Protein–RNA interactions for Protein: Q8VIK3

H1foo, Histone H1oo, mousemouse

Predictions only

Length 304 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H1fooQ8VIK3 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
H1fooQ8VIK3 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC12.07□□□□□ -0.48
H1fooQ8VIK3 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC12.07□□□□□ -0.48
H1fooQ8VIK3 Gm996-201ENSMUST00000114217 4881 ntAPPRIS P1 TSL 2 BASIC12.07□□□□□ -0.48
H1fooQ8VIK3 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
H1fooQ8VIK3 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC12.07□□□□□ -0.48
H1fooQ8VIK3 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC12.07□□□□□ -0.48
H1fooQ8VIK3 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
H1fooQ8VIK3 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
H1fooQ8VIK3 Gm45098-201ENSMUST00000207179 657 ntBASIC12.07□□□□□ -0.48
H1fooQ8VIK3 CT025555.1-201ENSMUST00000225901 1217 ntBASIC12.07□□□□□ -0.48
H1fooQ8VIK3 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
H1fooQ8VIK3 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
H1fooQ8VIK3 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
H1fooQ8VIK3 Grid2ip-202ENSMUST00000110733 3825 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
H1fooQ8VIK3 Pomt2-201ENSMUST00000037788 5064 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
H1fooQ8VIK3 Mapt-203ENSMUST00000106989 2250 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
H1fooQ8VIK3 Lipo3-201ENSMUST00000025694 2768 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
H1fooQ8VIK3 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
H1fooQ8VIK3 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
H1fooQ8VIK3 Fmnl2-205ENSMUST00000155586 3939 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
H1fooQ8VIK3 Nr2e3-201ENSMUST00000034831 2037 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
H1fooQ8VIK3 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
H1fooQ8VIK3 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
H1fooQ8VIK3 Btbd10-201ENSMUST00000047091 2581 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
H1fooQ8VIK3 Eif4g3-215ENSMUST00000203828 5289 ntTSL 5 BASIC12.06□□□□□ -0.48
H1fooQ8VIK3 Gm17619-201ENSMUST00000180625 1449 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
H1fooQ8VIK3 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC12.06□□□□□ -0.48
H1fooQ8VIK3 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
H1fooQ8VIK3 Ptprk-201ENSMUST00000166468 6177 ntAPPRIS P2 TSL 2 BASIC12.06□□□□□ -0.48
H1fooQ8VIK3 Sfxn5-203ENSMUST00000113787 638 ntTSL 2 BASIC12.06□□□□□ -0.48
H1fooQ8VIK3 Gm12892-201ENSMUST00000117367 1146 ntBASIC12.06□□□□□ -0.48
H1fooQ8VIK3 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC12.06□□□□□ -0.48
H1fooQ8VIK3 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC12.06□□□□□ -0.48
H1fooQ8VIK3 Gm14042-201ENSMUST00000120139 833 ntBASIC12.06□□□□□ -0.48
H1fooQ8VIK3 Gm15483-201ENSMUST00000120338 456 ntBASIC12.06□□□□□ -0.48
H1fooQ8VIK3 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC12.06□□□□□ -0.48
H1fooQ8VIK3 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC12.06□□□□□ -0.48
H1fooQ8VIK3 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC12.06□□□□□ -0.48
H1fooQ8VIK3 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
H1fooQ8VIK3 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
H1fooQ8VIK3 Mir8117-201ENSMUST00000184773 107 ntBASIC12.06□□□□□ -0.48
H1fooQ8VIK3 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
H1fooQ8VIK3 AC090659.1-201ENSMUST00000224334 768 ntBASIC12.06□□□□□ -0.48
H1fooQ8VIK3 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
H1fooQ8VIK3 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
H1fooQ8VIK3 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
H1fooQ8VIK3 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
H1fooQ8VIK3 Olfr520-201ENSMUST00000098264 951 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
H1fooQ8VIK3 Hcn3-201ENSMUST00000029686 4002 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
