Protein–RNA interactions for Protein: Q91VD8

Pcdhb17, MCG141290, mousemouse

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb17Q91VD8 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdhb17Q91VD8 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdhb17Q91VD8 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdhb17Q91VD8 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdhb17Q91VD8 Tex44-201ENSMUST00000046004 1724 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
Pcdhb17Q91VD8 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdhb17Q91VD8 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdhb17Q91VD8 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdhb17Q91VD8 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC15.15■□□□□ 0.02
Pcdhb17Q91VD8 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC15.15■□□□□ 0.02
Pcdhb17Q91VD8 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdhb17Q91VD8 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC15.15■□□□□ 0.02
Pcdhb17Q91VD8 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC15.15■□□□□ 0.02
Pcdhb17Q91VD8 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC15.15■□□□□ 0.02
Pcdhb17Q91VD8 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC15.15■□□□□ 0.02
Pcdhb17Q91VD8 1700125G22Rik-201ENSMUST00000181124 861 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdhb17Q91VD8 Gm27427-201ENSMUST00000185134 193 ntBASIC15.15■□□□□ 0.02
Pcdhb17Q91VD8 Gm28721-201ENSMUST00000187649 918 ntTSL 3 BASIC15.15■□□□□ 0.02
Pcdhb17Q91VD8 Gm29018-201ENSMUST00000188707 925 ntTSL 3 BASIC15.15■□□□□ 0.02
Pcdhb17Q91VD8 Gm29538-201ENSMUST00000190783 471 ntTSL 2 BASIC15.15■□□□□ 0.02
Pcdhb17Q91VD8 Gm42723-202ENSMUST00000200561 1254 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdhb17Q91VD8 Gm43125-201ENSMUST00000201724 730 ntBASIC15.15■□□□□ 0.02
Pcdhb17Q91VD8 4930557J02Rik-201ENSMUST00000202325 1075 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdhb17Q91VD8 Pomc-201ENSMUST00000020990 1031 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdhb17Q91VD8 AC131710.1-201ENSMUST00000228336 990 ntBASIC15.15■□□□□ 0.02
Pcdhb17Q91VD8 Caly-201ENSMUST00000026541 1220 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdhb17Q91VD8 Wdr73-201ENSMUST00000026816 2114 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdhb17Q91VD8 Gngt1-201ENSMUST00000031673 1183 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdhb17Q91VD8 Gm8396-201ENSMUST00000057361 823 ntBASIC15.15■□□□□ 0.02
Pcdhb17Q91VD8 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC15.15■□□□□ 0.02
Pcdhb17Q91VD8 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdhb17Q91VD8 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdhb17Q91VD8 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdhb17Q91VD8 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdhb17Q91VD8 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdhb17Q91VD8 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdhb17Q91VD8 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdhb17Q91VD8 Gm42632-201ENSMUST00000201707 2411 ntBASIC15.15■□□□□ 0.02
Pcdhb17Q91VD8 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdhb17Q91VD8 Carlr-201ENSMUST00000181515 2574 ntBASIC15.15■□□□□ 0.02
Pcdhb17Q91VD8 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdhb17Q91VD8 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdhb17Q91VD8 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
Pcdhb17Q91VD8 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdhb17Q91VD8 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.02
Pcdhb17Q91VD8 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pcdhb17Q91VD8 Gm10110-201ENSMUST00000081204 1891 ntTSL 5 BASIC15.14■□□□□ 0.01
Pcdhb17Q91VD8 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pcdhb17Q91VD8 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Pcdhb17Q91VD8 Gm37728-201ENSMUST00000195025 2292 ntBASIC15.14■□□□□ 0.01
Pcdhb17Q91VD8 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pcdhb17Q91VD8 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pcdhb17Q91VD8 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Pcdhb17Q91VD8 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pcdhb17Q91VD8 Skint10-201ENSMUST00000060327 1376 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pcdhb17Q91VD8 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pcdhb17Q91VD8 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pcdhb17Q91VD8 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Pcdhb17Q91VD8 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC15.14■□□□□ 0.01
Pcdhb17Q91VD8 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pcdhb17Q91VD8 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC15.14■□□□□ 0.01
Pcdhb17Q91VD8 Gm9768-201ENSMUST00000206007 2861 ntBASIC15.14■□□□□ 0.01
Pcdhb17Q91VD8 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pcdhb17Q91VD8 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC15.14■□□□□ 0.01
Pcdhb17Q91VD8 Tex22-202ENSMUST00000109729 735 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pcdhb17Q91VD8 Gm11637-201ENSMUST00000120601 592 ntBASIC15.14■□□□□ 0.01
Pcdhb17Q91VD8 Gm8089-201ENSMUST00000122463 968 ntBASIC15.14■□□□□ 0.01
Pcdhb17Q91VD8 Gm15445-201ENSMUST00000146700 603 ntTSL 5 BASIC15.14■□□□□ 0.01
Pcdhb17Q91VD8 9130230N09Rik-201ENSMUST00000174568 663 ntTSL 3 BASIC15.14■□□□□ 0.01
Pcdhb17Q91VD8 1700122D07Rik-201ENSMUST00000186973 421 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Pcdhb17Q91VD8 Gm37230-201ENSMUST00000194491 818 ntBASIC15.14■□□□□ 0.01
Pcdhb17Q91VD8 Gm43474-201ENSMUST00000196415 774 ntBASIC15.14■□□□□ 0.01
Pcdhb17Q91VD8 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC15.14■□□□□ 0.01
Pcdhb17Q91VD8 AC154264.1-201ENSMUST00000216064 386 ntTSL 5 BASIC15.14■□□□□ 0.01
Pcdhb17Q91VD8 Gm9182-201ENSMUST00000217829 639 ntBASIC15.14■□□□□ 0.01
Pcdhb17Q91VD8 AC140368.1-202ENSMUST00000226131 658 ntBASIC15.14■□□□□ 0.01
Pcdhb17Q91VD8 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Pcdhb17Q91VD8 Obp1b-201ENSMUST00000088198 797 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pcdhb17Q91VD8 Gm39526-201ENSMUST00000208925 1413 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Pcdhb17Q91VD8 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Pcdhb17Q91VD8 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Pcdhb17Q91VD8 Zbtb14-201ENSMUST00000062369 3625 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pcdhb17Q91VD8 Ankrd10-202ENSMUST00000169782 5156 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Pcdhb17Q91VD8 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pcdhb17Q91VD8 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pcdhb17Q91VD8 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pcdhb17Q91VD8 Fbxo25-201ENSMUST00000043520 2012 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pcdhb17Q91VD8 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pcdhb17Q91VD8 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pcdhb17Q91VD8 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Pcdhb17Q91VD8 Gm42478-201ENSMUST00000199252 1467 ntBASIC15.14■□□□□ 0.01
Pcdhb17Q91VD8 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pcdhb17Q91VD8 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Pcdhb17Q91VD8 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pcdhb17Q91VD8 Clec12b-201ENSMUST00000032261 1521 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pcdhb17Q91VD8 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Pcdhb17Q91VD8 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pcdhb17Q91VD8 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Pcdhb17Q91VD8 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Pcdhb17Q91VD8 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 29.6 ms