Protein–RNA interactions for Protein: B2RQC2

Usp42, Ubiquitin carboxyl-terminal hydrolase 42, mousemouse

Known RBP Predictions only

Length 1,324 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp42B2RQC2 Enpp1-203ENSMUST00000135846 2721 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Usp42B2RQC2 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Usp42B2RQC2 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Usp42B2RQC2 P2rx3-202ENSMUST00000111613 1764 ntAPPRIS ALT1 TSL 5 BASIC16.8■□□□□ 0.28
Usp42B2RQC2 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
Usp42B2RQC2 Actr1b-201ENSMUST00000043951 3248 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Usp42B2RQC2 AC167013.2-201ENSMUST00000228520 2684 ntBASIC16.8■□□□□ 0.28
Usp42B2RQC2 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC16.8■□□□□ 0.28
Usp42B2RQC2 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC16.79■□□□□ 0.28
Usp42B2RQC2 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Usp42B2RQC2 Il18r1-203ENSMUST00000167723 1919 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Usp42B2RQC2 Ube2d-ps-205ENSMUST00000142942 1840 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Usp42B2RQC2 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Usp42B2RQC2 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC16.79■□□□□ 0.28
Usp42B2RQC2 Gm8410-201ENSMUST00000117225 605 ntBASIC16.79■□□□□ 0.28
Usp42B2RQC2 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Usp42B2RQC2 Gm38294-201ENSMUST00000192831 381 ntBASIC16.79■□□□□ 0.28
Usp42B2RQC2 Obp2a-201ENSMUST00000077667 744 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Usp42B2RQC2 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC16.79■□□□□ 0.28
Usp42B2RQC2 Trmt10c-201ENSMUST00000059052 3002 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Usp42B2RQC2 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Usp42B2RQC2 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
Usp42B2RQC2 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC16.79■□□□□ 0.28
Usp42B2RQC2 Fbxo21-201ENSMUST00000035579 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Usp42B2RQC2 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC16.79■□□□□ 0.28
Usp42B2RQC2 9330182L06Rik-202ENSMUST00000115348 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Usp42B2RQC2 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Usp42B2RQC2 Gm38058-201ENSMUST00000194323 4368 ntBASIC16.79■□□□□ 0.28
Usp42B2RQC2 Arhgap10-201ENSMUST00000076316 3084 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Usp42B2RQC2 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Usp42B2RQC2 Gnpat-201ENSMUST00000034466 2984 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Usp42B2RQC2 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Usp42B2RQC2 Zdhhc19-201ENSMUST00000064192 1323 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Usp42B2RQC2 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC16.79■□□□□ 0.28
Usp42B2RQC2 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Usp42B2RQC2 AC121801.1-201ENSMUST00000225363 1899 ntBASIC16.78■□□□□ 0.28
Usp42B2RQC2 Pdlim3-201ENSMUST00000034053 1604 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Usp42B2RQC2 Gm15850-201ENSMUST00000134998 2049 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Usp42B2RQC2 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Usp42B2RQC2 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Usp42B2RQC2 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
Usp42B2RQC2 Crybb3-204ENSMUST00000119627 828 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
Usp42B2RQC2 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Usp42B2RQC2 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Usp42B2RQC2 Gm25144-201ENSMUST00000179561 110 ntBASIC16.78■□□□□ 0.28
Usp42B2RQC2 Gm25352-201ENSMUST00000179815 110 ntBASIC16.78■□□□□ 0.28
Usp42B2RQC2 Cnpy2-201ENSMUST00000026446 763 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
Usp42B2RQC2 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Usp42B2RQC2 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Usp42B2RQC2 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Usp42B2RQC2 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Usp42B2RQC2 Zfp318-204ENSMUST00000138127 3936 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
Usp42B2RQC2 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Usp42B2RQC2 Epsti1-201ENSMUST00000022591 1870 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Usp42B2RQC2 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Usp42B2RQC2 Ak1-201ENSMUST00000068271 2034 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Usp42B2RQC2 Mrpl58-209ENSMUST00000153983 2596 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Usp42B2RQC2 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Usp42B2RQC2 Etfdh-201ENSMUST00000029386 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Usp42B2RQC2 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
Usp42B2RQC2 Rph3al-203ENSMUST00000108420 695 ntTSL 3 BASIC16.77■□□□□ 0.28
Usp42B2RQC2 4930412M03Rik-201ENSMUST00000130746 1111 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Usp42B2RQC2 Gm15384-201ENSMUST00000138832 486 ntTSL 5 BASIC16.77■□□□□ 0.28
Usp42B2RQC2 Hist1h3h-201ENSMUST00000188775 411 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
Usp42B2RQC2 Hist1h3i-201ENSMUST00000189457 411 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
Usp42B2RQC2 Shd-206ENSMUST00000225145 998 ntBASIC16.77■□□□□ 0.28
Usp42B2RQC2 Lce1c-201ENSMUST00000047055 724 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Usp42B2RQC2 Ndufa8-201ENSMUST00000070112 861 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Usp42B2RQC2 Tom1-202ENSMUST00000165630 2267 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Usp42B2RQC2 Fahd1-201ENSMUST00000049642 1407 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
Usp42B2RQC2 Fam192a-201ENSMUST00000034226 2873 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Usp42B2RQC2 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Usp42B2RQC2 Myef2-206ENSMUST00000142718 2942 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
Usp42B2RQC2 Pdlim3-203ENSMUST00000210422 1479 ntAPPRIS ALT1 TSL 5 BASIC16.77■□□□□ 0.27
Usp42B2RQC2 AC115735.4-201ENSMUST00000227460 1944 ntBASIC16.77■□□□□ 0.27
Usp42B2RQC2 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Usp42B2RQC2 Syt10-201ENSMUST00000029441 1845 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Usp42B2RQC2 Ubl4b-201ENSMUST00000052853 1387 ntAPPRIS P1 BASIC16.77■□□□□ 0.27
Usp42B2RQC2 Lrp11-203ENSMUST00000130590 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
Usp42B2RQC2 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Usp42B2RQC2 Fam76a-201ENSMUST00000030696 3053 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Usp42B2RQC2 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
Usp42B2RQC2 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Usp42B2RQC2 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Usp42B2RQC2 A930033H14Rik-201ENSMUST00000170048 2969 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Usp42B2RQC2 Jaml-204ENSMUST00000215880 1704 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Usp42B2RQC2 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Usp42B2RQC2 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Usp42B2RQC2 Hes2-201ENSMUST00000030782 2521 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Usp42B2RQC2 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Usp42B2RQC2 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC16.76■□□□□ 0.27
Usp42B2RQC2 Nabp1-202ENSMUST00000185534 708 ntTSL 2 BASIC16.76■□□□□ 0.27
Usp42B2RQC2 Gm44608-201ENSMUST00000206827 855 ntBASIC16.76■□□□□ 0.27
Usp42B2RQC2 Traf1-201ENSMUST00000028234 2069 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
Usp42B2RQC2 Gm38102-201ENSMUST00000192791 1935 ntBASIC16.76■□□□□ 0.27
Usp42B2RQC2 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Usp42B2RQC2 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Usp42B2RQC2 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
Usp42B2RQC2 Egfem1-201ENSMUST00000118531 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Usp42B2RQC2 Prrxl1-203ENSMUST00000187377 1629 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 66.3 ms