Protein–RNA interactions for Protein: P03953

Cfd, Complement factor D, mousemouse

Predictions only

Length 259 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CfdP03953 Gm4691-201ENSMUST00000182339 1000 ntBASIC12.01□□□□□ -0.49
CfdP03953 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
CfdP03953 Gm2451-201ENSMUST00000199447 999 ntBASIC12.01□□□□□ -0.49
CfdP03953 Gm10290-201ENSMUST00000200451 999 ntBASIC12.01□□□□□ -0.49
CfdP03953 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
CfdP03953 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
CfdP03953 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
CfdP03953 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC12.01□□□□□ -0.49
CfdP03953 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
CfdP03953 Gm26593-201ENSMUST00000181848 1970 ntTSL 5 BASIC12.01□□□□□ -0.49
CfdP03953 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC12.01□□□□□ -0.49
CfdP03953 Gid4-201ENSMUST00000070681 4283 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
CfdP03953 Szrd1-203ENSMUST00000102487 3244 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
CfdP03953 Stau2-215ENSMUST00000162435 2735 ntTSL 5 BASIC12.01□□□□□ -0.49
CfdP03953 Acox3-204ENSMUST00000114238 2825 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
CfdP03953 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
CfdP03953 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
CfdP03953 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
CfdP03953 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC12□□□□□ -0.49
CfdP03953 Hsd3b7-203ENSMUST00000106272 1725 ntTSL 5 BASIC12□□□□□ -0.49
CfdP03953 Eno1b-201ENSMUST00000076155 1757 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
CfdP03953 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
CfdP03953 Pgm5-201ENSMUST00000047666 3239 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
CfdP03953 Reps2-202ENSMUST00000112334 7675 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
CfdP03953 Vars-201ENSMUST00000087315 4137 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
CfdP03953 1810030O07Rik-201ENSMUST00000060108 2699 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
CfdP03953 Pef1-202ENSMUST00000118199 1915 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
CfdP03953 Map2k7-206ENSMUST00000110998 3497 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
CfdP03953 Il11ra1-203ENSMUST00000108041 1953 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
CfdP03953 Pbx2-203ENSMUST00000173328 1990 ntTSL 2 BASIC12□□□□□ -0.49
CfdP03953 Gm13305-201ENSMUST00000098121 1953 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
CfdP03953 Fbxl19-202ENSMUST00000186116 3641 ntTSL 5 BASIC12□□□□□ -0.49
CfdP03953 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
CfdP03953 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
CfdP03953 Gm13836-201ENSMUST00000121159 501 ntBASIC12□□□□□ -0.49
CfdP03953 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC12□□□□□ -0.49
CfdP03953 Gm23634-201ENSMUST00000175071 91 ntBASIC12□□□□□ -0.49
CfdP03953 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC12□□□□□ -0.49
CfdP03953 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC12□□□□□ -0.49
CfdP03953 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC12□□□□□ -0.49
CfdP03953 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC12□□□□□ -0.49
CfdP03953 Rbfox2-207ENSMUST00000227533 1041 ntBASIC12□□□□□ -0.49
CfdP03953 AC147366.1-201ENSMUST00000227671 852 ntBASIC12□□□□□ -0.49
CfdP03953 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC12□□□□□ -0.49
CfdP03953 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC12□□□□□ -0.49
CfdP03953 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC12□□□□□ -0.49
CfdP03953 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
CfdP03953 Elk3-201ENSMUST00000008542 4212 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
CfdP03953 Arhgef1-202ENSMUST00000098683 3375 ntAPPRIS P4 TSL 1 (best) BASIC12□□□□□ -0.49
CfdP03953 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC12□□□□□ -0.49
CfdP03953 Phldb1-201ENSMUST00000034611 5461 ntTSL 1 (best) BASIC12□□□□□ -0.49
CfdP03953 Gm14371-201ENSMUST00000138925 1518 ntBASIC12□□□□□ -0.49
CfdP03953 AC139054.1-201ENSMUST00000226898 1598 ntBASIC12□□□□□ -0.49
CfdP03953 Gm9252-201ENSMUST00000172364 1602 ntBASIC12□□□□□ -0.49
CfdP03953 AC131743.5-201ENSMUST00000220775 1618 ntBASIC12□□□□□ -0.49
CfdP03953 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC12□□□□□ -0.49
CfdP03953 Cpne1-201ENSMUST00000079312 1683 ntTSL 5 BASIC12□□□□□ -0.49
CfdP03953 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC12□□□□□ -0.49
CfdP03953 Arid4b-202ENSMUST00000110533 3020 ntTSL 1 (best) BASIC12□□□□□ -0.49
CfdP03953 Cuedc2-201ENSMUST00000051234 1833 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
CfdP03953 Ppp2r5c-201ENSMUST00000084985 1847 ntAPPRIS P1 TSL 2 BASIC12□□□□□ -0.49
CfdP03953 Pde4d-203ENSMUST00000117420 1955 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
CfdP03953 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
CfdP03953 Pcdhga8-201ENSMUST00000066149 4730 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
CfdP03953 Gpsm2-201ENSMUST00000029482 3498 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
CfdP03953 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
CfdP03953 Maged2-204ENSMUST00000112700 2107 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
CfdP03953 Abcg4-208ENSMUST00000161354 3999 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
CfdP03953 AU040320-202ENSMUST00000102607 4191 ntAPPRIS P4 TSL 1 (best) BASIC11.99□□□□□ -0.49
CfdP03953 Etl4-208ENSMUST00000114614 5898 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
CfdP03953 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
CfdP03953 Mob1a-202ENSMUST00000055261 4412 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
CfdP03953 Gm37861-201ENSMUST00000193534 2869 ntBASIC11.99□□□□□ -0.49
CfdP03953 Ap2m1-201ENSMUST00000007216 2937 ntAPPRIS P3 TSL 5 BASIC11.99□□□□□ -0.49
CfdP03953 Cbarp-214ENSMUST00000169546 2980 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
CfdP03953 Ube3b-201ENSMUST00000074002 5194 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
CfdP03953 Itgb3-201ENSMUST00000021028 5784 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
CfdP03953 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC11.99□□□□□ -0.49
CfdP03953 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
CfdP03953 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
CfdP03953 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
CfdP03953 Gm5682-201ENSMUST00000173402 505 ntBASIC11.99□□□□□ -0.49
CfdP03953 Gm6728-201ENSMUST00000178117 1065 ntBASIC11.99□□□□□ -0.49
CfdP03953 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
CfdP03953 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
CfdP03953 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
CfdP03953 Atp13a2-203ENSMUST00000127833 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
CfdP03953 Sipa1-201ENSMUST00000071857 3868 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
CfdP03953 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC11.99□□□□□ -0.49
CfdP03953 Vdac3-201ENSMUST00000009036 1354 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
CfdP03953 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
CfdP03953 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
CfdP03953 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
CfdP03953 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
CfdP03953 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
CfdP03953 Spo11-201ENSMUST00000050442 1709 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
CfdP03953 Fam110b-209ENSMUST00000171403 1754 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
CfdP03953 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
CfdP03953 Iqgap1-201ENSMUST00000167377 7444 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
CfdP03953 Obsl1-201ENSMUST00000113565 3379 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 50.2 ms