Protein–RNA interactions for Protein: Q9Z140

Cpne6, Copine-6, mousemouse

Predictions only

Length 557 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpne6Q9Z140 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Cpne6Q9Z140 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Cpne6Q9Z140 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Cpne6Q9Z140 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
Cpne6Q9Z140 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC14.02□□□□□ -0.17
Cpne6Q9Z140 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Cpne6Q9Z140 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC14.02□□□□□ -0.17
Cpne6Q9Z140 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Cpne6Q9Z140 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Cpne6Q9Z140 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC14.02□□□□□ -0.17
Cpne6Q9Z140 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Cpne6Q9Z140 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
Cpne6Q9Z140 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cpne6Q9Z140 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cpne6Q9Z140 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cpne6Q9Z140 Prkcz-201ENSMUST00000030922 2641 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cpne6Q9Z140 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Cpne6Q9Z140 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC14.01□□□□□ -0.17
Cpne6Q9Z140 Chp2-201ENSMUST00000033152 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cpne6Q9Z140 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cpne6Q9Z140 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Cpne6Q9Z140 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Cpne6Q9Z140 Elovl1-207ENSMUST00000167636 1340 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cpne6Q9Z140 Lcn5-202ENSMUST00000100312 660 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cpne6Q9Z140 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Cpne6Q9Z140 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC14.01□□□□□ -0.17
Cpne6Q9Z140 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cpne6Q9Z140 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Cpne6Q9Z140 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Cpne6Q9Z140 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Cpne6Q9Z140 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cpne6Q9Z140 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cpne6Q9Z140 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Cpne6Q9Z140 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cpne6Q9Z140 Gm6756-201ENSMUST00000180647 1620 ntBASIC14.01□□□□□ -0.17
Cpne6Q9Z140 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC14□□□□□ -0.17
Cpne6Q9Z140 Spryd4-201ENSMUST00000061995 1583 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Cpne6Q9Z140 Erich6-201ENSMUST00000041115 2195 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Cpne6Q9Z140 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Cpne6Q9Z140 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC14□□□□□ -0.17
Cpne6Q9Z140 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC14□□□□□ -0.17
Cpne6Q9Z140 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC14□□□□□ -0.17
Cpne6Q9Z140 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Cpne6Q9Z140 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Cpne6Q9Z140 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC14□□□□□ -0.17
Cpne6Q9Z140 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Cpne6Q9Z140 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC14□□□□□ -0.17
Cpne6Q9Z140 Gm13823-201ENSMUST00000119930 345 ntBASIC14□□□□□ -0.17
Cpne6Q9Z140 Ociad1-210ENSMUST00000202250 800 ntTSL 2 BASIC14□□□□□ -0.17
Cpne6Q9Z140 Cfd-201ENSMUST00000061653 922 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Cpne6Q9Z140 Il9r-202ENSMUST00000128311 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Cpne6Q9Z140 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Cpne6Q9Z140 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Cpne6Q9Z140 Midn-201ENSMUST00000042057 3727 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Cpne6Q9Z140 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Cpne6Q9Z140 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Cpne6Q9Z140 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC14□□□□□ -0.17
Cpne6Q9Z140 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Cpne6Q9Z140 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Cpne6Q9Z140 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Cpne6Q9Z140 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Cpne6Q9Z140 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
Cpne6Q9Z140 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Cpne6Q9Z140 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
Cpne6Q9Z140 Nap1l1-208ENSMUST00000219961 1512 ntTSL 1 (best) BASIC14□□□□□ -0.17
Cpne6Q9Z140 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC13.99□□□□□ -0.17
Cpne6Q9Z140 Otop2-201ENSMUST00000055490 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cpne6Q9Z140 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Cpne6Q9Z140 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cpne6Q9Z140 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC13.99□□□□□ -0.17
Cpne6Q9Z140 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC13.99□□□□□ -0.17
Cpne6Q9Z140 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cpne6Q9Z140 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Cpne6Q9Z140 Serhl-201ENSMUST00000078218 1371 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cpne6Q9Z140 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Cpne6Q9Z140 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cpne6Q9Z140 Arl11-202ENSMUST00000224727 2095 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
Cpne6Q9Z140 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Cpne6Q9Z140 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
Cpne6Q9Z140 Ccl25-205ENSMUST00000127460 867 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Cpne6Q9Z140 Igfbp4-204ENSMUST00000140772 742 ntTSL 2 BASIC13.99□□□□□ -0.17
Cpne6Q9Z140 Gm23547-201ENSMUST00000158210 271 ntBASIC13.99□□□□□ -0.17
Cpne6Q9Z140 Ppt2-202ENSMUST00000166040 1139 ntAPPRIS P1 TSL 3 BASIC13.99□□□□□ -0.17
Cpne6Q9Z140 Gm37596-201ENSMUST00000193565 1021 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
Cpne6Q9Z140 5430431A17Rik-201ENSMUST00000206342 795 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Cpne6Q9Z140 Ino80e-214ENSMUST00000206349 883 ntTSL 2 BASIC13.99□□□□□ -0.17
Cpne6Q9Z140 AI463170-203ENSMUST00000219353 430 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Cpne6Q9Z140 Il31-201ENSMUST00000031389 806 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cpne6Q9Z140 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
Cpne6Q9Z140 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cpne6Q9Z140 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC13.99□□□□□ -0.17
Cpne6Q9Z140 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cpne6Q9Z140 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Cpne6Q9Z140 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cpne6Q9Z140 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cpne6Q9Z140 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cpne6Q9Z140 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cpne6Q9Z140 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cpne6Q9Z140 Nupl1-207ENSMUST00000225311 2475 ntBASIC13.99□□□□□ -0.17
Cpne6Q9Z140 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 111.6 ms