Protein–RNA interactions for Protein: Q8VI88

Odf4, Outer dense fiber protein 4, mousemouse

Predictions only

Length 290 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Odf4Q8VI88 Apc-202ENSMUST00000079362 8867 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Odf4Q8VI88 Cplx2-201ENSMUST00000026985 4928 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
Odf4Q8VI88 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Odf4Q8VI88 Gm43056-201ENSMUST00000197865 2791 ntBASIC12.93□□□□□ -0.34
Odf4Q8VI88 Ap4b1-201ENSMUST00000047285 2799 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Odf4Q8VI88 Ccdc92b-201ENSMUST00000100866 4002 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Odf4Q8VI88 Rassf5-201ENSMUST00000027688 3485 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Odf4Q8VI88 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Odf4Q8VI88 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Odf4Q8VI88 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Odf4Q8VI88 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Odf4Q8VI88 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Odf4Q8VI88 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Odf4Q8VI88 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Odf4Q8VI88 Ksr1-207ENSMUST00000226282 5260 ntBASIC12.93□□□□□ -0.34
Odf4Q8VI88 AC162938.1-201ENSMUST00000213140 2323 ntBASIC12.93□□□□□ -0.34
Odf4Q8VI88 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Odf4Q8VI88 Bhmt2-201ENSMUST00000015941 2467 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Odf4Q8VI88 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
Odf4Q8VI88 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC12.93□□□□□ -0.34
Odf4Q8VI88 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Odf4Q8VI88 Gm11025-201ENSMUST00000140773 466 ntBASIC12.93□□□□□ -0.34
Odf4Q8VI88 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Odf4Q8VI88 Gm18246-201ENSMUST00000221023 728 ntBASIC12.93□□□□□ -0.34
Odf4Q8VI88 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Odf4Q8VI88 Naa30-201ENSMUST00000037362 4464 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Odf4Q8VI88 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Odf4Q8VI88 Socs3-201ENSMUST00000054002 2552 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Odf4Q8VI88 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Odf4Q8VI88 Opa1-201ENSMUST00000038867 3230 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Odf4Q8VI88 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Odf4Q8VI88 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC12.93□□□□□ -0.34
Odf4Q8VI88 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC12.93□□□□□ -0.34
Odf4Q8VI88 Gm17315-201ENSMUST00000181408 2504 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Odf4Q8VI88 Kif3c-205ENSMUST00000220210 4144 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Odf4Q8VI88 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Odf4Q8VI88 Flt4-201ENSMUST00000020617 6255 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Odf4Q8VI88 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Odf4Q8VI88 Tex13b-201ENSMUST00000044179 2116 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Odf4Q8VI88 Cmpk2-201ENSMUST00000020969 3200 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Odf4Q8VI88 Smc6-208ENSMUST00000218866 3373 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Odf4Q8VI88 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Odf4Q8VI88 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Odf4Q8VI88 Nacad-201ENSMUST00000045713 4892 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Odf4Q8VI88 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC12.92□□□□□ -0.34
Odf4Q8VI88 Psma3-202ENSMUST00000160027 2846 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Odf4Q8VI88 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC12.92□□□□□ -0.34
Odf4Q8VI88 Pelp1-201ENSMUST00000019065 3435 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Odf4Q8VI88 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Odf4Q8VI88 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Odf4Q8VI88 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC12.92□□□□□ -0.34
Odf4Q8VI88 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC12.92□□□□□ -0.34
Odf4Q8VI88 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Odf4Q8VI88 1700065D16Rik-205ENSMUST00000190890 2903 ntBASIC12.92□□□□□ -0.34
Odf4Q8VI88 Rnf144a-201ENSMUST00000020971 5164 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Odf4Q8VI88 Csrnp1-201ENSMUST00000035101 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Odf4Q8VI88 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Odf4Q8VI88 Elmod1-201ENSMUST00000048409 2605 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Odf4Q8VI88 Slc8a2-202ENSMUST00000211649 5261 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Odf4Q8VI88 Gm37844-201ENSMUST00000192473 4097 ntBASIC12.92□□□□□ -0.34
Odf4Q8VI88 Gtf2h1-201ENSMUST00000006774 2736 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Odf4Q8VI88 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Odf4Q8VI88 Eloa-201ENSMUST00000030427 4708 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Odf4Q8VI88 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Odf4Q8VI88 Slc45a1-201ENSMUST00000037827 3387 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Odf4Q8VI88 Nkx6-3-201ENSMUST00000071588 2238 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Odf4Q8VI88 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Odf4Q8VI88 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC12.92□□□□□ -0.34
Odf4Q8VI88 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Odf4Q8VI88 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Odf4Q8VI88 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
Odf4Q8VI88 Rcan1-201ENSMUST00000023672 2192 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Odf4Q8VI88 Gm29361-201ENSMUST00000183323 2000 ntBASIC12.91□□□□□ -0.34
Odf4Q8VI88 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Odf4Q8VI88 Sh3glb1-201ENSMUST00000163279 3961 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Odf4Q8VI88 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Odf4Q8VI88 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Odf4Q8VI88 Usp19-201ENSMUST00000006854 4791 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Odf4Q8VI88 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC12.91□□□□□ -0.34
Odf4Q8VI88 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Odf4Q8VI88 Aim2-202ENSMUST00000147604 2839 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Odf4Q8VI88 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Odf4Q8VI88 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Odf4Q8VI88 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Odf4Q8VI88 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Odf4Q8VI88 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Odf4Q8VI88 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Odf4Q8VI88 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Odf4Q8VI88 Gm27301-201ENSMUST00000184012 127 ntBASIC12.91□□□□□ -0.34
Odf4Q8VI88 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC12.91□□□□□ -0.34
Odf4Q8VI88 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Odf4Q8VI88 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Odf4Q8VI88 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Odf4Q8VI88 Rab11fip2-201ENSMUST00000051996 4482 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Odf4Q8VI88 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
Odf4Q8VI88 Wac-201ENSMUST00000074919 3070 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Odf4Q8VI88 Kcnq2-202ENSMUST00000049792 2920 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Odf4Q8VI88 Dnm1-214ENSMUST00000201433 3146 ntAPPRIS ALT1 TSL 5 BASIC12.91□□□□□ -0.34
Odf4Q8VI88 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
Odf4Q8VI88 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 36 ms