Protein–RNA interactions for Protein: Q9DC53

Cpne8, Copine-8, mousemouse

Predictions only

Length 577 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpne8Q9DC53 Tcp11l1-201ENSMUST00000028597 3512 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cpne8Q9DC53 Mrps9-201ENSMUST00000057208 1418 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cpne8Q9DC53 Tmem204-201ENSMUST00000024984 1846 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cpne8Q9DC53 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cpne8Q9DC53 Chtop-206ENSMUST00000107344 2972 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Cpne8Q9DC53 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
Cpne8Q9DC53 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cpne8Q9DC53 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cpne8Q9DC53 Asb18-201ENSMUST00000086882 3862 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cpne8Q9DC53 Gm15467-201ENSMUST00000120582 445 ntBASIC15.01□□□□□ -0.01
Cpne8Q9DC53 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Cpne8Q9DC53 Gm9182-201ENSMUST00000217829 639 ntBASIC15.01□□□□□ -0.01
Cpne8Q9DC53 AC102291.3-201ENSMUST00000226566 405 ntBASIC15.01□□□□□ -0.01
Cpne8Q9DC53 Ngef-201ENSMUST00000027477 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cpne8Q9DC53 Gm6756-201ENSMUST00000180647 1620 ntBASIC15.01□□□□□ -0.01
Cpne8Q9DC53 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
Cpne8Q9DC53 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cpne8Q9DC53 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cpne8Q9DC53 Fam57b-203ENSMUST00000205324 1915 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Cpne8Q9DC53 Chaf1a-201ENSMUST00000002914 3308 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cpne8Q9DC53 Adgrg5-205ENSMUST00000166802 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cpne8Q9DC53 Gm42471-201ENSMUST00000201457 1865 ntBASIC15.01□□□□□ -0.01
Cpne8Q9DC53 Phgdh-201ENSMUST00000065793 1893 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cpne8Q9DC53 Mtrr-209ENSMUST00000223398 3861 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cpne8Q9DC53 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cpne8Q9DC53 Brsk2-204ENSMUST00000105989 2149 ntAPPRIS P4 TSL 5 BASIC15.01□□□□□ -0.01
Cpne8Q9DC53 Pigg-201ENSMUST00000031189 3427 ntAPPRIS P3 TSL 5 BASIC15.01□□□□□ -0.01
Cpne8Q9DC53 Rhbdl3-201ENSMUST00000017836 3736 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cpne8Q9DC53 Sh3glb1-201ENSMUST00000163279 3961 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Cpne8Q9DC53 Ubqln2-201ENSMUST00000060714 3344 ntAPPRIS P1 BASIC15□□□□□ -0.01
Cpne8Q9DC53 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Cpne8Q9DC53 4930556H04Rik-201ENSMUST00000222451 1675 ntBASIC15□□□□□ -0.01
Cpne8Q9DC53 Gm3002-201ENSMUST00000170480 1955 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
Cpne8Q9DC53 Gm3005-202ENSMUST00000178728 1955 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
Cpne8Q9DC53 Kcna5-201ENSMUST00000060972 2862 ntAPPRIS P1 BASIC15□□□□□ -0.01
Cpne8Q9DC53 Spns1-201ENSMUST00000032994 2219 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Cpne8Q9DC53 Cdk19-202ENSMUST00000095743 3973 ntTSL 1 (best) BASIC15□□□□□ -0.01
Cpne8Q9DC53 Gm9918-201ENSMUST00000181801 2192 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Cpne8Q9DC53 Acot6-202ENSMUST00000222921 3622 ntBASIC15□□□□□ -0.01
Cpne8Q9DC53 Rbbp8-201ENSMUST00000047322 3618 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Cpne8Q9DC53 Dph3-205ENSMUST00000124303 809 ntTSL 2 BASIC15□□□□□ -0.01
Cpne8Q9DC53 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC15□□□□□ -0.01
Cpne8Q9DC53 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC15□□□□□ -0.01
Cpne8Q9DC53 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Cpne8Q9DC53 Gpr146-202ENSMUST00000053120 1040 ntBASIC15□□□□□ -0.01
Cpne8Q9DC53 Olfr370-201ENSMUST00000058609 1096 ntAPPRIS P1 BASIC15□□□□□ -0.01
Cpne8Q9DC53 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Cpne8Q9DC53 Atp6v1h-204ENSMUST00000192698 1811 ntTSL 5 BASIC15□□□□□ -0.01
