Protein–RNA interactions for Protein: A0A075B641

Trav8-1, T cell receptor alpha variable 8-1 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8-1A0A075B641 Ltbp4-204ENSMUST00000118961 3444 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Trav8-1A0A075B641 Clcn3-201ENSMUST00000004430 4175 ntAPPRIS ALT1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Trav8-1A0A075B641 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Trav8-1A0A075B641 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Trav8-1A0A075B641 Vcpip1-201ENSMUST00000057438 9749 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Trav8-1A0A075B641 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Trav8-1A0A075B641 Pi4kb-201ENSMUST00000072287 3692 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Trav8-1A0A075B641 Nhlh2-203ENSMUST00000198675 3943 ntAPPRIS P1 TSL 2 BASIC10.3□□□□□ -0.76
Trav8-1A0A075B641 Zfp672-204ENSMUST00000108829 3094 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Trav8-1A0A075B641 Dpysl4-202ENSMUST00000121184 2727 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Trav8-1A0A075B641 Myh2-203ENSMUST00000170159 6083 ntAPPRIS P1 TSL 5 BASIC10.3□□□□□ -0.76
Trav8-1A0A075B641 Prkx-202ENSMUST00000114044 2639 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Trav8-1A0A075B641 Mettl13-201ENSMUST00000028017 4541 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Trav8-1A0A075B641 Adck5-214ENSMUST00000162503 2040 ntAPPRIS P1 TSL 5 BASIC10.3□□□□□ -0.76
Trav8-1A0A075B641 Zbtb7b-203ENSMUST00000107433 3650 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Trav8-1A0A075B641 Ttbk2-203ENSMUST00000085840 11152 ntAPPRIS P1 TSL 5 BASIC10.3□□□□□ -0.76
Trav8-1A0A075B641 Mest-202ENSMUST00000124665 2665 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Trav8-1A0A075B641 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Trav8-1A0A075B641 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC10.3□□□□□ -0.76
Trav8-1A0A075B641 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC10.3□□□□□ -0.76
Trav8-1A0A075B641 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC10.3□□□□□ -0.76
Trav8-1A0A075B641 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Trav8-1A0A075B641 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC10.3□□□□□ -0.76
Trav8-1A0A075B641 Gm22697-201ENSMUST00000175194 63 ntBASIC10.3□□□□□ -0.76
Trav8-1A0A075B641 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Trav8-1A0A075B641 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Trav8-1A0A075B641 Ncdn-202ENSMUST00000106116 2434 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Trav8-1A0A075B641 Popdc2-201ENSMUST00000023494 2169 ntAPPRIS P4 TSL 1 (best) BASIC10.3□□□□□ -0.76
Trav8-1A0A075B641 Corin-201ENSMUST00000005352 4862 ntAPPRIS P3 TSL 1 (best) BASIC10.3□□□□□ -0.76
Trav8-1A0A075B641 Tbc1d22a-201ENSMUST00000063414 3229 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Trav8-1A0A075B641 Sp6-202ENSMUST00000107622 3621 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Trav8-1A0A075B641 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Trav8-1A0A075B641 Ccdc185-201ENSMUST00000060041 2055 ntAPPRIS P1 BASIC10.3□□□□□ -0.76
Trav8-1A0A075B641 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Trav8-1A0A075B641 Acin1-221ENSMUST00000150371 2494 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Trav8-1A0A075B641 Arf2-201ENSMUST00000057921 2242 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Trav8-1A0A075B641 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Trav8-1A0A075B641 Sema4a-214ENSMUST00000166237 3046 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Trav8-1A0A075B641 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Trav8-1A0A075B641 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Trav8-1A0A075B641 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC10.3□□□□□ -0.76
Trav8-1A0A075B641 Pcdhgb1-201ENSMUST00000192931 4723 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Trav8-1A0A075B641 Plk4-203ENSMUST00000203295 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC10.29□□□□□ -0.76
Trav8-1A0A075B641 Il17rd-203ENSMUST00000225146 3366 ntBASIC10.29□□□□□ -0.76
Trav8-1A0A075B641 Pcdhga9-201ENSMUST00000091935 4724 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Trav8-1A0A075B641 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Trav8-1A0A075B641 Pnoc-201ENSMUST00000059339 2157 ntAPPRIS P2 TSL 1 (best) BASIC10.29□□□□□ -0.76
Trav8-1A0A075B641 Jph2-201ENSMUST00000017961 4211 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Trav8-1A0A075B641 Esr2-201ENSMUST00000076634 3288 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Trav8-1A0A075B641 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Trav8-1A0A075B641 Armcx1-201ENSMUST00000035748 2303 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Trav8-1A0A075B641 Rbm20-204ENSMUST00000164202 6592 ntAPPRIS P1 TSL 5 BASIC10.29□□□□□ -0.76
