Protein–RNA interactions for Protein: Q8R3Q6

Ccdc58, Coiled-coil domain-containing protein 58, mousemouse

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc58Q8R3Q6 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ccdc58Q8R3Q6 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
Ccdc58Q8R3Q6 Itga6-202ENSMUST00000112101 4156 ntAPPRIS ALT1 TSL 5 BASIC12.94□□□□□ -0.34
Ccdc58Q8R3Q6 Clcn4-203ENSMUST00000210061 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ccdc58Q8R3Q6 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ccdc58Q8R3Q6 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ccdc58Q8R3Q6 Cpne6-202ENSMUST00000163767 2004 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ccdc58Q8R3Q6 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC12.94□□□□□ -0.34
Ccdc58Q8R3Q6 Slc8b1-204ENSMUST00000111890 2775 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Ccdc58Q8R3Q6 Arfip1-201ENSMUST00000098990 2799 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Ccdc58Q8R3Q6 Gm9279-201ENSMUST00000223175 1606 ntBASIC12.94□□□□□ -0.34
Ccdc58Q8R3Q6 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ccdc58Q8R3Q6 Il17re-202ENSMUST00000058548 2940 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ccdc58Q8R3Q6 Hells-201ENSMUST00000025965 5868 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ccdc58Q8R3Q6 Ksr1-207ENSMUST00000226282 5260 ntBASIC12.94□□□□□ -0.34
Ccdc58Q8R3Q6 Hdac5-203ENSMUST00000107151 4852 ntTSL 5 BASIC12.94□□□□□ -0.34
Ccdc58Q8R3Q6 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ccdc58Q8R3Q6 Arrdc4-201ENSMUST00000048068 3905 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ccdc58Q8R3Q6 Txnrd3-201ENSMUST00000000828 2836 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ccdc58Q8R3Q6 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Ccdc58Q8R3Q6 Map2k6-201ENSMUST00000020949 2068 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ccdc58Q8R3Q6 Ralgps2-214ENSMUST00000191605 2958 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ccdc58Q8R3Q6 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC12.93□□□□□ -0.34
Ccdc58Q8R3Q6 Acr-201ENSMUST00000023295 1504 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ccdc58Q8R3Q6 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC12.93□□□□□ -0.34
Ccdc58Q8R3Q6 Rnf168-201ENSMUST00000014218 3932 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ccdc58Q8R3Q6 Klhl15-201ENSMUST00000096369 3944 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Ccdc58Q8R3Q6 Rundc1-201ENSMUST00000040561 3223 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ccdc58Q8R3Q6 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ccdc58Q8R3Q6 Ahcy-201ENSMUST00000054607 2543 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ccdc58Q8R3Q6 Nol4-208ENSMUST00000164893 2175 ntAPPRIS ALT1 TSL 5 BASIC12.93□□□□□ -0.34
Ccdc58Q8R3Q6 Vta1-205ENSMUST00000154132 1974 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ccdc58Q8R3Q6 Rfx1-204ENSMUST00000211046 3677 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Ccdc58Q8R3Q6 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ccdc58Q8R3Q6 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Ccdc58Q8R3Q6 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ccdc58Q8R3Q6 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Ccdc58Q8R3Q6 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
Ccdc58Q8R3Q6 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Ccdc58Q8R3Q6 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC12.93□□□□□ -0.34
Ccdc58Q8R3Q6 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC12.93□□□□□ -0.34
Ccdc58Q8R3Q6 Csrnp1-204ENSMUST00000215916 2956 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ccdc58Q8R3Q6 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ccdc58Q8R3Q6 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ccdc58Q8R3Q6 Ssc5d-201ENSMUST00000057612 4348 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ccdc58Q8R3Q6 Tbr1-201ENSMUST00000048934 3977 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ccdc58Q8R3Q6 Tfe3-206ENSMUST00000115679 3239 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Ccdc58Q8R3Q6 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC12.93□□□□□ -0.34
