Protein–RNA interactions for Protein: O08983

Hps1, Hermansky-Pudlak syndrome 1 protein homolog, mousemouse

Predictions only

Length 704 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hps1O08983 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Hps1O08983 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Hps1O08983 Srrm1-203ENSMUST00000105861 3797 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Hps1O08983 Fbxl12-205ENSMUST00000140702 1555 ntBASIC13.38□□□□□ -0.27
Hps1O08983 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Hps1O08983 Tmem97-201ENSMUST00000103242 1375 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Hps1O08983 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Hps1O08983 Il7-205ENSMUST00000194279 4858 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Hps1O08983 Rnf168-201ENSMUST00000014218 3932 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Hps1O08983 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Hps1O08983 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
Hps1O08983 Gm15358-201ENSMUST00000119249 520 ntBASIC13.38□□□□□ -0.27
Hps1O08983 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC13.38□□□□□ -0.27
Hps1O08983 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC13.38□□□□□ -0.27
Hps1O08983 Gm25911-201ENSMUST00000157621 56 ntBASIC13.38□□□□□ -0.27
Hps1O08983 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Hps1O08983 Ick-203ENSMUST00000117330 2698 ntAPPRIS ALT2 TSL 2 BASIC13.38□□□□□ -0.27
Hps1O08983 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Hps1O08983 Adcyap1r1-202ENSMUST00000070756 6107 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Hps1O08983 2810402E24Rik-201ENSMUST00000190699 3040 ntBASIC13.38□□□□□ -0.27
Hps1O08983 Ccdc85a-204ENSMUST00000109502 5220 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Hps1O08983 Gk5-202ENSMUST00000122383 4455 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Hps1O08983 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC13.38□□□□□ -0.27
Hps1O08983 Ntrk2-209ENSMUST00000225950 2640 ntBASIC13.38□□□□□ -0.27
Hps1O08983 Dnajc5-201ENSMUST00000072334 6578 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Hps1O08983 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Hps1O08983 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Hps1O08983 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
Hps1O08983 D6Ertd527e-204ENSMUST00000204927 2218 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Hps1O08983 Plcb1-202ENSMUST00000110116 7003 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Hps1O08983 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Hps1O08983 Fgfr1-202ENSMUST00000117179 4046 ntAPPRIS ALT1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Hps1O08983 Nfatc2-204ENSMUST00000109184 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Hps1O08983 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Hps1O08983 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Hps1O08983 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Hps1O08983 Fam53b-201ENSMUST00000065371 5052 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Hps1O08983 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC13.37□□□□□ -0.27
Hps1O08983 Iffo2-201ENSMUST00000040023 5227 ntAPPRIS P3 TSL 5 BASIC13.37□□□□□ -0.27
Hps1O08983 Prss36-201ENSMUST00000094026 3061 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Hps1O08983 Celf4-206ENSMUST00000224553 1729 ntBASIC13.37□□□□□ -0.27
Hps1O08983 Cluh-202ENSMUST00000117818 4284 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Hps1O08983 Hk1-202ENSMUST00000099691 4278 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Hps1O08983 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Hps1O08983 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC13.37□□□□□ -0.27
Hps1O08983 Sfxn5-203ENSMUST00000113787 638 ntTSL 2 BASIC13.37□□□□□ -0.27
Hps1O08983 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC13.37□□□□□ -0.27
Hps1O08983 Gm13849-201ENSMUST00000153328 835 ntTSL 5 BASIC13.37□□□□□ -0.27
Hps1O08983 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC13.37□□□□□ -0.27
Hps1O08983 Gm8318-201ENSMUST00000182954 872 ntBASIC13.37□□□□□ -0.27
Hps1O08983 AC158982.1-201ENSMUST00000228377 901 ntBASIC13.37□□□□□ -0.27
Hps1O08983 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
Hps1O08983 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Hps1O08983 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC13.37□□□□□ -0.27
Hps1O08983 Gm10175-201ENSMUST00000086013 645 ntBASIC13.37□□□□□ -0.27
Hps1O08983 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Hps1O08983 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC13.37□□□□□ -0.27
Hps1O08983 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Hps1O08983 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Hps1O08983 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Hps1O08983 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Hps1O08983 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Hps1O08983 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Hps1O08983 Sp9-201ENSMUST00000090813 4514 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Hps1O08983 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Hps1O08983 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Hps1O08983 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Hps1O08983 Erich6-201ENSMUST00000041115 2195 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Hps1O08983 Arid3a-201ENSMUST00000019708 5361 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Hps1O08983 Supt6-201ENSMUST00000002121 6488 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Hps1O08983 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Hps1O08983 Camsap3-202ENSMUST00000171962 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Hps1O08983 AC157650.3-201ENSMUST00000225058 1476 ntBASIC13.36□□□□□ -0.27
Hps1O08983 Fnbp4-201ENSMUST00000013759 4691 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Hps1O08983 Cacna1g-204ENSMUST00000107785 7523 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Hps1O08983 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Hps1O08983 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Hps1O08983 Gm37844-201ENSMUST00000192473 4097 ntBASIC13.36□□□□□ -0.27
Hps1O08983 Nacc1-201ENSMUST00000001975 4300 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Hps1O08983 Gtse1-201ENSMUST00000170629 2721 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Hps1O08983 Tbr1-201ENSMUST00000048934 3977 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Hps1O08983 Trpm4-201ENSMUST00000042194 4234 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Hps1O08983 Gcfc2-201ENSMUST00000043195 4192 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Hps1O08983 Zfp219-201ENSMUST00000067549 2933 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Hps1O08983 Syngap1-201ENSMUST00000081285 4315 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Hps1O08983 Psmb5-ps-201ENSMUST00000119744 798 ntBASIC13.36□□□□□ -0.27
Hps1O08983 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC13.36□□□□□ -0.27
Hps1O08983 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Hps1O08983 Gm5253-201ENSMUST00000187104 1025 ntBASIC13.36□□□□□ -0.27
Hps1O08983 AC159114.1-201ENSMUST00000220349 266 ntBASIC13.36□□□□□ -0.27
Hps1O08983 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Hps1O08983 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Hps1O08983 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Hps1O08983 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Hps1O08983 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Hps1O08983 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Hps1O08983 Mecom-206ENSMUST00000172694 4381 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Hps1O08983 Rbm47-201ENSMUST00000094756 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Hps1O08983 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC13.36□□□□□ -0.27
Hps1O08983 Rbl1-201ENSMUST00000029170 4862 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 32.8 ms