Protein–RNA interactions for Protein: Q8VC85

Lsm1, U6 snRNA-associated Sm-like protein LSm1, mousemouse

Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm1Q8VC85 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Lsm1Q8VC85 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Lsm1Q8VC85 P2rx3-202ENSMUST00000111613 1764 ntAPPRIS ALT1 TSL 5 BASIC13.81□□□□□ -0.2
Lsm1Q8VC85 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Lsm1Q8VC85 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Lsm1Q8VC85 Elk4-201ENSMUST00000027696 1586 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Lsm1Q8VC85 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Lsm1Q8VC85 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC13.81□□□□□ -0.2
Lsm1Q8VC85 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC13.81□□□□□ -0.2
Lsm1Q8VC85 Gm15483-201ENSMUST00000120338 456 ntBASIC13.81□□□□□ -0.2
Lsm1Q8VC85 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC13.81□□□□□ -0.2
Lsm1Q8VC85 CT025555.1-201ENSMUST00000225901 1217 ntBASIC13.81□□□□□ -0.2
Lsm1Q8VC85 Psmb5-202ENSMUST00000227257 622 ntBASIC13.81□□□□□ -0.2
Lsm1Q8VC85 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Lsm1Q8VC85 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
Lsm1Q8VC85 Gm20465-201ENSMUST00000174768 1932 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Lsm1Q8VC85 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Lsm1Q8VC85 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Lsm1Q8VC85 Sphk2-201ENSMUST00000072836 2968 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Lsm1Q8VC85 Dctn1-201ENSMUST00000077407 4118 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Lsm1Q8VC85 Dmkn-205ENSMUST00000165887 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Lsm1Q8VC85 Tmem19-203ENSMUST00000217884 2799 ntTSL 5 BASIC13.81□□□□□ -0.2
Lsm1Q8VC85 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Lsm1Q8VC85 Arhgef25-202ENSMUST00000167353 2189 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Lsm1Q8VC85 Camk2b-208ENSMUST00000109812 1875 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Lsm1Q8VC85 Fbrs-202ENSMUST00000205432 4166 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Lsm1Q8VC85 Catsper4-204ENSMUST00000169381 1506 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Lsm1Q8VC85 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Lsm1Q8VC85 Spryd4-201ENSMUST00000061995 1583 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Lsm1Q8VC85 Gm26565-201ENSMUST00000181642 1968 ntTSL 5 BASIC13.8□□□□□ -0.2
Lsm1Q8VC85 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Lsm1Q8VC85 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Lsm1Q8VC85 Nat6-201ENSMUST00000093785 2053 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Lsm1Q8VC85 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC13.8□□□□□ -0.2
Lsm1Q8VC85 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Lsm1Q8VC85 Gm18733-201ENSMUST00000173950 856 ntBASIC13.8□□□□□ -0.2
Lsm1Q8VC85 Klk2-ps-201ENSMUST00000205342 571 ntBASIC13.8□□□□□ -0.2
Lsm1Q8VC85 Gm44945-201ENSMUST00000206764 1187 ntBASIC13.8□□□□□ -0.2
Lsm1Q8VC85 Lyzl6-201ENSMUST00000021328 900 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Lsm1Q8VC85 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC13.8□□□□□ -0.2
Lsm1Q8VC85 AC154572.2-201ENSMUST00000225105 997 ntBASIC13.8□□□□□ -0.2
Lsm1Q8VC85 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Lsm1Q8VC85 Gm7461-201ENSMUST00000058918 827 ntBASIC13.8□□□□□ -0.2
Lsm1Q8VC85 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Lsm1Q8VC85 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Lsm1Q8VC85 Mfsd3-201ENSMUST00000019224 2169 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Lsm1Q8VC85 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Lsm1Q8VC85 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC13.8□□□□□ -0.2
Lsm1Q8VC85 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Lsm1Q8VC85 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Lsm1Q8VC85 Mmp14-206ENSMUST00000225641 3238 ntBASIC13.8□□□□□ -0.2
