Protein–RNA interactions for Protein: Q9R061

Nubp2, Cytosolic Fe-S cluster assembly factor NUBP2, mousemouse

Predictions only

Length 275 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nubp2Q9R061 Gm16198-201ENSMUST00000118766 670 ntBASIC12.8□□□□□ -0.36
Nubp2Q9R061 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC12.8□□□□□ -0.36
Nubp2Q9R061 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC12.8□□□□□ -0.36
Nubp2Q9R061 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC12.8□□□□□ -0.36
Nubp2Q9R061 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC12.8□□□□□ -0.36
Nubp2Q9R061 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC12.8□□□□□ -0.36
Nubp2Q9R061 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Nubp2Q9R061 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC12.8□□□□□ -0.36
Nubp2Q9R061 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Nubp2Q9R061 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Nubp2Q9R061 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Nubp2Q9R061 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Nubp2Q9R061 C1qtnf2-201ENSMUST00000057679 1211 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Nubp2Q9R061 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC12.8□□□□□ -0.36
Nubp2Q9R061 Gm10154-201ENSMUST00000084445 354 ntBASIC12.8□□□□□ -0.36
Nubp2Q9R061 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC12.8□□□□□ -0.36
Nubp2Q9R061 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC12.8□□□□□ -0.36
Nubp2Q9R061 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Nubp2Q9R061 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Nubp2Q9R061 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Nubp2Q9R061 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Nubp2Q9R061 Sh3bp5-201ENSMUST00000091903 2684 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Nubp2Q9R061 Nub1-201ENSMUST00000068825 3269 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Nubp2Q9R061 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Nubp2Q9R061 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Nubp2Q9R061 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Nubp2Q9R061 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC12.8□□□□□ -0.36
Nubp2Q9R061 Ccdc157-201ENSMUST00000093381 5015 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Nubp2Q9R061 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Nubp2Q9R061 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Nubp2Q9R061 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Nubp2Q9R061 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Nubp2Q9R061 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Nubp2Q9R061 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Nubp2Q9R061 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC12.79□□□□□ -0.36
Nubp2Q9R061 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Nubp2Q9R061 Gm9947-201ENSMUST00000067599 2920 ntBASIC12.79□□□□□ -0.36
Nubp2Q9R061 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Nubp2Q9R061 Syt1-201ENSMUST00000064054 4745 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Nubp2Q9R061 Grin2a-202ENSMUST00000115835 5023 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Nubp2Q9R061 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC12.79□□□□□ -0.36
Nubp2Q9R061 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Nubp2Q9R061 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Nubp2Q9R061 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Nubp2Q9R061 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Nubp2Q9R061 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Nubp2Q9R061 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Nubp2Q9R061 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Nubp2Q9R061 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Nubp2Q9R061 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Nubp2Q9R061 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC12.79□□□□□ -0.36
Nubp2Q9R061 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Nubp2Q9R061 Gm25925-201ENSMUST00000158314 306 ntBASIC12.79□□□□□ -0.36
Nubp2Q9R061 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC12.79□□□□□ -0.36
Nubp2Q9R061 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Nubp2Q9R061 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC12.79□□□□□ -0.36
Nubp2Q9R061 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC12.79□□□□□ -0.36
Nubp2Q9R061 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC12.79□□□□□ -0.36
Nubp2Q9R061 AC155252.2-201ENSMUST00000226946 680 ntBASIC12.79□□□□□ -0.36
Nubp2Q9R061 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Nubp2Q9R061 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Nubp2Q9R061 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Nubp2Q9R061 Dnm1-205ENSMUST00000113365 3257 ntAPPRIS ALT1 TSL 5 BASIC12.79□□□□□ -0.36
Nubp2Q9R061 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Nubp2Q9R061 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
Nubp2Q9R061 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Nubp2Q9R061 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Nubp2Q9R061 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Nubp2Q9R061 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
Nubp2Q9R061 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Nubp2Q9R061 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Nubp2Q9R061 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Nubp2Q9R061 Zyg11b-201ENSMUST00000043616 8691 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Nubp2Q9R061 Tet3-203ENSMUST00000186548 5944 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Nubp2Q9R061 Axdnd1-204ENSMUST00000178036 3586 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Nubp2Q9R061 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Nubp2Q9R061 Pard3-222ENSMUST00000162536 5175 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Nubp2Q9R061 Nupl1-207ENSMUST00000225311 2475 ntBASIC12.78□□□□□ -0.36
Nubp2Q9R061 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC12.78□□□□□ -0.36
Nubp2Q9R061 Gm44645-201ENSMUST00000205492 1653 ntBASIC12.78□□□□□ -0.36
Nubp2Q9R061 Pank4-201ENSMUST00000030931 2508 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Nubp2Q9R061 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Nubp2Q9R061 Cep250-203ENSMUST00000109618 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Nubp2Q9R061 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Nubp2Q9R061 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC12.78□□□□□ -0.36
Nubp2Q9R061 CT010506.4-201ENSMUST00000225457 351 ntBASIC12.78□□□□□ -0.36
Nubp2Q9R061 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Nubp2Q9R061 Gpr146-202ENSMUST00000053120 1040 ntBASIC12.78□□□□□ -0.36
Nubp2Q9R061 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC12.78□□□□□ -0.36
Nubp2Q9R061 Rasa4-202ENSMUST00000100570 2660 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Nubp2Q9R061 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Nubp2Q9R061 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Nubp2Q9R061 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Nubp2Q9R061 Zfyve27-207ENSMUST00000169536 5611 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Nubp2Q9R061 Zfp740-201ENSMUST00000118729 4241 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Nubp2Q9R061 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC12.78□□□□□ -0.36
Nubp2Q9R061 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Nubp2Q9R061 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Nubp2Q9R061 Dolpp1-202ENSMUST00000113612 1958 ntTSL 3 BASIC12.78□□□□□ -0.36
Nubp2Q9R061 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 24.5 ms