Protein–RNA interactions for Protein: P25318

Col8a2, Collagen alpha-2(VIII) chain, mousemouse

Predictions only

Length 699 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a2P25318 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Col8a2P25318 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Col8a2P25318 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Col8a2P25318 Tssk4-202ENSMUST00000164809 1686 ntTSL 1 (best) BASIC12□□□□□ -0.49
Col8a2P25318 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Col8a2P25318 Gpr137-205ENSMUST00000166115 1845 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Col8a2P25318 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Col8a2P25318 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Col8a2P25318 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Col8a2P25318 AC154231.1-201ENSMUST00000220564 2175 ntBASIC11.99□□□□□ -0.49
Col8a2P25318 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Col8a2P25318 Madd-201ENSMUST00000066420 3753 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Col8a2P25318 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Col8a2P25318 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Col8a2P25318 Yap1-201ENSMUST00000065353 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Col8a2P25318 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Col8a2P25318 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC11.99□□□□□ -0.49
Col8a2P25318 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Col8a2P25318 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Col8a2P25318 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Col8a2P25318 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC11.99□□□□□ -0.49
Col8a2P25318 Mroh1-217ENSMUST00000162319 1244 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Col8a2P25318 Mpv17-203ENSMUST00000200833 1171 ntTSL 5 BASIC11.99□□□□□ -0.49
Col8a2P25318 Gm30191-201ENSMUST00000205501 647 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Col8a2P25318 Gm10747-201ENSMUST00000217799 1014 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Col8a2P25318 Gm9182-201ENSMUST00000217829 639 ntBASIC11.99□□□□□ -0.49
Col8a2P25318 Cenpm-201ENSMUST00000089155 1109 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Col8a2P25318 Dusp13-202ENSMUST00000119866 1342 ntTSL 5 BASIC11.99□□□□□ -0.49
Col8a2P25318 Gm6263-201ENSMUST00000120029 1342 ntBASIC11.99□□□□□ -0.49
Col8a2P25318 Gm45667-201ENSMUST00000210380 1316 ntBASIC11.99□□□□□ -0.49
Col8a2P25318 Dap3-207ENSMUST00000173135 1409 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Col8a2P25318 4930425O10Rik-201ENSMUST00000197761 1418 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Col8a2P25318 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Col8a2P25318 Cldn14-201ENSMUST00000050962 1457 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Col8a2P25318 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Col8a2P25318 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC11.99□□□□□ -0.49
Col8a2P25318 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC11.99□□□□□ -0.49
Col8a2P25318 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Col8a2P25318 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Col8a2P25318 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC11.99□□□□□ -0.49
Col8a2P25318 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Col8a2P25318 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Col8a2P25318 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Col8a2P25318 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Col8a2P25318 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Col8a2P25318 Pgr-201ENSMUST00000070463 3068 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Col8a2P25318 Pgr-202ENSMUST00000098986 3068 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Col8a2P25318 Epha1-201ENSMUST00000073387 3273 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Col8a2P25318 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC11.98□□□□□ -0.49
Col8a2P25318 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
Col8a2P25318 1700029J07Rik-201ENSMUST00000095323 2740 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Col8a2P25318 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Col8a2P25318 Map3k8-201ENSMUST00000025078 2507 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Col8a2P25318 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Col8a2P25318 Tom1-202ENSMUST00000165630 2267 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Col8a2P25318 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Col8a2P25318 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Col8a2P25318 Gnpda2-201ENSMUST00000031117 1894 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Col8a2P25318 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Col8a2P25318 Tex44-201ENSMUST00000046004 1724 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
Col8a2P25318 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Col8a2P25318 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Col8a2P25318 Gm16137-201ENSMUST00000161571 664 ntTSL 5 BASIC11.98□□□□□ -0.49
Col8a2P25318 Cox6b2-203ENSMUST00000182111 585 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Col8a2P25318 Gm45453-201ENSMUST00000211758 853 ntBASIC11.98□□□□□ -0.49
Col8a2P25318 CT025535.1-201ENSMUST00000227172 491 ntBASIC11.98□□□□□ -0.49
Col8a2P25318 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Col8a2P25318 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Col8a2P25318 Nr4a2-203ENSMUST00000112629 3422 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Col8a2P25318 Mapk7-202ENSMUST00000101085 3254 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Col8a2P25318 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Col8a2P25318 Enpp1-203ENSMUST00000135846 2721 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Col8a2P25318 Mtif2-202ENSMUST00000093239 2741 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Col8a2P25318 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC11.98□□□□□ -0.49
Col8a2P25318 Pde8a-201ENSMUST00000026672 3802 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Col8a2P25318 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Col8a2P25318 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Col8a2P25318 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Col8a2P25318 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Col8a2P25318 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Col8a2P25318 Apln-201ENSMUST00000039026 3149 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Col8a2P25318 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Col8a2P25318 Cnot7-201ENSMUST00000034012 2615 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Col8a2P25318 Btbd10-201ENSMUST00000047091 2581 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Col8a2P25318 Pdgfrl-201ENSMUST00000034004 1548 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Col8a2P25318 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Col8a2P25318 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Col8a2P25318 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC11.97□□□□□ -0.49
Col8a2P25318 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Col8a2P25318 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Col8a2P25318 Sirt3-202ENSMUST00000106048 1416 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Col8a2P25318 Gapdh-203ENSMUST00000118875 1420 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Col8a2P25318 Zfp467-205ENSMUST00000114560 3266 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Col8a2P25318 Rplp0-201ENSMUST00000086519 1358 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Col8a2P25318 Gm10044-201ENSMUST00000081331 1312 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Col8a2P25318 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Col8a2P25318 Dusp14-203ENSMUST00000108101 1082 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Col8a2P25318 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC11.97□□□□□ -0.49
Col8a2P25318 Gm11773-201ENSMUST00000138256 497 ntTSL 2 BASIC11.97□□□□□ -0.49
Col8a2P25318 Tmem262-201ENSMUST00000143303 545 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 35.1 ms