Ccdc58Q8R3Q6 Gm2420-202ENSMUST00000202224 2249 ntBASIC12.93□□□□□ -0.34
Ccdc58Q8R3Q6 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ccdc58Q8R3Q6 Palm-201ENSMUST00000046945 2651 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ccdc58Q8R3Q6 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ccdc58Q8R3Q6 Erfe-201ENSMUST00000086861 2815 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ccdc58Q8R3Q6 Grk6-205ENSMUST00000224653 2976 ntBASIC12.93□□□□□ -0.34
Ccdc58Q8R3Q6 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Ccdc58Q8R3Q6 Abtb2-201ENSMUST00000076212 4558 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ccdc58Q8R3Q6 Ist1-201ENSMUST00000034164 2304 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ccdc58Q8R3Q6 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ccdc58Q8R3Q6 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ccdc58Q8R3Q6 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC12.92□□□□□ -0.34
Ccdc58Q8R3Q6 Fbln7-201ENSMUST00000028864 2905 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ccdc58Q8R3Q6 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ccdc58Q8R3Q6 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ccdc58Q8R3Q6 Ociad2-201ENSMUST00000087195 2554 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ccdc58Q8R3Q6 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ccdc58Q8R3Q6 Gm42416-201ENSMUST00000115661 2856 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
Ccdc58Q8R3Q6 Ext1-201ENSMUST00000077273 7663 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ccdc58Q8R3Q6 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ccdc58Q8R3Q6 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ccdc58Q8R3Q6 Irf7-203ENSMUST00000106023 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ccdc58Q8R3Q6 P4ha1-202ENSMUST00000092512 2387 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Ccdc58Q8R3Q6 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ccdc58Q8R3Q6 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC12.92□□□□□ -0.34
Ccdc58Q8R3Q6 Gm12644-201ENSMUST00000119935 606 ntBASIC12.92□□□□□ -0.34
Ccdc58Q8R3Q6 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ccdc58Q8R3Q6 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Ccdc58Q8R3Q6 Gm13830-205ENSMUST00000201195 1155 ntBASIC12.92□□□□□ -0.34
Ccdc58Q8R3Q6 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC12.92□□□□□ -0.34
Ccdc58Q8R3Q6 AC164567.1-201ENSMUST00000219185 960 ntBASIC12.92□□□□□ -0.34
Ccdc58Q8R3Q6 CT010506.4-201ENSMUST00000225457 351 ntBASIC12.92□□□□□ -0.34
Ccdc58Q8R3Q6 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ccdc58Q8R3Q6 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ccdc58Q8R3Q6 Ap4b1-203ENSMUST00000106823 2741 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Ccdc58Q8R3Q6 Troap-201ENSMUST00000039665 2264 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ccdc58Q8R3Q6 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Ccdc58Q8R3Q6 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ccdc58Q8R3Q6 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ccdc58Q8R3Q6 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ccdc58Q8R3Q6 Nphp4-202ENSMUST00000081393 5027 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ccdc58Q8R3Q6 Olfr718-ps1-202ENSMUST00000213631 4737 ntAPPRIS P5 TSL 5 BASIC12.92□□□□□ -0.34
Ccdc58Q8R3Q6 Gm26882-201ENSMUST00000181611 1537 ntTSL 5 BASIC12.92□□□□□ -0.34
Ccdc58Q8R3Q6 Dpp6-201ENSMUST00000071500 3826 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ccdc58Q8R3Q6 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ccdc58Q8R3Q6 Npnt-204ENSMUST00000117164 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ccdc58Q8R3Q6 Ero1lb-202ENSMUST00000220811 3341 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Ccdc58Q8R3Q6 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Ccdc58Q8R3Q6 Fbxo41-202ENSMUST00000161078 6562 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ccdc58Q8R3Q6 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ccdc58Q8R3Q6 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ccdc58Q8R3Q6 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 37.8 ms