Protein–RNA interactions for Protein: Q8R429

Atp2a1, Sarcoplasmic/endoplasmic reticulum calcium ATPase 1, mousemouse

Predictions only

Length 994 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atp2a1Q8R429 Disp2-202ENSMUST00000063975 1505 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Atp2a1Q8R429 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
Atp2a1Q8R429 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Atp2a1Q8R429 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Atp2a1Q8R429 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Atp2a1Q8R429 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
Atp2a1Q8R429 Gm11960-202ENSMUST00000181063 2858 ntBASIC16.07■□□□□ 0.16
Atp2a1Q8R429 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Atp2a1Q8R429 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Atp2a1Q8R429 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Atp2a1Q8R429 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
Atp2a1Q8R429 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Atp2a1Q8R429 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Atp2a1Q8R429 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Atp2a1Q8R429 Gm37736-201ENSMUST00000193564 2802 ntBASIC16.06■□□□□ 0.16
Atp2a1Q8R429 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Atp2a1Q8R429 Utp4-201ENSMUST00000047629 2232 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Atp2a1Q8R429 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Atp2a1Q8R429 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
Atp2a1Q8R429 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Atp2a1Q8R429 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Atp2a1Q8R429 Acrbp-205ENSMUST00000112414 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Atp2a1Q8R429 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
Atp2a1Q8R429 Pttg1ip-205ENSMUST00000162429 652 ntAPPRIS ALT2 TSL 2 BASIC16.06■□□□□ 0.16
Atp2a1Q8R429 Gm5108-201ENSMUST00000177891 543 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Atp2a1Q8R429 Gm5745-201ENSMUST00000183748 313 ntBASIC16.06■□□□□ 0.16
Atp2a1Q8R429 2410004P03Rik-203ENSMUST00000190691 953 ntTSL 2 BASIC16.06■□□□□ 0.16
Atp2a1Q8R429 Fmc1-201ENSMUST00000019833 479 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Atp2a1Q8R429 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Atp2a1Q8R429 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC16.06■□□□□ 0.16
Atp2a1Q8R429 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC16.06■□□□□ 0.16
Atp2a1Q8R429 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
Atp2a1Q8R429 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Atp2a1Q8R429 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Atp2a1Q8R429 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
Atp2a1Q8R429 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Atp2a1Q8R429 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
Atp2a1Q8R429 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
Atp2a1Q8R429 Adgrg5-205ENSMUST00000166802 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Atp2a1Q8R429 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Atp2a1Q8R429 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Atp2a1Q8R429 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Atp2a1Q8R429 Psmc3-202ENSMUST00000067663 1636 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Atp2a1Q8R429 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
Atp2a1Q8R429 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Atp2a1Q8R429 Rsbn1l-201ENSMUST00000036489 5550 ntAPPRIS P2 TSL 5 BASIC16.05■□□□□ 0.16
Atp2a1Q8R429 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Atp2a1Q8R429 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
Atp2a1Q8R429 Ppp1r14d-202ENSMUST00000110820 790 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Atp2a1Q8R429 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC16.05■□□□□ 0.16
Atp2a1Q8R429 Gm10275-202ENSMUST00000168697 495 ntBASIC16.05■□□□□ 0.16
Atp2a1Q8R429 1700055C04Rik-201ENSMUST00000176450 355 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Atp2a1Q8R429 AA619741-201ENSMUST00000195095 646 ntBASIC16.05■□□□□ 0.16
Atp2a1Q8R429 Gtpbp10-211ENSMUST00000198799 648 ntBASIC16.05■□□□□ 0.16
Atp2a1Q8R429 Gm42196-201ENSMUST00000209618 730 ntTSL 5 BASIC16.05■□□□□ 0.16
Atp2a1Q8R429 AC135669.1-201ENSMUST00000213585 412 ntBASIC16.05■□□□□ 0.16
Atp2a1Q8R429 Gm9229-201ENSMUST00000222777 126 ntBASIC16.05■□□□□ 0.16
Atp2a1Q8R429 Fam162a-201ENSMUST00000004057 635 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Atp2a1Q8R429 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Atp2a1Q8R429 Gm10275-201ENSMUST00000092620 635 ntBASIC16.05■□□□□ 0.16
Atp2a1Q8R429 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC16.05■□□□□ 0.16
Atp2a1Q8R429 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC16.05■□□□□ 0.16
Atp2a1Q8R429 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC16.05■□□□□ 0.16
Atp2a1Q8R429 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Atp2a1Q8R429 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Atp2a1Q8R429 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Atp2a1Q8R429 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Atp2a1Q8R429 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Atp2a1Q8R429 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Atp2a1Q8R429 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Atp2a1Q8R429 BC001981-202ENSMUST00000191393 1545 ntBASIC16.04■□□□□ 0.16
Atp2a1Q8R429 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Atp2a1Q8R429 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Atp2a1Q8R429 Dennd4c-201ENSMUST00000045512 5648 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
Atp2a1Q8R429 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Atp2a1Q8R429 Cdca5-201ENSMUST00000025704 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Atp2a1Q8R429 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Atp2a1Q8R429 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
Atp2a1Q8R429 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Atp2a1Q8R429 Arpc4-203ENSMUST00000203578 1323 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Atp2a1Q8R429 H1fnt-201ENSMUST00000060855 1326 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
Atp2a1Q8R429 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Atp2a1Q8R429 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC16.04■□□□□ 0.16
Atp2a1Q8R429 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Atp2a1Q8R429 Gm16091-201ENSMUST00000156664 963 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Atp2a1Q8R429 Ppcdc-205ENSMUST00000214144 724 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Atp2a1Q8R429 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Atp2a1Q8R429 Hfe-201ENSMUST00000006787 516 ntTSL 5 BASIC16.04■□□□□ 0.16
Atp2a1Q8R429 Gm4559-201ENSMUST00000080669 600 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
Atp2a1Q8R429 Hfe-203ENSMUST00000091707 816 ntTSL 5 BASIC16.04■□□□□ 0.16
Atp2a1Q8R429 Hist1h2al-201ENSMUST00000091708 339 ntBASIC16.04■□□□□ 0.16
Atp2a1Q8R429 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
Atp2a1Q8R429 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Atp2a1Q8R429 Ptprs-202ENSMUST00000086828 5608 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Atp2a1Q8R429 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Atp2a1Q8R429 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Atp2a1Q8R429 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Atp2a1Q8R429 Gm10406-202ENSMUST00000170738 1955 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
Atp2a1Q8R429 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Atp2a1Q8R429 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC16.03■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 41.1 ms