Protein–RNA interactions for Protein: Q9ES00

Ube4b, Ubiquitin conjugation factor E4 B, mousemouse

Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube4bQ9ES00 A430093F15Rik-204ENSMUST00000186596 2115 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Ube4bQ9ES00 Spata21-201ENSMUST00000051907 2526 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ube4bQ9ES00 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ube4bQ9ES00 Mmp2-201ENSMUST00000034187 3078 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ube4bQ9ES00 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC13.84□□□□□ -0.19
Ube4bQ9ES00 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
Ube4bQ9ES00 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC13.84□□□□□ -0.19
Ube4bQ9ES00 Gm18041-201ENSMUST00000218210 618 ntBASIC13.84□□□□□ -0.19
Ube4bQ9ES00 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ube4bQ9ES00 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ube4bQ9ES00 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ube4bQ9ES00 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Ube4bQ9ES00 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
Ube4bQ9ES00 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ube4bQ9ES00 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ube4bQ9ES00 Trim26-201ENSMUST00000053434 3198 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ube4bQ9ES00 Traf1-201ENSMUST00000028234 2069 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
Ube4bQ9ES00 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ube4bQ9ES00 Tmprss11d-202ENSMUST00000122377 2256 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Ube4bQ9ES00 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Ube4bQ9ES00 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ube4bQ9ES00 Rhot1-204ENSMUST00000092857 3687 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ube4bQ9ES00 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ube4bQ9ES00 Gm42748-201ENSMUST00000199354 2341 ntBASIC13.84□□□□□ -0.19
Ube4bQ9ES00 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Ube4bQ9ES00 Enpp1-203ENSMUST00000135846 2721 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ube4bQ9ES00 Ap2m1-201ENSMUST00000007216 2937 ntAPPRIS P3 TSL 5 BASIC13.84□□□□□ -0.19
Ube4bQ9ES00 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.19
Ube4bQ9ES00 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.19
Ube4bQ9ES00 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
Ube4bQ9ES00 Pfkfb3-203ENSMUST00000100411 2008 ntTSL 5 BASIC13.83□□□□□ -0.2
Ube4bQ9ES00 Sgsm1-201ENSMUST00000048112 5161 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Ube4bQ9ES00 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Ube4bQ9ES00 G3bp2-203ENSMUST00000167918 4232 ntAPPRIS ALT1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Ube4bQ9ES00 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC13.83□□□□□ -0.2
Ube4bQ9ES00 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
Ube4bQ9ES00 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Ube4bQ9ES00 Gm8349-201ENSMUST00000182720 1003 ntBASIC13.83□□□□□ -0.2
Ube4bQ9ES00 Gm33142-201ENSMUST00000193913 867 ntBASIC13.83□□□□□ -0.2
Ube4bQ9ES00 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Ube4bQ9ES00 AC127349.1-201ENSMUST00000224590 266 ntBASIC13.83□□□□□ -0.2
Ube4bQ9ES00 Cyp11a1-201ENSMUST00000034874 2120 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Ube4bQ9ES00 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Ube4bQ9ES00 Tle3-204ENSMUST00000159386 4527 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
Ube4bQ9ES00 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Ube4bQ9ES00 AC117194.1-201ENSMUST00000224847 3002 ntBASIC13.83□□□□□ -0.2
Ube4bQ9ES00 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Ube4bQ9ES00 Slc39a8-202ENSMUST00000081978 3314 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Ube4bQ9ES00 Plch2-210ENSMUST00000176194 5619 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
Ube4bQ9ES00 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Ube4bQ9ES00 Elovl1-201ENSMUST00000006557 1811 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Ube4bQ9ES00 Wdr54-205ENSMUST00000153148 4634 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Ube4bQ9ES00 Adamts7-208ENSMUST00000167122 5338 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