Cpne8Q9DC53 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Cpne8Q9DC53 Ppt2-210ENSMUST00000171376 1750 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Cpne8Q9DC53 Itm2b-201ENSMUST00000022704 1796 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Cpne8Q9DC53 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Cpne8Q9DC53 Cdca5-201ENSMUST00000025704 2024 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Cpne8Q9DC53 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Cpne8Q9DC53 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Cpne8Q9DC53 4921504A21Rik-201ENSMUST00000180594 2156 ntTSL 1 (best) BASIC15□□□□□ -0.01
Cpne8Q9DC53 Ncdn-202ENSMUST00000106116 2434 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Cpne8Q9DC53 Epsti1-201ENSMUST00000022591 1870 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Cpne8Q9DC53 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
Cpne8Q9DC53 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC14.99□□□□□ -0.01
Cpne8Q9DC53 Ank3-223ENSMUST00000182557 1569 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Cpne8Q9DC53 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Cpne8Q9DC53 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Cpne8Q9DC53 Kcnj9-202ENSMUST00000194204 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Cpne8Q9DC53 Tmem164-202ENSMUST00000101198 4443 ntTSL 3 BASIC14.99□□□□□ -0.01
Cpne8Q9DC53 Syngr1-201ENSMUST00000009727 4180 ntAPPRIS P4 TSL 1 (best) BASIC14.99□□□□□ -0.01
Cpne8Q9DC53 Rad9a-201ENSMUST00000025740 2046 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Cpne8Q9DC53 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Cpne8Q9DC53 Gm11745-201ENSMUST00000121669 448 ntBASIC14.99□□□□□ -0.01
Cpne8Q9DC53 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Cpne8Q9DC53 Gm11025-201ENSMUST00000140773 466 ntBASIC14.99□□□□□ -0.01
Cpne8Q9DC53 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Cpne8Q9DC53 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC14.99□□□□□ -0.01
Cpne8Q9DC53 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
Cpne8Q9DC53 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Cpne8Q9DC53 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Cpne8Q9DC53 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
Cpne8Q9DC53 Ydjc-202ENSMUST00000115702 1713 ntTSL 5 BASIC14.99□□□□□ -0.01
Cpne8Q9DC53 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Cpne8Q9DC53 Eef1d-204ENSMUST00000089681 2152 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Cpne8Q9DC53 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Cpne8Q9DC53 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Cpne8Q9DC53 Psrc1-202ENSMUST00000102629 1687 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Cpne8Q9DC53 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC14.99□□□□□ -0.01
Cpne8Q9DC53 Ppp1r12b-209ENSMUST00000168381 3621 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Cpne8Q9DC53 Dmkn-205ENSMUST00000165887 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Cpne8Q9DC53 Men1-202ENSMUST00000078137 2738 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Cpne8Q9DC53 Ccne2-202ENSMUST00000108324 2908 ntAPPRIS P4 TSL 1 (best) BASIC14.99□□□□□ -0.01
Cpne8Q9DC53 Gm26513-201ENSMUST00000181802 2489 ntBASIC14.99□□□□□ -0.01
Cpne8Q9DC53 Rnpepl1-201ENSMUST00000027487 3337 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Cpne8Q9DC53 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
Cpne8Q9DC53 Capg-203ENSMUST00000114072 1388 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Cpne8Q9DC53 Slc4a1ap-201ENSMUST00000114533 2424 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
Cpne8Q9DC53 Gm11992-201ENSMUST00000043285 2400 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Cpne8Q9DC53 Pnpla2-203ENSMUST00000164016 2625 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Cpne8Q9DC53 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Cpne8Q9DC53 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Cpne8Q9DC53 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Cpne8Q9DC53 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
Cpne8Q9DC53 Gpt-201ENSMUST00000023203 1749 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 25.8 ms