Protein–RNA interactions for Protein: Q9CWM4

Pfdn1, Prefoldin subunit 1, mousemouse

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pfdn1Q9CWM4 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC12.64□□□□□ -0.39
Pfdn1Q9CWM4 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Pfdn1Q9CWM4 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Pfdn1Q9CWM4 Fam198a-202ENSMUST00000213773 2088 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Pfdn1Q9CWM4 Itga2b-201ENSMUST00000103086 3437 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Pfdn1Q9CWM4 Arhgap35-202ENSMUST00000171937 6251 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Pfdn1Q9CWM4 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC12.64□□□□□ -0.39
Pfdn1Q9CWM4 Ncapd3-201ENSMUST00000073127 5499 ntAPPRIS P2 TSL 5 BASIC12.64□□□□□ -0.39
Pfdn1Q9CWM4 Adam19-201ENSMUST00000011400 6383 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Pfdn1Q9CWM4 Elk1-201ENSMUST00000009550 3548 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Pfdn1Q9CWM4 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Pfdn1Q9CWM4 B230206H07Rik-202ENSMUST00000134845 3269 ntTSL 5 BASIC12.64□□□□□ -0.39
Pfdn1Q9CWM4 Tcp10b-202ENSMUST00000116666 2588 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Pfdn1Q9CWM4 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC12.64□□□□□ -0.39
Pfdn1Q9CWM4 Ackr4-204ENSMUST00000219146 1654 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Pfdn1Q9CWM4 Chst15-201ENSMUST00000077472 5041 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Pfdn1Q9CWM4 Fgd3-203ENSMUST00000110087 4698 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Pfdn1Q9CWM4 Gm3764-205ENSMUST00000181134 2203 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Pfdn1Q9CWM4 Rasgef1a-202ENSMUST00000203482 2227 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Pfdn1Q9CWM4 Spib-201ENSMUST00000035323 2788 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Pfdn1Q9CWM4 Adrb3-201ENSMUST00000081438 2795 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Pfdn1Q9CWM4 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Pfdn1Q9CWM4 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Pfdn1Q9CWM4 Wdfy2-201ENSMUST00000014691 6646 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Pfdn1Q9CWM4 2810403A07Rik-201ENSMUST00000029696 2981 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Pfdn1Q9CWM4 Xpr1-203ENSMUST00000111775 4094 ntTSL 5 BASIC12.63□□□□□ -0.39
Pfdn1Q9CWM4 Fbxl4-201ENSMUST00000039234 2546 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Pfdn1Q9CWM4 Trim32-202ENSMUST00000107366 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Pfdn1Q9CWM4 Ibsp-201ENSMUST00000031246 2068 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Pfdn1Q9CWM4 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Pfdn1Q9CWM4 Tkfc-201ENSMUST00000037678 2253 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Pfdn1Q9CWM4 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Pfdn1Q9CWM4 4930513N10Rik-204ENSMUST00000212647 3957 ntBASIC12.63□□□□□ -0.39
Pfdn1Q9CWM4 Pik3cd-206ENSMUST00000122059 4832 ntAPPRIS ALT1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Pfdn1Q9CWM4 Grm5-201ENSMUST00000107263 3516 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Pfdn1Q9CWM4 Tbc1d1-202ENSMUST00000101195 5432 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Pfdn1Q9CWM4 4933431E20Rik-201ENSMUST00000131345 5407 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Pfdn1Q9CWM4 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Pfdn1Q9CWM4 Lamtor2-202ENSMUST00000119002 568 ntTSL 2 BASIC12.63□□□□□ -0.39
Pfdn1Q9CWM4 Gm15378-201ENSMUST00000121894 207 ntBASIC12.63□□□□□ -0.39
Pfdn1Q9CWM4 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC12.63□□□□□ -0.39
Pfdn1Q9CWM4 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC12.63□□□□□ -0.39
Pfdn1Q9CWM4 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Pfdn1Q9CWM4 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC12.63□□□□□ -0.39
Pfdn1Q9CWM4 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Pfdn1Q9CWM4 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC12.63□□□□□ -0.39
