Protein–RNA interactions for Protein: A0A140LIT1

Ccdc194, Coiled-coil domain-containing protein 194, mousemouse

Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc194A0A140LIT1 Mtrr-209ENSMUST00000223398 3861 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ccdc194A0A140LIT1 Elovl1-201ENSMUST00000006557 1811 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ccdc194A0A140LIT1 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ccdc194A0A140LIT1 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ccdc194A0A140LIT1 Ccnf-201ENSMUST00000115390 3099 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ccdc194A0A140LIT1 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ccdc194A0A140LIT1 Pds5b-201ENSMUST00000016569 7417 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ccdc194A0A140LIT1 Klhl32-204ENSMUST00000108218 7143 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Ccdc194A0A140LIT1 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ccdc194A0A140LIT1 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Ccdc194A0A140LIT1 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ccdc194A0A140LIT1 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC14.32□□□□□ -0.12
Ccdc194A0A140LIT1 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Ccdc194A0A140LIT1 Gm14140-201ENSMUST00000119999 995 ntBASIC14.32□□□□□ -0.12
Ccdc194A0A140LIT1 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ccdc194A0A140LIT1 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC14.32□□□□□ -0.12
Ccdc194A0A140LIT1 Gm27301-201ENSMUST00000184012 127 ntBASIC14.32□□□□□ -0.12
Ccdc194A0A140LIT1 CR974585.1-201ENSMUST00000221790 1263 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Ccdc194A0A140LIT1 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Ccdc194A0A140LIT1 Tbrg4-201ENSMUST00000000394 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ccdc194A0A140LIT1 Cacna2d1-202ENSMUST00000078272 7311 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Ccdc194A0A140LIT1 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ccdc194A0A140LIT1 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ccdc194A0A140LIT1 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ccdc194A0A140LIT1 Gins2-201ENSMUST00000034278 3900 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ccdc194A0A140LIT1 Nrxn1-207ENSMUST00000160844 9309 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ccdc194A0A140LIT1 Tars2-204ENSMUST00000163530 2157 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ccdc194A0A140LIT1 Lzts1-201ENSMUST00000037049 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ccdc194A0A140LIT1 Pik3cd-214ENSMUST00000177654 4765 ntAPPRIS P4 TSL 5 BASIC14.31□□□□□ -0.12
Ccdc194A0A140LIT1 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ccdc194A0A140LIT1 Nav1-207ENSMUST00000190298 8557 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ccdc194A0A140LIT1 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ccdc194A0A140LIT1 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ccdc194A0A140LIT1 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ccdc194A0A140LIT1 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC14.31□□□□□ -0.12
Ccdc194A0A140LIT1 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Ccdc194A0A140LIT1 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ccdc194A0A140LIT1 Scyl3-201ENSMUST00000027876 4368 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ccdc194A0A140LIT1 Yipf6-201ENSMUST00000054697 5211 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ccdc194A0A140LIT1 Gm9252-201ENSMUST00000172364 1602 ntBASIC14.31□□□□□ -0.12
Ccdc194A0A140LIT1 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Ccdc194A0A140LIT1 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ccdc194A0A140LIT1 Elk3-201ENSMUST00000008542 4212 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ccdc194A0A140LIT1 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Ccdc194A0A140LIT1 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC14.31□□□□□ -0.12
Ccdc194A0A140LIT1 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Ccdc194A0A140LIT1 Gm45098-201ENSMUST00000207179 657 ntBASIC14.31□□□□□ -0.12
Ccdc194A0A140LIT1 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
Ccdc194A0A140LIT1 Mzt1-203ENSMUST00000227948 952 ntBASIC14.31□□□□□ -0.12
Ccdc194A0A140LIT1 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ccdc194A0A140LIT1 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Ccdc194A0A140LIT1 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ccdc194A0A140LIT1 Slc25a46-201ENSMUST00000060396 4371 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ccdc194A0A140LIT1 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ccdc194A0A140LIT1 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ccdc194A0A140LIT1 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ccdc194A0A140LIT1 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ccdc194A0A140LIT1 Apbb1-215ENSMUST00000190369 1882 ntTSL 5 BASIC14.31□□□□□ -0.12
Ccdc194A0A140LIT1 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Ccdc194A0A140LIT1 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ccdc194A0A140LIT1 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Ccdc194A0A140LIT1 Fmn2-201ENSMUST00000030039 6442 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ccdc194A0A140LIT1 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ccdc194A0A140LIT1 Gm15850-201ENSMUST00000134998 2049 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Ccdc194A0A140LIT1 Mlkl-201ENSMUST00000056157 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ccdc194A0A140LIT1 Ctu2-201ENSMUST00000116412 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ccdc194A0A140LIT1 Olfr322-204ENSMUST00000214392 4779 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Ccdc194A0A140LIT1 Pxn-213ENSMUST00000202564 2126 ntTSL 5 BASIC14.3□□□□□ -0.12
Ccdc194A0A140LIT1 Zfp664-201ENSMUST00000111417 4092 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ccdc194A0A140LIT1 Fnbp4-201ENSMUST00000013759 4691 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ccdc194A0A140LIT1 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ccdc194A0A140LIT1 Ccnh-202ENSMUST00000163600 1055 ntTSL 5 BASIC14.3□□□□□ -0.12
Ccdc194A0A140LIT1 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC14.3□□□□□ -0.12
Ccdc194A0A140LIT1 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Ccdc194A0A140LIT1 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ccdc194A0A140LIT1 Pde8a-201ENSMUST00000026672 3802 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ccdc194A0A140LIT1 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ccdc194A0A140LIT1 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ccdc194A0A140LIT1 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ccdc194A0A140LIT1 Atp4b-201ENSMUST00000033826 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ccdc194A0A140LIT1 Pde12-201ENSMUST00000052932 7725 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ccdc194A0A140LIT1 Socs5-201ENSMUST00000041369 4392 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ccdc194A0A140LIT1 Cyp20a1-201ENSMUST00000060608 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ccdc194A0A140LIT1 Asxl1-201ENSMUST00000109790 6968 ntAPPRIS P2 TSL 5 BASIC14.3□□□□□ -0.12
Ccdc194A0A140LIT1 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ccdc194A0A140LIT1 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Ccdc194A0A140LIT1 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ccdc194A0A140LIT1 Syt12-201ENSMUST00000059295 3581 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ccdc194A0A140LIT1 Gpr137-205ENSMUST00000166115 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ccdc194A0A140LIT1 Slc39a3-202ENSMUST00000117276 3796 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ccdc194A0A140LIT1 Rbm33-201ENSMUST00000030920 3955 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Ccdc194A0A140LIT1 Kif3c-205ENSMUST00000220210 4144 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ccdc194A0A140LIT1 Mlxip-201ENSMUST00000068237 7303 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ccdc194A0A140LIT1 C230004F18Rik-203ENSMUST00000137153 2138 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Ccdc194A0A140LIT1 Tuft1-203ENSMUST00000196655 2156 ntTSL 5 BASIC14.29□□□□□ -0.12
Ccdc194A0A140LIT1 Riox2-201ENSMUST00000023407 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ccdc194A0A140LIT1 Arid5a-201ENSMUST00000097778 2270 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ccdc194A0A140LIT1 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ccdc194A0A140LIT1 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ccdc194A0A140LIT1 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC14.29□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 29.1 ms