Lsm1Q8VC85 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC13.8□□□□□ -0.2
Lsm1Q8VC85 Six3os1-211ENSMUST00000176958 2889 ntTSL 2 BASIC13.8□□□□□ -0.2
Lsm1Q8VC85 Gm38102-201ENSMUST00000192791 1935 ntBASIC13.8□□□□□ -0.2
Lsm1Q8VC85 Rrp1-201ENSMUST00000062678 1984 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Lsm1Q8VC85 P2ry2-201ENSMUST00000037540 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Lsm1Q8VC85 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Lsm1Q8VC85 Ywhag-205ENSMUST00000198270 1610 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Lsm1Q8VC85 Cep126-201ENSMUST00000037397 3819 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Lsm1Q8VC85 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Lsm1Q8VC85 Tcf12-201ENSMUST00000034755 4621 ntAPPRIS ALT1 TSL 5 BASIC13.79□□□□□ -0.2
Lsm1Q8VC85 AC166491.1-201ENSMUST00000227053 2308 ntBASIC13.79□□□□□ -0.2
Lsm1Q8VC85 Gm38391-201ENSMUST00000191720 4069 ntBASIC13.79□□□□□ -0.2
Lsm1Q8VC85 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC13.79□□□□□ -0.2
Lsm1Q8VC85 Sgtb-201ENSMUST00000044385 3048 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Lsm1Q8VC85 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Lsm1Q8VC85 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Lsm1Q8VC85 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Lsm1Q8VC85 Mpl-201ENSMUST00000006556 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Lsm1Q8VC85 Dusp23-201ENSMUST00000027826 1410 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Lsm1Q8VC85 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC13.79□□□□□ -0.2
Lsm1Q8VC85 Klf4-201ENSMUST00000107619 3029 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Lsm1Q8VC85 Kcnq1-201ENSMUST00000009689 3029 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Lsm1Q8VC85 Cybrd1-201ENSMUST00000028403 5339 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Lsm1Q8VC85 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Lsm1Q8VC85 Etfdh-201ENSMUST00000029386 2377 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Lsm1Q8VC85 2810006K23Rik-202ENSMUST00000111477 1637 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Lsm1Q8VC85 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC13.79□□□□□ -0.2
Lsm1Q8VC85 Zfp566-201ENSMUST00000088785 1709 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Lsm1Q8VC85 Tcf25-208ENSMUST00000212571 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Lsm1Q8VC85 Yod1-201ENSMUST00000049813 6128 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Lsm1Q8VC85 Syt10-201ENSMUST00000029441 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Lsm1Q8VC85 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Lsm1Q8VC85 Stk16-201ENSMUST00000027401 2876 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Lsm1Q8VC85 Camsap2-202ENSMUST00000192001 6329 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Lsm1Q8VC85 Gm12892-201ENSMUST00000117367 1146 ntBASIC13.78□□□□□ -0.2
Lsm1Q8VC85 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Lsm1Q8VC85 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Lsm1Q8VC85 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
Lsm1Q8VC85 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Lsm1Q8VC85 Gm10275-202ENSMUST00000168697 495 ntBASIC13.78□□□□□ -0.2
Lsm1Q8VC85 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Lsm1Q8VC85 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
Lsm1Q8VC85 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Lsm1Q8VC85 Gm10275-201ENSMUST00000092620 635 ntBASIC13.78□□□□□ -0.2
Lsm1Q8VC85 Lrif1-202ENSMUST00000098751 929 ntTSL 2 BASIC13.78□□□□□ -0.2
Lsm1Q8VC85 Elovl6-205ENSMUST00000199910 2610 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Lsm1Q8VC85 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Lsm1Q8VC85 Foxi2-201ENSMUST00000060356 2657 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Lsm1Q8VC85 Wnt3a-201ENSMUST00000010044 2761 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 28.9 ms