Protein–RNA interactions for Protein: P39038

Cdh4, Cadherin-4, mousemouse

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh4P39038 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
Cdh4P39038 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
Cdh4P39038 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Cdh4P39038 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Cdh4P39038 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cdh4P39038 Pcdhga8-201ENSMUST00000066149 4730 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cdh4P39038 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
Cdh4P39038 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
Cdh4P39038 Ydjc-202ENSMUST00000115702 1713 ntTSL 5 BASIC13.76□□□□□ -0.21
Cdh4P39038 Usp20-202ENSMUST00000102849 5088 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cdh4P39038 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cdh4P39038 Gm9252-201ENSMUST00000172364 1602 ntBASIC13.76□□□□□ -0.21
Cdh4P39038 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
Cdh4P39038 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cdh4P39038 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC13.76□□□□□ -0.21
Cdh4P39038 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
Cdh4P39038 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cdh4P39038 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cdh4P39038 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC13.76□□□□□ -0.21
Cdh4P39038 Gm13616-201ENSMUST00000120600 222 ntBASIC13.76□□□□□ -0.21
Cdh4P39038 Abhd11os-201ENSMUST00000136022 604 ntTSL 2 BASIC13.76□□□□□ -0.21
Cdh4P39038 Cd3g-201ENSMUST00000002101 1023 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cdh4P39038 AC124732.2-201ENSMUST00000221977 316 ntBASIC13.76□□□□□ -0.21
Cdh4P39038 Ggn-201ENSMUST00000033886 588 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Cdh4P39038 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
Cdh4P39038 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC13.76□□□□□ -0.21
Cdh4P39038 Gm6471-201ENSMUST00000097935 805 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Cdh4P39038 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Cdh4P39038 Lmx1b-201ENSMUST00000041730 4790 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cdh4P39038 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cdh4P39038 Gm45546-201ENSMUST00000211053 2394 ntBASIC13.76□□□□□ -0.21
Cdh4P39038 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cdh4P39038 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC13.76□□□□□ -0.21
Cdh4P39038 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cdh4P39038 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cdh4P39038 Sptb-201ENSMUST00000021458 10394 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cdh4P39038 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC13.76□□□□□ -0.21
Cdh4P39038 Zmym3-208ENSMUST00000121429 1890 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Cdh4P39038 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
Cdh4P39038 Olfr317-202ENSMUST00000215513 2769 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
Cdh4P39038 Ap4b1-207ENSMUST00000200377 1823 ntTSL 5 BASIC13.76□□□□□ -0.21
Cdh4P39038 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cdh4P39038 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cdh4P39038 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
Cdh4P39038 Klhdc4-210ENSMUST00000174717 1662 ntTSL 5 BASIC13.75□□□□□ -0.21
Cdh4P39038 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Cdh4P39038 Gm26882-201ENSMUST00000181611 1537 ntTSL 5 BASIC13.75□□□□□ -0.21
Cdh4P39038 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cdh4P39038 Gm13517-201ENSMUST00000120782 1495 ntBASIC13.75□□□□□ -0.21
Cdh4P39038 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cdh4P39038 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cdh4P39038 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cdh4P39038 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cdh4P39038 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC13.75□□□□□ -0.21
Cdh4P39038 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC13.75□□□□□ -0.21
Cdh4P39038 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC13.75□□□□□ -0.21
Cdh4P39038 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
Cdh4P39038 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cdh4P39038 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Cdh4P39038 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC13.75□□□□□ -0.21
Cdh4P39038 Mir124-2hg-206ENSMUST00000189754 525 ntTSL 3 BASIC13.75□□□□□ -0.21
Cdh4P39038 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC13.75□□□□□ -0.21
Cdh4P39038 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cdh4P39038 AI593442-203ENSMUST00000213937 5674 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
Cdh4P39038 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cdh4P39038 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cdh4P39038 Ralgapb-203ENSMUST00000109486 8383 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cdh4P39038 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cdh4P39038 Dusp13-201ENSMUST00000075040 1745 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cdh4P39038 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cdh4P39038 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC13.75□□□□□ -0.21
Cdh4P39038 Fasn-201ENSMUST00000055655 10050 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cdh4P39038 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cdh4P39038 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cdh4P39038 Arxes2-201ENSMUST00000058119 1532 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
Cdh4P39038 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Cdh4P39038 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Cdh4P39038 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
Cdh4P39038 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Cdh4P39038 Satb2-201ENSMUST00000042857 6277 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Cdh4P39038 Crhr2-209ENSMUST00000213026 1443 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Cdh4P39038 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Cdh4P39038 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
Cdh4P39038 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Cdh4P39038 Irs1-201ENSMUST00000069799 9144 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Cdh4P39038 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Cdh4P39038 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Cdh4P39038 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC13.74□□□□□ -0.21
Cdh4P39038 Zfyve27-207ENSMUST00000169536 5611 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
Cdh4P39038 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC13.74□□□□□ -0.21
Cdh4P39038 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Cdh4P39038 Mmab-202ENSMUST00000112245 644 ntTSL 3 BASIC13.74□□□□□ -0.21
Cdh4P39038 Ppil3-203ENSMUST00000114348 1033 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Cdh4P39038 Gm12134-201ENSMUST00000122109 520 ntBASIC13.74□□□□□ -0.21
Cdh4P39038 Gm11899-201ENSMUST00000142373 745 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Cdh4P39038 1700021F05Rik-202ENSMUST00000147196 860 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Cdh4P39038 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC13.74□□□□□ -0.21
Cdh4P39038 Il31-201ENSMUST00000031389 806 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Cdh4P39038 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Cdh4P39038 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC13.74□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 40 ms