Protein–RNA interactions for Protein: D3YZU1

Shank1, SH3 and multiple ankyrin repeat domains protein 1, mousemouse

Predictions only

Length 2,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shank1D3YZU1 2810006K23Rik-202ENSMUST00000111477 1637 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Shank1D3YZU1 Ice2-203ENSMUST00000117610 800 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Shank1D3YZU1 Gm14660-201ENSMUST00000119809 575 ntBASIC12.86□□□□□ -0.35
Shank1D3YZU1 Gm5912-201ENSMUST00000122282 1438 ntBASIC12.86□□□□□ -0.35
Shank1D3YZU1 Gm13112-201ENSMUST00000138795 1258 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Shank1D3YZU1 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Shank1D3YZU1 Adgrg5-205ENSMUST00000166802 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Shank1D3YZU1 Syce3-202ENSMUST00000167959 480 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Shank1D3YZU1 Mir7654-201ENSMUST00000185082 70 ntBASIC12.86□□□□□ -0.35
Shank1D3YZU1 AC121804.3-201ENSMUST00000223420 295 ntBASIC12.86□□□□□ -0.35
Shank1D3YZU1 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Shank1D3YZU1 Batf3-201ENSMUST00000027943 801 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Shank1D3YZU1 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Shank1D3YZU1 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Shank1D3YZU1 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Shank1D3YZU1 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Shank1D3YZU1 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Shank1D3YZU1 Cpeb3-204ENSMUST00000126188 4224 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Shank1D3YZU1 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Shank1D3YZU1 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Shank1D3YZU1 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Shank1D3YZU1 Ildr2-201ENSMUST00000111416 8251 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Shank1D3YZU1 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Shank1D3YZU1 Mrps10-202ENSMUST00000119841 1113 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Shank1D3YZU1 Gm13185-201ENSMUST00000131044 944 ntTSL 3 BASIC12.85□□□□□ -0.35
Shank1D3YZU1 Gm15755-201ENSMUST00000133698 659 ntTSL 3 BASIC12.85□□□□□ -0.35
Shank1D3YZU1 B230217C12Rik-204ENSMUST00000170806 1118 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Shank1D3YZU1 Naxd-205ENSMUST00000178721 1108 ntTSL 5 BASIC12.85□□□□□ -0.35
Shank1D3YZU1 Mir124-2hg-206ENSMUST00000189754 525 ntTSL 3 BASIC12.85□□□□□ -0.35
Shank1D3YZU1 Gm8463-201ENSMUST00000208573 613 ntBASIC12.85□□□□□ -0.35
Shank1D3YZU1 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Shank1D3YZU1 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Shank1D3YZU1 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Shank1D3YZU1 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Shank1D3YZU1 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC12.85□□□□□ -0.35
Shank1D3YZU1 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Shank1D3YZU1 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Shank1D3YZU1 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Shank1D3YZU1 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Shank1D3YZU1 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Shank1D3YZU1 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Shank1D3YZU1 Scyl3-201ENSMUST00000027876 4368 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Shank1D3YZU1 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Shank1D3YZU1 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Shank1D3YZU1 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Shank1D3YZU1 Rgs6-204ENSMUST00000185674 1362 ntTSL 5 BASIC12.84□□□□□ -0.35
Shank1D3YZU1 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Shank1D3YZU1 Trav13d-2-201ENSMUST00000103596 264 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
Shank1D3YZU1 Trav13n-2-201ENSMUST00000103622 264 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
Shank1D3YZU1 Aurkaip1-202ENSMUST00000105591 773 ntAPPRIS P1 TSL 3 BASIC12.84□□□□□ -0.35
Shank1D3YZU1 Myadml2os-201ENSMUST00000126642 1044 ntTSL 5 BASIC12.84□□□□□ -0.35
Shank1D3YZU1 Gm15945-201ENSMUST00000146755 810 ntTSL 3 BASIC12.84□□□□□ -0.35
Shank1D3YZU1 Fam219aos-201ENSMUST00000151164 708 ntTSL 2 BASIC12.84□□□□□ -0.35
Shank1D3YZU1 Gm6244-201ENSMUST00000178732 841 ntBASIC12.84□□□□□ -0.35
Shank1D3YZU1 Gm27731-201ENSMUST00000185192 107 ntBASIC12.84□□□□□ -0.35
Shank1D3YZU1 4930518P08Rik-201ENSMUST00000221281 1187 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Shank1D3YZU1 Ccdc33-202ENSMUST00000098681 1093 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Shank1D3YZU1 Rnf167-201ENSMUST00000037534 1833 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Shank1D3YZU1 As3mt-201ENSMUST00000003655 1751 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Shank1D3YZU1 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Shank1D3YZU1 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Shank1D3YZU1 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Shank1D3YZU1 Rhbdl3-201ENSMUST00000017836 3736 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Shank1D3YZU1 Pdlim2-210ENSMUST00000153735 1578 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Shank1D3YZU1 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Shank1D3YZU1 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Shank1D3YZU1 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Shank1D3YZU1 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Shank1D3YZU1 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Shank1D3YZU1 Krt20-201ENSMUST00000017743 1927 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Shank1D3YZU1 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Shank1D3YZU1 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Shank1D3YZU1 4933415J04Rik-201ENSMUST00000195895 1301 ntBASIC12.84□□□□□ -0.35
Shank1D3YZU1 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Shank1D3YZU1 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Shank1D3YZU1 3110009E18Rik-203ENSMUST00000112644 488 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Shank1D3YZU1 Gm15198-201ENSMUST00000117283 177 ntBASIC12.84□□□□□ -0.35
Shank1D3YZU1 Gm11899-201ENSMUST00000142373 745 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Shank1D3YZU1 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Shank1D3YZU1 Gm4219-201ENSMUST00000168140 2143 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Shank1D3YZU1 Vhl-ps1-201ENSMUST00000174813 597 ntBASIC12.84□□□□□ -0.35
Shank1D3YZU1 Tac2-202ENSMUST00000179960 852 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Shank1D3YZU1 Gm42693-201ENSMUST00000196779 631 ntBASIC12.84□□□□□ -0.35
Shank1D3YZU1 Tac2-201ENSMUST00000026466 678 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Shank1D3YZU1 Cfc1-201ENSMUST00000027298 1040 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Shank1D3YZU1 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Shank1D3YZU1 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Shank1D3YZU1 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Shank1D3YZU1 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Shank1D3YZU1 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Shank1D3YZU1 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC12.84□□□□□ -0.35
Shank1D3YZU1 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.35
Shank1D3YZU1 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Shank1D3YZU1 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC12.83□□□□□ -0.35
Shank1D3YZU1 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.35
Shank1D3YZU1 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Shank1D3YZU1 Spag8-202ENSMUST00000107870 1342 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Shank1D3YZU1 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC12.83□□□□□ -0.36
Shank1D3YZU1 2810429I04Rik-210ENSMUST00000189464 868 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Shank1D3YZU1 4930438A08Rik-202ENSMUST00000208022 918 ntTSL 5 BASIC12.83□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 51 ms