Protein–RNA interactions for Protein: O35604

Npc1, Niemann-Pick C1 protein, mousemouse

Predictions only

Length 1,277 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npc1O35604 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Npc1O35604 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Npc1O35604 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Npc1O35604 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC14.04□□□□□ -0.16
Npc1O35604 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Npc1O35604 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Npc1O35604 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Npc1O35604 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Npc1O35604 Metrnl-202ENSMUST00000106089 1101 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Npc1O35604 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Npc1O35604 Hras-203ENSMUST00000124314 1073 ntTSL 5 BASIC14.04□□□□□ -0.16
Npc1O35604 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Npc1O35604 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Npc1O35604 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Npc1O35604 Gm10044-204ENSMUST00000170177 659 ntTSL 3 BASIC14.04□□□□□ -0.16
Npc1O35604 Gm7030-203ENSMUST00000173322 913 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Npc1O35604 Styxl1-207ENSMUST00000177559 1236 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Npc1O35604 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC14.04□□□□□ -0.16
Npc1O35604 Gm26771-201ENSMUST00000180472 1082 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Npc1O35604 Gm10576-201ENSMUST00000191927 825 ntBASIC14.04□□□□□ -0.16
Npc1O35604 Olfr286-202ENSMUST00000205305 969 ntBASIC14.04□□□□□ -0.16
Npc1O35604 Gm10747-201ENSMUST00000217799 1014 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Npc1O35604 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC14.04□□□□□ -0.16
Npc1O35604 Smim8-201ENSMUST00000029972 786 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Npc1O35604 Gm7030-201ENSMUST00000046131 913 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Npc1O35604 Lrif1-202ENSMUST00000098751 929 ntTSL 2 BASIC14.04□□□□□ -0.16
Npc1O35604 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC14.04□□□□□ -0.16
Npc1O35604 Crhr2-209ENSMUST00000213026 1443 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Npc1O35604 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Npc1O35604 Insr-201ENSMUST00000091291 9355 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Npc1O35604 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Npc1O35604 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Npc1O35604 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Npc1O35604 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Npc1O35604 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Npc1O35604 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Npc1O35604 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Npc1O35604 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Npc1O35604 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Npc1O35604 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Npc1O35604 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Npc1O35604 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Npc1O35604 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Npc1O35604 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC14.03□□□□□ -0.16
Npc1O35604 Gm6415-201ENSMUST00000118488 348 ntBASIC14.03□□□□□ -0.16
Npc1O35604 Auts2-212ENSMUST00000178555 309 ntBASIC14.03□□□□□ -0.16
Npc1O35604 Ggn-201ENSMUST00000033886 588 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Npc1O35604 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Npc1O35604 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Npc1O35604 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Npc1O35604 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Npc1O35604 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Npc1O35604 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Npc1O35604 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Npc1O35604 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC14.03□□□□□ -0.16
Npc1O35604 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Npc1O35604 Trmt10c-201ENSMUST00000059052 3002 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Npc1O35604 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Npc1O35604 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Npc1O35604 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Npc1O35604 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC14.02□□□□□ -0.16
Npc1O35604 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Npc1O35604 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Npc1O35604 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Npc1O35604 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Npc1O35604 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC14.02□□□□□ -0.16
Npc1O35604 Fars2-208ENSMUST00000224611 1750 ntAPPRIS P1 BASIC14.02□□□□□ -0.16
Npc1O35604 Mybl1-201ENSMUST00000088658 4980 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Npc1O35604 Jakmip3-201ENSMUST00000106111 1571 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
Npc1O35604 AC154767.3-201ENSMUST00000225150 1342 ntBASIC14.02□□□□□ -0.17
Npc1O35604 Mcee-203ENSMUST00000206194 532 ntTSL 2 BASIC14.02□□□□□ -0.17
Npc1O35604 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
Npc1O35604 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Npc1O35604 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Npc1O35604 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC14.02□□□□□ -0.17
Npc1O35604 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
Npc1O35604 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Npc1O35604 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
Npc1O35604 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC14.02□□□□□ -0.17
Npc1O35604 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
Npc1O35604 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Npc1O35604 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC14.01□□□□□ -0.17
Npc1O35604 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Npc1O35604 Gm6756-201ENSMUST00000180647 1620 ntBASIC14.01□□□□□ -0.17
Npc1O35604 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Npc1O35604 Hsd17b14-201ENSMUST00000107752 1400 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Npc1O35604 Itfg1-201ENSMUST00000034140 3306 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Npc1O35604 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Npc1O35604 Mmab-202ENSMUST00000112245 644 ntTSL 3 BASIC14.01□□□□□ -0.17
Npc1O35604 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Npc1O35604 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC14.01□□□□□ -0.17
Npc1O35604 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC14.01□□□□□ -0.17
Npc1O35604 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Npc1O35604 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Npc1O35604 Cyhr1-201ENSMUST00000066677 1163 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Npc1O35604 Gpbar1-201ENSMUST00000077985 1075 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Npc1O35604 Olfr615-201ENSMUST00000098198 942 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Npc1O35604 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Npc1O35604 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Npc1O35604 Rassf10-201ENSMUST00000182858 3496 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 42 ms