Ube4bQ9ES00 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ube4bQ9ES00 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Ube4bQ9ES00 Chfr-201ENSMUST00000014812 3146 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ube4bQ9ES00 Ccdc116-203ENSMUST00000115711 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ube4bQ9ES00 Trim80-201ENSMUST00000093914 1934 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ube4bQ9ES00 Grk4-201ENSMUST00000001112 2408 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ube4bQ9ES00 Spata5-209ENSMUST00000198968 2916 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ube4bQ9ES00 Gucy2e-201ENSMUST00000021259 8331 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Ube4bQ9ES00 Rasal3-201ENSMUST00000063824 3681 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ube4bQ9ES00 Ppt2-209ENSMUST00000171121 1710 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Ube4bQ9ES00 Coq4-201ENSMUST00000028137 1991 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ube4bQ9ES00 Ugt1a8-201ENSMUST00000113139 2227 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Ube4bQ9ES00 Bdp1-201ENSMUST00000038104 9921 ntAPPRIS P2 TSL 5 BASIC13.82□□□□□ -0.2
Ube4bQ9ES00 Ccdc155-201ENSMUST00000121017 2262 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ube4bQ9ES00 Rad9a-201ENSMUST00000025740 2046 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ube4bQ9ES00 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC13.82□□□□□ -0.2
Ube4bQ9ES00 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC13.82□□□□□ -0.2
Ube4bQ9ES00 Dhx30-201ENSMUST00000062368 3806 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Ube4bQ9ES00 Pik3cd-205ENSMUST00000118704 4894 ntAPPRIS ALT1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ube4bQ9ES00 Cxcr5-204ENSMUST00000215293 2846 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ube4bQ9ES00 Pde1c-209ENSMUST00000203372 3147 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Ube4bQ9ES00 Fmnl2-205ENSMUST00000155586 3939 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Ube4bQ9ES00 Trpm4-209ENSMUST00000211743 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ube4bQ9ES00 Mrpl3-201ENSMUST00000035177 3972 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ube4bQ9ES00 Dhx58-201ENSMUST00000017974 2412 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ube4bQ9ES00 Ralgps2-214ENSMUST00000191605 2958 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ube4bQ9ES00 Kmt5c-203ENSMUST00000108583 2177 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ube4bQ9ES00 Fam46a-201ENSMUST00000034802 5479 ntAPPRIS P3 TSL 3 BASIC13.82□□□□□ -0.2
Ube4bQ9ES00 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ube4bQ9ES00 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ube4bQ9ES00 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC13.82□□□□□ -0.2
Ube4bQ9ES00 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
Ube4bQ9ES00 Timp3-201ENSMUST00000020234 4722 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ube4bQ9ES00 Zbtb14-201ENSMUST00000062369 3625 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ube4bQ9ES00 Slfn2-201ENSMUST00000038038 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ube4bQ9ES00 Hif3a-202ENSMUST00000108492 6402 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ube4bQ9ES00 Gm26593-201ENSMUST00000181848 1970 ntTSL 5 BASIC13.82□□□□□ -0.2
Ube4bQ9ES00 Ppip5k2-202ENSMUST00000112845 6239 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Ube4bQ9ES00 Scfd2-203ENSMUST00000113542 2279 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Ube4bQ9ES00 Map6-201ENSMUST00000068973 3430 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ube4bQ9ES00 Kcna5-201ENSMUST00000060972 2862 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
Ube4bQ9ES00 Sfpq-201ENSMUST00000030623 3465 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ube4bQ9ES00 Scara5-201ENSMUST00000022610 3794 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ube4bQ9ES00 Rgs12-202ENSMUST00000087684 4713 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Ube4bQ9ES00 Apc2-202ENSMUST00000105359 9173 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Ube4bQ9ES00 Kbtbd6-202ENSMUST00000226192 2984 ntAPPRIS P2 BASIC13.81□□□□□ -0.2
Ube4bQ9ES00 Slc19a2-201ENSMUST00000044021 3571 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 40.5 ms