mmp9P41245 Ksr1-207ENSMUST00000226282 5260 ntBASIC12.08□□□□□ -0.48
Mmp9P41245 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Mmp9P41245 Ankra2-208ENSMUST00000226100 1476 ntBASIC12.08□□□□□ -0.48
Mmp9P41245 Arhgef2-229ENSMUST00000177303 3000 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Mmp9P41245 Fasn-201ENSMUST00000055655 10050 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Mmp9P41245 Snph-201ENSMUST00000028951 4730 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Mmp9P41245 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Mmp9P41245 Slc8b1-204ENSMUST00000111890 2775 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Mmp9P41245 Fbxo10-201ENSMUST00000052236 4635 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Mmp9P41245 Diaph2-207ENSMUST00000167619 8439 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Mmp9P41245 AI593442-203ENSMUST00000213937 5674 ntAPPRIS P1 TSL 2 BASIC12.07□□□□□ -0.48
Mmp9P41245 Sptb-201ENSMUST00000021458 10394 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Mmp9P41245 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Mmp9P41245 Cadm2-202ENSMUST00000120594 3248 ntAPPRIS ALT1 TSL 5 BASIC12.07□□□□□ -0.48
Mmp9P41245 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC12.07□□□□□ -0.48
Mmp9P41245 Irx6-201ENSMUST00000034185 3370 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Mmp9P41245 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Mmp9P41245 Mob1a-202ENSMUST00000055261 4412 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Mmp9P41245 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Mmp9P41245 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Mmp9P41245 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Mmp9P41245 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Mmp9P41245 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
Mmp9P41245 Gnaz-202ENSMUST00000159991 3331 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Mmp9P41245 Slc39a8-202ENSMUST00000081978 3314 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Mmp9P41245 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Mmp9P41245 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Mmp9P41245 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Mmp9P41245 Araf-203ENSMUST00000122312 2854 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Mmp9P41245 Gm26847-201ENSMUST00000180407 2109 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Mmp9P41245 Galns-203ENSMUST00000212319 2111 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Mmp9P41245 Malt1-202ENSMUST00000224056 4028 ntAPPRIS ALT2 BASIC12.07□□□□□ -0.48
Mmp9P41245 Gm12626-201ENSMUST00000117339 1983 ntBASIC12.07□□□□□ -0.48
Mmp9P41245 Gm12623-201ENSMUST00000119849 1983 ntBASIC12.07□□□□□ -0.48
Mmp9P41245 Rrp1-201ENSMUST00000062678 1984 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Mmp9P41245 Pde4a-202ENSMUST00000039413 4653 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Mmp9P41245 Gm4081-201ENSMUST00000195287 1838 ntBASIC12.07□□□□□ -0.48
Mmp9P41245 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC12.07□□□□□ -0.48
Mmp9P41245 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Mmp9P41245 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC12.06□□□□□ -0.48
Mmp9P41245 Mfsd4a-205ENSMUST00000144548 3288 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Mmp9P41245 Engase-202ENSMUST00000135383 4064 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Mmp9P41245 Wapl-205ENSMUST00000169910 4066 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Mmp9P41245 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Mmp9P41245 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Mmp9P41245 Ralgps2-214ENSMUST00000191605 2958 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Mmp9P41245 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Mmp9P41245 Nol10-201ENSMUST00000046011 3021 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Mmp9P41245 Hps3-202ENSMUST00000108321 3385 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Mmp9P41245 Dpysl4-202ENSMUST00000121184 2727 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Mmp9P41245 Actr1b-201ENSMUST00000043951 3248 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Mmp9P41245 Esm1-201ENSMUST00000038144 2097 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Mmp9P41245 Mfn2-202ENSMUST00000105714 2427 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Mmp9P41245 Tbc1d5-205ENSMUST00000224528 4764 ntAPPRIS ALT2 BASIC12.06□□□□□ -0.48
Mmp9P41245 Naa30-201ENSMUST00000037362 4464 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Mmp9P41245 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Mmp9P41245 A3galt2-202ENSMUST00000106077 2114 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Mmp9P41245 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC12.06□□□□□ -0.48
Mmp9P41245 Gm15358-201ENSMUST00000119249 520 ntBASIC12.06□□□□□ -0.48
Mmp9P41245 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC12.06□□□□□ -0.48
Mmp9P41245 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Mmp9P41245 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Mmp9P41245 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC12.06□□□□□ -0.48
Mmp9P41245 Pxn-213ENSMUST00000202564 2126 ntTSL 5 BASIC12.06□□□□□ -0.48
Mmp9P41245 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC12.06□□□□□ -0.48
Mmp9P41245 AC122024.2-201ENSMUST00000220086 871 ntBASIC12.06□□□□□ -0.48
Mmp9P41245 AC138767.1-201ENSMUST00000222661 415 ntBASIC12.06□□□□□ -0.48
Mmp9P41245 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
Mmp9P41245 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Mmp9P41245 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Mmp9P41245 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC12.06□□□□□ -0.48
Mmp9P41245 AU040320-202ENSMUST00000102607 4191 ntAPPRIS P4 TSL 1 (best) BASIC12.06□□□□□ -0.48
Mmp9P41245 Fam19a2-201ENSMUST00000050756 4364 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Mmp9P41245 Arid4b-202ENSMUST00000110533 3020 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Mmp9P41245 Rbl2-208ENSMUST00000209518 4792 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Mmp9P41245 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 36.7 ms