Trav8-1A0A075B641 Ebf1-202ENSMUST00000101326 3422 ntAPPRIS ALT1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Trav8-1A0A075B641 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC10.29□□□□□ -0.76
Trav8-1A0A075B641 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC10.29□□□□□ -0.76
Trav8-1A0A075B641 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC10.29□□□□□ -0.76
Trav8-1A0A075B641 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Trav8-1A0A075B641 C5ar1-201ENSMUST00000050770 2481 ntAPPRIS P1 TSL 3 BASIC10.29□□□□□ -0.76
Trav8-1A0A075B641 Srrm1-202ENSMUST00000084846 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC10.29□□□□□ -0.76
Trav8-1A0A075B641 Ncoa7-201ENSMUST00000068567 5105 ntAPPRIS P3 TSL 5 BASIC10.29□□□□□ -0.76
Trav8-1A0A075B641 Slc8b1-204ENSMUST00000111890 2775 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Trav8-1A0A075B641 Ggnbp1-203ENSMUST00000133257 5012 ntAPPRIS P3 TSL 1 (best) BASIC10.29□□□□□ -0.76
Trav8-1A0A075B641 Rcsd1-202ENSMUST00000097474 5001 ntAPPRIS ALT2 TSL 1 (best) BASIC10.29□□□□□ -0.76
Trav8-1A0A075B641 Chrna10-201ENSMUST00000084830 2513 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Trav8-1A0A075B641 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC10.29□□□□□ -0.76
Trav8-1A0A075B641 Cluh-201ENSMUST00000092915 5379 ntAPPRIS P2 TSL 1 (best) BASIC10.29□□□□□ -0.76
Trav8-1A0A075B641 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC10.29□□□□□ -0.76
Trav8-1A0A075B641 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Trav8-1A0A075B641 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Trav8-1A0A075B641 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Trav8-1A0A075B641 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC10.29□□□□□ -0.76
Trav8-1A0A075B641 Cald1-201ENSMUST00000031775 2142 ntAPPRIS ALT2 TSL 5 BASIC10.29□□□□□ -0.76
Trav8-1A0A075B641 Gm9987-201ENSMUST00000069768 567 ntBASIC10.29□□□□□ -0.76
Trav8-1A0A075B641 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Trav8-1A0A075B641 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Trav8-1A0A075B641 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC10.29□□□□□ -0.76
Trav8-1A0A075B641 Fam222b-201ENSMUST00000073705 3258 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Trav8-1A0A075B641 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Trav8-1A0A075B641 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Trav8-1A0A075B641 Rapgef2-201ENSMUST00000118100 6573 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Trav8-1A0A075B641 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Trav8-1A0A075B641 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC10.29□□□□□ -0.76
Trav8-1A0A075B641 Zscan20-202ENSMUST00000097877 5364 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Trav8-1A0A075B641 Kctd14-206ENSMUST00000206658 2339 ntAPPRIS P3 TSL 3 BASIC10.29□□□□□ -0.76
Trav8-1A0A075B641 Stox2-209ENSMUST00000211882 9696 ntTSL 5 BASIC10.29□□□□□ -0.76
Trav8-1A0A075B641 Polrmt-202ENSMUST00000159016 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC10.29□□□□□ -0.76
Trav8-1A0A075B641 Bcl2l2-201ENSMUST00000022806 3509 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Trav8-1A0A075B641 Bahcc1-202ENSMUST00000118987 10712 ntAPPRIS ALT2 TSL 1 (best) BASIC10.29□□□□□ -0.76
Trav8-1A0A075B641 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Trav8-1A0A075B641 Rsbn1l-202ENSMUST00000196780 7651 ntAPPRIS ALT2 TSL 1 (best) BASIC10.29□□□□□ -0.76
Trav8-1A0A075B641 Myo10-202ENSMUST00000110457 8125 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Trav8-1A0A075B641 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Trav8-1A0A075B641 Gm43677-201ENSMUST00000198098 2378 ntBASIC10.29□□□□□ -0.76
Trav8-1A0A075B641 Ankrd34b-201ENSMUST00000061594 4013 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Trav8-1A0A075B641 AI464131-201ENSMUST00000054920 4173 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Trav8-1A0A075B641 Usp19-203ENSMUST00000166103 4473 ntAPPRIS ALT2 TSL 1 (best) BASIC10.29□□□□□ -0.76
Trav8-1A0A075B641 Gm26777-201ENSMUST00000181852 2573 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Trav8-1A0A075B641 Micu1-204ENSMUST00000165563 2442 ntAPPRIS P3 TSL 1 (best) BASIC10.28□□□□□ -0.76
Trav8-1A0A075B641 Osm-201ENSMUST00000075221 2272 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Trav8-1A0A075B641 Erg-203ENSMUST00000113848 2139 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Retrieved 100 of 76,532 protein–RNA pairs in 39.4 ms