Protein–RNA interactions for Protein: Q9D0N7

Chaf1b, Chromatin assembly factor 1 subunit B, mousemouse

Predictions only

Length 572 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chaf1bQ9D0N7 Gm13418-201ENSMUST00000119097 944 ntBASIC13.55□□□□□ -0.24
Chaf1bQ9D0N7 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC13.55□□□□□ -0.24
Chaf1bQ9D0N7 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC13.55□□□□□ -0.24
Chaf1bQ9D0N7 Gm33142-201ENSMUST00000193913 867 ntBASIC13.55□□□□□ -0.24
Chaf1bQ9D0N7 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Chaf1bQ9D0N7 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Chaf1bQ9D0N7 Atg16l1-201ENSMUST00000027512 3130 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
Chaf1bQ9D0N7 Strip2-201ENSMUST00000046028 5370 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Chaf1bQ9D0N7 2700080J24Rik-201ENSMUST00000205314 1662 ntBASIC13.55□□□□□ -0.24
Chaf1bQ9D0N7 Miat-205ENSMUST00000182953 9163 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Chaf1bQ9D0N7 2010300F17Rik-202ENSMUST00000181758 2493 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Chaf1bQ9D0N7 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Chaf1bQ9D0N7 Gm37019-201ENSMUST00000192133 2134 ntBASIC13.55□□□□□ -0.24
Chaf1bQ9D0N7 Camk2d-202ENSMUST00000066466 4075 ntAPPRIS ALT1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Chaf1bQ9D0N7 Prrt3-201ENSMUST00000101059 3304 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
Chaf1bQ9D0N7 Arhgef25-202ENSMUST00000167353 2189 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Chaf1bQ9D0N7 Apln-201ENSMUST00000039026 3149 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Chaf1bQ9D0N7 Slc39a3-201ENSMUST00000059551 3680 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Chaf1bQ9D0N7 Mllt6-201ENSMUST00000044730 7274 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Chaf1bQ9D0N7 Acadm-201ENSMUST00000072697 2047 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Chaf1bQ9D0N7 9930104L06Rik-201ENSMUST00000094769 2911 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Chaf1bQ9D0N7 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Chaf1bQ9D0N7 Ssr1-204ENSMUST00000225319 1610 ntBASIC13.54□□□□□ -0.24
Chaf1bQ9D0N7 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Chaf1bQ9D0N7 Hif3a-202ENSMUST00000108492 6402 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Chaf1bQ9D0N7 Slc38a10-204ENSMUST00000103018 4578 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Chaf1bQ9D0N7 Galnt4-201ENSMUST00000161240 5089 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
Chaf1bQ9D0N7 Angptl7-201ENSMUST00000030840 2157 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Chaf1bQ9D0N7 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Chaf1bQ9D0N7 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Chaf1bQ9D0N7 Lpcat1-201ENSMUST00000022099 3675 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Chaf1bQ9D0N7 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Chaf1bQ9D0N7 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC13.54□□□□□ -0.24
Chaf1bQ9D0N7 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Chaf1bQ9D0N7 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Chaf1bQ9D0N7 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Chaf1bQ9D0N7 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Chaf1bQ9D0N7 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC13.54□□□□□ -0.24
Chaf1bQ9D0N7 Slc45a1-201ENSMUST00000037827 3387 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Chaf1bQ9D0N7 Fbn1-201ENSMUST00000028633 9847 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Chaf1bQ9D0N7 Gm10110-201ENSMUST00000081204 1891 ntTSL 5 BASIC13.54□□□□□ -0.24
Chaf1bQ9D0N7 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Chaf1bQ9D0N7 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC13.54□□□□□ -0.24
Chaf1bQ9D0N7 Pcyox1-201ENSMUST00000032065 4295 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Chaf1bQ9D0N7 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC13.54□□□□□ -0.24