H1fooQ8VIK3 Gucy2e-202ENSMUST00000108664 4415 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
H1fooQ8VIK3 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
H1fooQ8VIK3 Canx-205ENSMUST00000179865 4281 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
H1fooQ8VIK3 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
H1fooQ8VIK3 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
H1fooQ8VIK3 Grm7-201ENSMUST00000071076 3127 ntAPPRIS ALT1 TSL 5 BASIC12.06□□□□□ -0.48
H1fooQ8VIK3 Lpar2-202ENSMUST00000164890 5800 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
H1fooQ8VIK3 Emc7-201ENSMUST00000069747 5826 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
H1fooQ8VIK3 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
H1fooQ8VIK3 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
H1fooQ8VIK3 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
H1fooQ8VIK3 Tmem8b-202ENSMUST00000107865 4775 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
H1fooQ8VIK3 Asxl1-201ENSMUST00000109790 6968 ntAPPRIS P2 TSL 5 BASIC12.06□□□□□ -0.48
H1fooQ8VIK3 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
H1fooQ8VIK3 Dlk1-205ENSMUST00000109844 1703 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
H1fooQ8VIK3 Rsrp1-201ENSMUST00000078084 1749 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
H1fooQ8VIK3 Arid5a-201ENSMUST00000097778 2270 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
H1fooQ8VIK3 Psma3-202ENSMUST00000160027 2846 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
H1fooQ8VIK3 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC12.06□□□□□ -0.48
H1fooQ8VIK3 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
H1fooQ8VIK3 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
H1fooQ8VIK3 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
H1fooQ8VIK3 Sned1-201ENSMUST00000062202 9147 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
H1fooQ8VIK3 Ap4b1-202ENSMUST00000076599 2692 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
H1fooQ8VIK3 Pxn-213ENSMUST00000202564 2126 ntTSL 5 BASIC12.05□□□□□ -0.48
H1fooQ8VIK3 Kcnip1-202ENSMUST00000101368 2322 ntTSL 2 BASIC12.05□□□□□ -0.48
H1fooQ8VIK3 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
H1fooQ8VIK3 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
H1fooQ8VIK3 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
H1fooQ8VIK3 Fbln7-201ENSMUST00000028864 2905 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
H1fooQ8VIK3 Fbxo10-201ENSMUST00000052236 4635 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
H1fooQ8VIK3 Tars2-204ENSMUST00000163530 2157 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
H1fooQ8VIK3 Gm9252-201ENSMUST00000172364 1602 ntBASIC12.05□□□□□ -0.48
H1fooQ8VIK3 Yap1-202ENSMUST00000086580 4115 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
H1fooQ8VIK3 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
H1fooQ8VIK3 Ly6h-207ENSMUST00000163116 2801 ntAPPRIS ALT1 TSL 2 BASIC12.05□□□□□ -0.48
H1fooQ8VIK3 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC12.05□□□□□ -0.48
H1fooQ8VIK3 Gm17271-201ENSMUST00000165535 355 ntBASIC12.05□□□□□ -0.48
H1fooQ8VIK3 Mir3113-201ENSMUST00000175478 76 ntBASIC12.05□□□□□ -0.48
H1fooQ8VIK3 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC12.05□□□□□ -0.48
H1fooQ8VIK3 CR974585.1-201ENSMUST00000221790 1263 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
H1fooQ8VIK3 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
H1fooQ8VIK3 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
H1fooQ8VIK3 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
H1fooQ8VIK3 Sem1-201ENSMUST00000041111 1472 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
H1fooQ8VIK3 Pcdh7-203ENSMUST00000191837 8785 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
H1fooQ8VIK3 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
H1fooQ8VIK3 Tbrg4-201ENSMUST00000000394 2290 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
H1fooQ8VIK3 Fgd6-201ENSMUST00000020208 8044 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
H1fooQ8VIK3 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 28.1 ms