Pfdn1Q9CWM4 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Pfdn1Q9CWM4 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Pfdn1Q9CWM4 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Pfdn1Q9CWM4 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Pfdn1Q9CWM4 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Pfdn1Q9CWM4 Gtf2i-203ENSMUST00000111261 4381 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Pfdn1Q9CWM4 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Pfdn1Q9CWM4 Ces2e-202ENSMUST00000109410 1999 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Pfdn1Q9CWM4 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Pfdn1Q9CWM4 Psg23-201ENSMUST00000057810 2179 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Pfdn1Q9CWM4 Ebf3-203ENSMUST00000168203 3724 ntAPPRIS ALT1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Pfdn1Q9CWM4 Hmga2-203ENSMUST00000159699 3810 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Pfdn1Q9CWM4 Cacna2d1-201ENSMUST00000039370 3933 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Pfdn1Q9CWM4 Tacc3-202ENSMUST00000079534 2899 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Pfdn1Q9CWM4 Mmp2-201ENSMUST00000034187 3078 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Pfdn1Q9CWM4 Dpp9-201ENSMUST00000038794 3374 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Pfdn1Q9CWM4 Phldb1-213ENSMUST00000144251 3589 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Pfdn1Q9CWM4 Cdc37l1-207ENSMUST00000225210 4163 ntAPPRIS ALT2 BASIC12.62□□□□□ -0.39
Pfdn1Q9CWM4 Ubqln5-201ENSMUST00000053743 1915 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Pfdn1Q9CWM4 Lrrc74b-201ENSMUST00000023442 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pfdn1Q9CWM4 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pfdn1Q9CWM4 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Pfdn1Q9CWM4 Stx11-201ENSMUST00000042861 4173 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pfdn1Q9CWM4 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pfdn1Q9CWM4 Atp6v1b1-201ENSMUST00000006431 1999 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pfdn1Q9CWM4 Gm13305-201ENSMUST00000098121 1953 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pfdn1Q9CWM4 Ddx39b-202ENSMUST00000172549 1770 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pfdn1Q9CWM4 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Pfdn1Q9CWM4 Klhl14-201ENSMUST00000049105 4018 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pfdn1Q9CWM4 Gm10849-201ENSMUST00000100397 618 ntBASIC12.62□□□□□ -0.39
Pfdn1Q9CWM4 Gm10052-201ENSMUST00000168019 960 ntBASIC12.62□□□□□ -0.39
Pfdn1Q9CWM4 Gm7556-201ENSMUST00000201178 1084 ntBASIC12.62□□□□□ -0.39
Pfdn1Q9CWM4 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC12.62□□□□□ -0.39
Pfdn1Q9CWM4 Timm23-208ENSMUST00000226683 750 ntBASIC12.62□□□□□ -0.39
Pfdn1Q9CWM4 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pfdn1Q9CWM4 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Pfdn1Q9CWM4 Gm7729-201ENSMUST00000050143 801 ntBASIC12.62□□□□□ -0.39
Pfdn1Q9CWM4 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
Pfdn1Q9CWM4 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Pfdn1Q9CWM4 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Pfdn1Q9CWM4 Scn5a-201ENSMUST00000065196 8287 ntAPPRIS ALT1 TSL 5 BASIC12.62□□□□□ -0.39
Pfdn1Q9CWM4 Nol4-206ENSMUST00000164186 2622 ntAPPRIS P4 TSL 5 BASIC12.62□□□□□ -0.39
Pfdn1Q9CWM4 Tsku-204ENSMUST00000165901 2514 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pfdn1Q9CWM4 Espn-213ENSMUST00000105659 3595 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Pfdn1Q9CWM4 Dll1-201ENSMUST00000014917 3581 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pfdn1Q9CWM4 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC12.62□□□□□ -0.39
Pfdn1Q9CWM4 Atxn7l1os2-201ENSMUST00000138617 2019 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Pfdn1Q9CWM4 Ago1-201ENSMUST00000097888 7227 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pfdn1Q9CWM4 0610010F05Rik-208ENSMUST00000180260 4128 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pfdn1Q9CWM4 Tmem136-201ENSMUST00000061833 3503 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pfdn1Q9CWM4 Gck-203ENSMUST00000109823 2361 ntTSL 5 BASIC12.62□□□□□ -0.39
Pfdn1Q9CWM4 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pfdn1Q9CWM4 Pik3r6-202ENSMUST00000102613 3225 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pfdn1Q9CWM4 Strip1-201ENSMUST00000064759 3215 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 54.7 ms