Chaf1bQ9D0N7 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Chaf1bQ9D0N7 Traf1-201ENSMUST00000028234 2069 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Chaf1bQ9D0N7 Ska1-201ENSMUST00000040188 2669 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Chaf1bQ9D0N7 Fgd4-211ENSMUST00000162671 2714 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Chaf1bQ9D0N7 Prrt3-202ENSMUST00000204134 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Chaf1bQ9D0N7 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Chaf1bQ9D0N7 Sgtb-201ENSMUST00000044385 3048 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Chaf1bQ9D0N7 Nfat5-201ENSMUST00000075922 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Chaf1bQ9D0N7 Nipa2-204ENSMUST00000119201 3925 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Chaf1bQ9D0N7 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Chaf1bQ9D0N7 Elk3-201ENSMUST00000008542 4212 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Chaf1bQ9D0N7 Pax6-201ENSMUST00000090391 2869 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Chaf1bQ9D0N7 Ppip5k2-202ENSMUST00000112845 6239 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Chaf1bQ9D0N7 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Chaf1bQ9D0N7 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Chaf1bQ9D0N7 Shisa3-201ENSMUST00000087241 3760 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Chaf1bQ9D0N7 Gm14859-201ENSMUST00000117752 357 ntBASIC13.53□□□□□ -0.24
Chaf1bQ9D0N7 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC13.53□□□□□ -0.24
Chaf1bQ9D0N7 Gm37153-201ENSMUST00000193637 231 ntBASIC13.53□□□□□ -0.24
Chaf1bQ9D0N7 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC13.53□□□□□ -0.24
Chaf1bQ9D0N7 Gm13830-205ENSMUST00000201195 1155 ntBASIC13.53□□□□□ -0.24
Chaf1bQ9D0N7 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Chaf1bQ9D0N7 Popdc2-201ENSMUST00000023494 2169 ntAPPRIS P4 TSL 1 (best) BASIC13.53□□□□□ -0.24
Chaf1bQ9D0N7 Dido1-207ENSMUST00000130986 4898 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Chaf1bQ9D0N7 Maged2-201ENSMUST00000026302 2207 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Chaf1bQ9D0N7 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Chaf1bQ9D0N7 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Chaf1bQ9D0N7 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC13.53□□□□□ -0.24
Chaf1bQ9D0N7 Socs5-201ENSMUST00000041369 4392 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Chaf1bQ9D0N7 Klhl12-201ENSMUST00000027725 3408 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Chaf1bQ9D0N7 Gm26513-201ENSMUST00000181802 2489 ntBASIC13.53□□□□□ -0.24
Chaf1bQ9D0N7 Gucd1-201ENSMUST00000039796 3500 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Chaf1bQ9D0N7 Igha-202ENSMUST00000194738 2540 ntAPPRIS P5 BASIC13.53□□□□□ -0.24
Chaf1bQ9D0N7 Gm14451-201ENSMUST00000121581 1542 ntBASIC13.53□□□□□ -0.24
Chaf1bQ9D0N7 Cobl-208ENSMUST00000172919 2566 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Chaf1bQ9D0N7 Scarf1-202ENSMUST00000118243 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Chaf1bQ9D0N7 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC13.53□□□□□ -0.24
Chaf1bQ9D0N7 Lin54-208ENSMUST00000149714 3869 ntTSL 5 BASIC13.53□□□□□ -0.24
Chaf1bQ9D0N7 Prkce-202ENSMUST00000097275 6254 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Chaf1bQ9D0N7 Dlk1-205ENSMUST00000109844 1703 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Chaf1bQ9D0N7 Mdga1-201ENSMUST00000073556 7566 ntAPPRIS P2 TSL 5 BASIC13.53□□□□□ -0.24
Chaf1bQ9D0N7 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Chaf1bQ9D0N7 Opa1-201ENSMUST00000038867 3230 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Chaf1bQ9D0N7 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Chaf1bQ9D0N7 Smc6-208ENSMUST00000218866 3373 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Chaf1bQ9D0N7 Tcf4-248ENSMUST00000202354 2120 ntTSL 5 BASIC13.52□□□□□ -0.24
Chaf1bQ9D0N7 Tcf4-257ENSMUST00000202772 2125 ntTSL 5 BASIC13.52□□□□□ -0.24
Chaf1bQ9D0N7 Tars2-204ENSMUST00000163530 2157 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Chaf1bQ9D0N7 Proser1-201ENSMUST00000058577 4472 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Chaf1bQ9D0N7 Il17re-202ENSMUST00000058548 2940 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Chaf1bQ9D0N7 Tmem163-205ENSMUST00000185560 3488 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Chaf1bQ9D0N7 Nbeal2-210ENSMUST00000167320 8803 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Chaf1bQ9D0N7 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
Chaf1bQ9D0N7 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Chaf1bQ9D0N7 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 37.8 ms