Protein–RNA interactions for Protein: Q9CY97

Ssu72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, mousemouse

Known RBP Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssu72Q9CY97 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ssu72Q9CY97 Fam155a-201ENSMUST00000110969 3388 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ssu72Q9CY97 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ssu72Q9CY97 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ssu72Q9CY97 Gm14859-201ENSMUST00000117752 357 ntBASIC14.29□□□□□ -0.12
Ssu72Q9CY97 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ssu72Q9CY97 Pbx2-205ENSMUST00000183827 1186 ntTSL 5 BASIC14.29□□□□□ -0.12
Ssu72Q9CY97 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC14.29□□□□□ -0.12
Ssu72Q9CY97 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC14.29□□□□□ -0.12
Ssu72Q9CY97 Gm45098-201ENSMUST00000207179 657 ntBASIC14.29□□□□□ -0.12
Ssu72Q9CY97 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ssu72Q9CY97 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ssu72Q9CY97 Ankrd34a-201ENSMUST00000058943 2583 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ssu72Q9CY97 Cnot7-201ENSMUST00000034012 2615 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ssu72Q9CY97 Kcnq2-207ENSMUST00000103050 2713 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Ssu72Q9CY97 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Ssu72Q9CY97 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
Ssu72Q9CY97 Fam83e-201ENSMUST00000129507 2908 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ssu72Q9CY97 Ttc7-201ENSMUST00000041110 4614 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ssu72Q9CY97 Mmp14-206ENSMUST00000225641 3238 ntBASIC14.29□□□□□ -0.12
Ssu72Q9CY97 Sirt3-210ENSMUST00000211179 1606 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Ssu72Q9CY97 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ssu72Q9CY97 Eno1b-201ENSMUST00000076155 1757 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ssu72Q9CY97 Ccdc121-201ENSMUST00000058825 1819 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Ssu72Q9CY97 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Ssu72Q9CY97 Atp13a2-201ENSMUST00000037055 3956 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ssu72Q9CY97 Cmip-201ENSMUST00000095172 2276 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Ssu72Q9CY97 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC14.29□□□□□ -0.12
Ssu72Q9CY97 Ylpm1-207ENSMUST00000168977 4893 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Ssu72Q9CY97 Gnb4-201ENSMUST00000108234 2510 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ssu72Q9CY97 Ggt7-201ENSMUST00000029131 2614 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ssu72Q9CY97 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Ssu72Q9CY97 Chtop-206ENSMUST00000107344 2972 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Ssu72Q9CY97 Cadps2-213ENSMUST00000166458 4598 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Ssu72Q9CY97 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Ssu72Q9CY97 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ssu72Q9CY97 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC14.28□□□□□ -0.12
Ssu72Q9CY97 Pef1-202ENSMUST00000118199 1915 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Ssu72Q9CY97 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ssu72Q9CY97 Il18r1-203ENSMUST00000167723 1919 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Ssu72Q9CY97 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Ssu72Q9CY97 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Ssu72Q9CY97 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC14.28□□□□□ -0.12
Ssu72Q9CY97 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC14.28□□□□□ -0.12
Ssu72Q9CY97 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC14.28□□□□□ -0.12
Ssu72Q9CY97 Kcnj8-202ENSMUST00000203945 2548 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ssu72Q9CY97 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC14.28□□□□□ -0.12
Ssu72Q9CY97 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Ssu72Q9CY97 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ssu72Q9CY97 Rbbp7-201ENSMUST00000033720 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ssu72Q9CY97 Pdlim3-201ENSMUST00000034053 1604 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ssu72Q9CY97 Rhoj-201ENSMUST00000055390 2350 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ssu72Q9CY97 B430305J03Rik-201ENSMUST00000066298 3702 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Ssu72Q9CY97 Dnm1-201ENSMUST00000078352 3246 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ssu72Q9CY97 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Ssu72Q9CY97 Trim52-201ENSMUST00000022708 3075 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Ssu72Q9CY97 Noct-203ENSMUST00000167780 2992 ntAPPRIS P2 TSL 5 BASIC14.28□□□□□ -0.12
Ssu72Q9CY97 Syvn1-201ENSMUST00000025723 2780 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Ssu72Q9CY97 AC121805.2-201ENSMUST00000218808 2538 ntBASIC14.28□□□□□ -0.12
Ssu72Q9CY97 Susd2-201ENSMUST00000077610 2275 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Ssu72Q9CY97 Galns-203ENSMUST00000212319 2111 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Ssu72Q9CY97 Esm1-201ENSMUST00000038144 2097 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Ssu72Q9CY97 Rxra-203ENSMUST00000113934 1989 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Ssu72Q9CY97 Pisd-202ENSMUST00000071829 1986 ntTSL 5 BASIC14.27□□□□□ -0.12
Ssu72Q9CY97 Gtf2ird1-229ENSMUST00000202554 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Ssu72Q9CY97 Ap2a1-203ENSMUST00000166972 3449 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Ssu72Q9CY97 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Ssu72Q9CY97 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Ssu72Q9CY97 Ccne2-202ENSMUST00000108324 2908 ntAPPRIS P4 TSL 1 (best) BASIC14.27□□□□□ -0.12
Ssu72Q9CY97 5730409E04Rik-201ENSMUST00000097886 2886 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Ssu72Q9CY97 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Ssu72Q9CY97 Gm18856-201ENSMUST00000178096 1374 ntBASIC14.27□□□□□ -0.12
Ssu72Q9CY97 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Ssu72Q9CY97 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Ssu72Q9CY97 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Ssu72Q9CY97 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC14.27□□□□□ -0.13
Ssu72Q9CY97 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC14.27□□□□□ -0.13
Ssu72Q9CY97 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ssu72Q9CY97 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ssu72Q9CY97 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC14.27□□□□□ -0.13
Ssu72Q9CY97 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC14.27□□□□□ -0.13
Ssu72Q9CY97 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ssu72Q9CY97 Tnip2-201ENSMUST00000030991 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ssu72Q9CY97 Fbxo25-201ENSMUST00000043520 2012 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ssu72Q9CY97 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ssu72Q9CY97 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Ssu72Q9CY97 AW822073-202ENSMUST00000204003 1959 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
Ssu72Q9CY97 AC126549.2-201ENSMUST00000223997 1976 ntBASIC14.27□□□□□ -0.13
Ssu72Q9CY97 Zbtb17-201ENSMUST00000006377 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ssu72Q9CY97 Bscl2-206ENSMUST00000160556 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ssu72Q9CY97 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ssu72Q9CY97 Fam174a-202ENSMUST00000186780 3460 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ssu72Q9CY97 Slc52a3-204ENSMUST00000109861 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ssu72Q9CY97 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ssu72Q9CY97 Tmem101-201ENSMUST00000021296 1574 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ssu72Q9CY97 Otop2-202ENSMUST00000106544 2220 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ssu72Q9CY97 Ccdc151-201ENSMUST00000044926 2197 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ssu72Q9CY97 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC14.26□□□□□ -0.13
Ssu72Q9CY97 Dennd4c-201ENSMUST00000045512 5648 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Ssu72Q9CY97 Hspb7-201ENSMUST00000102486 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 27.5 ms