Protein–RNA interactions for Protein: O35451

Atf6b, Cyclic AMP-dependent transcription factor ATF-6 beta, mousemouse

Predictions only

Length 699 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf6bO35451 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Atf6bO35451 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Atf6bO35451 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Atf6bO35451 Tspan11-201ENSMUST00000032501 5188 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Atf6bO35451 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Atf6bO35451 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC12.5□□□□□ -0.41
Atf6bO35451 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC12.5□□□□□ -0.41
Atf6bO35451 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC12.5□□□□□ -0.41
Atf6bO35451 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC12.5□□□□□ -0.41
Atf6bO35451 Gm15483-201ENSMUST00000120338 456 ntBASIC12.5□□□□□ -0.41
Atf6bO35451 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Atf6bO35451 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Atf6bO35451 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Atf6bO35451 Gm18889-201ENSMUST00000174284 929 ntBASIC12.5□□□□□ -0.41
Atf6bO35451 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Atf6bO35451 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
Atf6bO35451 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC12.5□□□□□ -0.41
Atf6bO35451 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Atf6bO35451 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC12.5□□□□□ -0.41
Atf6bO35451 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Atf6bO35451 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC12.5□□□□□ -0.41
Atf6bO35451 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC12.5□□□□□ -0.41
Atf6bO35451 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Atf6bO35451 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Atf6bO35451 Mfrp-202ENSMUST00000161381 4254 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Atf6bO35451 Commd10-201ENSMUST00000049388 1561 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Atf6bO35451 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Atf6bO35451 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Atf6bO35451 Knop1-204ENSMUST00000106550 5524 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Atf6bO35451 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Atf6bO35451 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Atf6bO35451 Gm5357-201ENSMUST00000212720 1924 ntBASIC12.5□□□□□ -0.41
Atf6bO35451 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Atf6bO35451 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Atf6bO35451 Dnajb5-204ENSMUST00000107973 2300 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Atf6bO35451 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Atf6bO35451 Mpped1-203ENSMUST00000109470 3281 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Atf6bO35451 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Atf6bO35451 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Atf6bO35451 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Atf6bO35451 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Atf6bO35451 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Atf6bO35451 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Atf6bO35451 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Atf6bO35451 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Atf6bO35451 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Atf6bO35451 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Atf6bO35451 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Atf6bO35451 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Atf6bO35451 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Atf6bO35451 Nudt18-203ENSMUST00000228768 1578 ntBASIC12.49□□□□□ -0.41
Atf6bO35451 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC12.49□□□□□ -0.41
Atf6bO35451 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Atf6bO35451 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Atf6bO35451 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC12.49□□□□□ -0.41
Atf6bO35451 Klk10-201ENSMUST00000014058 1373 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Atf6bO35451 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Atf6bO35451 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Atf6bO35451 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
Atf6bO35451 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
Atf6bO35451 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Atf6bO35451 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Atf6bO35451 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC12.49□□□□□ -0.41
Atf6bO35451 Gm11543-201ENSMUST00000120758 370 ntBASIC12.49□□□□□ -0.41
Atf6bO35451 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Atf6bO35451 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Atf6bO35451 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC12.49□□□□□ -0.41
Atf6bO35451 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC12.49□□□□□ -0.41
Atf6bO35451 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC12.49□□□□□ -0.41
Atf6bO35451 Cep126-201ENSMUST00000037397 3819 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Atf6bO35451 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Atf6bO35451 Rims1-201ENSMUST00000081544 5954 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Atf6bO35451 P3h2-201ENSMUST00000039990 3283 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Atf6bO35451 Gpr157-201ENSMUST00000094451 4900 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Atf6bO35451 Pcdh19-202ENSMUST00000149154 10289 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Atf6bO35451 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC12.49□□□□□ -0.41
Atf6bO35451 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Atf6bO35451 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC12.49□□□□□ -0.41
Atf6bO35451 Gm37691-201ENSMUST00000192147 2573 ntBASIC12.49□□□□□ -0.41
Atf6bO35451 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Atf6bO35451 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Atf6bO35451 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
Atf6bO35451 Esyt1-201ENSMUST00000026427 3981 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Atf6bO35451 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Atf6bO35451 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Atf6bO35451 Abl2-201ENSMUST00000027888 3549 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Atf6bO35451 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC12.49□□□□□ -0.41
Atf6bO35451 Arhgef17-201ENSMUST00000107032 10190 ntAPPRIS P2 TSL 5 BASIC12.48□□□□□ -0.41
Atf6bO35451 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC12.48□□□□□ -0.41
Atf6bO35451 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Atf6bO35451 Bcl2-201ENSMUST00000112751 7191 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Atf6bO35451 Alg10b-201ENSMUST00000100309 3727 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Atf6bO35451 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Atf6bO35451 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC12.48□□□□□ -0.41
Atf6bO35451 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
Atf6bO35451 St8sia3-201ENSMUST00000025477 6282 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Atf6bO35451 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC12.48□□□□□ -0.41
Atf6bO35451 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC12.48□□□□□ -0.41
Atf6bO35451 Kif9-204ENSMUST00000198043 2233 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Atf6bO35451 Erich6-201ENSMUST00000041115 2195 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 42 ms