Protein–RNA interactions for Protein: Q99PQ2

Trim11, E3 ubiquitin-protein ligase TRIM11, mousemouse

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim11Q99PQ2 Saa2-203ENSMUST00000210769 652 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trim11Q99PQ2 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trim11Q99PQ2 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trim11Q99PQ2 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Trim11Q99PQ2 Saa2-201ENSMUST00000075982 606 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trim11Q99PQ2 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trim11Q99PQ2 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trim11Q99PQ2 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trim11Q99PQ2 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trim11Q99PQ2 Kcng1-201ENSMUST00000099069 2316 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trim11Q99PQ2 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trim11Q99PQ2 Etl4-208ENSMUST00000114614 5898 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trim11Q99PQ2 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trim11Q99PQ2 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trim11Q99PQ2 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Trim11Q99PQ2 Rnf217-201ENSMUST00000081989 11013 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
Trim11Q99PQ2 Mtif2-202ENSMUST00000093239 2741 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trim11Q99PQ2 Taok2-201ENSMUST00000071268 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trim11Q99PQ2 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trim11Q99PQ2 Poli-202ENSMUST00000121674 2778 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trim11Q99PQ2 Trim68-205ENSMUST00000210855 2301 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Trim11Q99PQ2 Kctd14-201ENSMUST00000050732 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trim11Q99PQ2 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trim11Q99PQ2 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trim11Q99PQ2 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Trim11Q99PQ2 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
Trim11Q99PQ2 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
Trim11Q99PQ2 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trim11Q99PQ2 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC16.4■□□□□ 0.22
Trim11Q99PQ2 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC16.4■□□□□ 0.22
Trim11Q99PQ2 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trim11Q99PQ2 Olfr370-201ENSMUST00000058609 1096 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
Trim11Q99PQ2 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trim11Q99PQ2 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trim11Q99PQ2 Srp72-202ENSMUST00000120550 2297 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
Trim11Q99PQ2 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trim11Q99PQ2 Pak1-205ENSMUST00000206984 2794 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
Trim11Q99PQ2 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Trim11Q99PQ2 Scarf1-202ENSMUST00000118243 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trim11Q99PQ2 Fbrs-202ENSMUST00000205432 4166 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
Trim11Q99PQ2 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trim11Q99PQ2 Bid-201ENSMUST00000004560 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trim11Q99PQ2 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trim11Q99PQ2 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trim11Q99PQ2 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
Trim11Q99PQ2 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
Trim11Q99PQ2 Gm12503-201ENSMUST00000146576 3127 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Trim11Q99PQ2 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trim11Q99PQ2 Eif4g1-204ENSMUST00000115460 5638 ntAPPRIS P3 TSL 5 BASIC16.39■□□□□ 0.21
Trim11Q99PQ2 Dagla-201ENSMUST00000039327 5634 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Trim11Q99PQ2 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trim11Q99PQ2 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Trim11Q99PQ2 Rnf181-201ENSMUST00000069580 1434 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trim11Q99PQ2 Pctp-201ENSMUST00000020864 2723 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trim11Q99PQ2 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC16.39■□□□□ 0.21
Trim11Q99PQ2 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
Trim11Q99PQ2 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Trim11Q99PQ2 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Trim11Q99PQ2 Gm44487-201ENSMUST00000205145 325 ntBASIC16.39■□□□□ 0.21
Trim11Q99PQ2 Bloc1s5-203ENSMUST00000224902 612 ntBASIC16.39■□□□□ 0.21
Trim11Q99PQ2 Eef1akmt2-201ENSMUST00000033257 1107 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trim11Q99PQ2 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trim11Q99PQ2 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trim11Q99PQ2 Prss44-201ENSMUST00000098345 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trim11Q99PQ2 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trim11Q99PQ2 Ttyh2-201ENSMUST00000045779 3486 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trim11Q99PQ2 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trim11Q99PQ2 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trim11Q99PQ2 D130052B06Rik-201ENSMUST00000101371 2295 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trim11Q99PQ2 Mtmr7-202ENSMUST00000048898 2488 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trim11Q99PQ2 Pear1-205ENSMUST00000172621 4490 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trim11Q99PQ2 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trim11Q99PQ2 Lzts1-201ENSMUST00000037049 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trim11Q99PQ2 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
Trim11Q99PQ2 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
Trim11Q99PQ2 Plppr2-202ENSMUST00000188468 1480 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
Trim11Q99PQ2 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC16.38■□□□□ 0.21
Trim11Q99PQ2 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC16.38■□□□□ 0.21
Trim11Q99PQ2 Gm15467-201ENSMUST00000120582 445 ntBASIC16.38■□□□□ 0.21
Trim11Q99PQ2 Gm11025-201ENSMUST00000140773 466 ntBASIC16.38■□□□□ 0.21
Trim11Q99PQ2 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Trim11Q99PQ2 Abhd18-207ENSMUST00000203892 1021 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Trim11Q99PQ2 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
Trim11Q99PQ2 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC16.38■□□□□ 0.21
Trim11Q99PQ2 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Trim11Q99PQ2 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trim11Q99PQ2 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trim11Q99PQ2 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
Trim11Q99PQ2 Marveld3-202ENSMUST00000051430 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trim11Q99PQ2 Sema6d-208ENSMUST00000103241 6157 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
Trim11Q99PQ2 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC16.38■□□□□ 0.21
Trim11Q99PQ2 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trim11Q99PQ2 Cluh-202ENSMUST00000117818 4284 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trim11Q99PQ2 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trim11Q99PQ2 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trim11Q99PQ2 Dmxl1-202ENSMUST00000180611 11319 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trim11Q99PQ2 Slc8b1-203ENSMUST00000111889 1624 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
Trim11Q99PQ2 Gnpda2-201ENSMUST00000031117 1894 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trim11Q99PQ2 Ctu2-201ENSMUST00000116412 3066 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trim11Q99PQ2 Fam76a-201ENSMUST00000030696 3053 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 58.9 ms