Protein–RNA interactions for Protein: Q8CIK8

Rfwd3, E3 ubiquitin-protein ligase RFWD3, mousemouse

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfwd3Q8CIK8 Ppip5k2-202ENSMUST00000112845 6239 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
Rfwd3Q8CIK8 Rtn4-205ENSMUST00000102843 4618 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Rfwd3Q8CIK8 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Rfwd3Q8CIK8 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC13.56□□□□□ -0.24
Rfwd3Q8CIK8 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Rfwd3Q8CIK8 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Rfwd3Q8CIK8 Gm11682-201ENSMUST00000144689 516 ntTSL 3 BASIC13.56□□□□□ -0.24
Rfwd3Q8CIK8 Gm13849-201ENSMUST00000153328 835 ntTSL 5 BASIC13.56□□□□□ -0.24
Rfwd3Q8CIK8 Gm44335-201ENSMUST00000196879 141 ntBASIC13.56□□□□□ -0.24
Rfwd3Q8CIK8 Gm44297-201ENSMUST00000198304 141 ntBASIC13.56□□□□□ -0.24
Rfwd3Q8CIK8 Gm44346-201ENSMUST00000198851 141 ntBASIC13.56□□□□□ -0.24
Rfwd3Q8CIK8 Gm34964-201ENSMUST00000207398 417 ntTSL 5 BASIC13.56□□□□□ -0.24
Rfwd3Q8CIK8 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC13.56□□□□□ -0.24
Rfwd3Q8CIK8 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC13.56□□□□□ -0.24
Rfwd3Q8CIK8 Ndufs6-203ENSMUST00000222930 512 ntTSL 3 BASIC13.56□□□□□ -0.24
Rfwd3Q8CIK8 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Rfwd3Q8CIK8 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Rfwd3Q8CIK8 Fbxl12-205ENSMUST00000140702 1555 ntBASIC13.56□□□□□ -0.24
Rfwd3Q8CIK8 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
Rfwd3Q8CIK8 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC13.56□□□□□ -0.24
Rfwd3Q8CIK8 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Rfwd3Q8CIK8 Hif1a-201ENSMUST00000021530 4724 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
Rfwd3Q8CIK8 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Rfwd3Q8CIK8 Egfl7-212ENSMUST00000166920 1391 ntAPPRIS P4 TSL 1 (best) BASIC13.56□□□□□ -0.24
Rfwd3Q8CIK8 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC13.56□□□□□ -0.24
Rfwd3Q8CIK8 Fbxo8-202ENSMUST00000110322 1709 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Rfwd3Q8CIK8 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Rfwd3Q8CIK8 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Rfwd3Q8CIK8 Notch1-201ENSMUST00000028288 9488 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Rfwd3Q8CIK8 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Rfwd3Q8CIK8 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC13.55□□□□□ -0.24
Rfwd3Q8CIK8 Kcng1-202ENSMUST00000109191 4089 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
Rfwd3Q8CIK8 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Rfwd3Q8CIK8 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Rfwd3Q8CIK8 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Rfwd3Q8CIK8 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
Rfwd3Q8CIK8 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Rfwd3Q8CIK8 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
Rfwd3Q8CIK8 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
Rfwd3Q8CIK8 Gpx3-201ENSMUST00000082430 1594 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Rfwd3Q8CIK8 Tbc1d5-205ENSMUST00000224528 4764 ntAPPRIS ALT2 BASIC13.55□□□□□ -0.24
Rfwd3Q8CIK8 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
Rfwd3Q8CIK8 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Rfwd3Q8CIK8 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
Rfwd3Q8CIK8 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC13.55□□□□□ -0.24
Rfwd3Q8CIK8 Gm26308-201ENSMUST00000157768 69 ntBASIC13.55□□□□□ -0.24
Rfwd3Q8CIK8 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC13.55□□□□□ -0.24
Rfwd3Q8CIK8 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC13.55□□□□□ -0.24
Rfwd3Q8CIK8 4930573H18Rik-201ENSMUST00000197696 906 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Rfwd3Q8CIK8 Gm45098-201ENSMUST00000207179 657 ntBASIC13.55□□□□□ -0.24
Rfwd3Q8CIK8 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Rfwd3Q8CIK8 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Rfwd3Q8CIK8 Gm6018-201ENSMUST00000216090 1306 ntBASIC13.55□□□□□ -0.24
Rfwd3Q8CIK8 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Rfwd3Q8CIK8 AI606473-201ENSMUST00000177201 1731 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Rfwd3Q8CIK8 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Rfwd3Q8CIK8 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Rfwd3Q8CIK8 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Rfwd3Q8CIK8 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Rfwd3Q8CIK8 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Rfwd3Q8CIK8 Il9r-202ENSMUST00000128311 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Rfwd3Q8CIK8 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
Rfwd3Q8CIK8 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Rfwd3Q8CIK8 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC13.55□□□□□ -0.24
Rfwd3Q8CIK8 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
Rfwd3Q8CIK8 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Rfwd3Q8CIK8 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
Rfwd3Q8CIK8 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Rfwd3Q8CIK8 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Rfwd3Q8CIK8 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Rfwd3Q8CIK8 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
Rfwd3Q8CIK8 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Rfwd3Q8CIK8 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC13.54□□□□□ -0.24
Rfwd3Q8CIK8 Jakmip3-201ENSMUST00000106111 1571 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Rfwd3Q8CIK8 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Rfwd3Q8CIK8 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Rfwd3Q8CIK8 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Rfwd3Q8CIK8 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Rfwd3Q8CIK8 Gins2-201ENSMUST00000034278 3900 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Rfwd3Q8CIK8 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Rfwd3Q8CIK8 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Rfwd3Q8CIK8 Dhx9-202ENSMUST00000186380 4561 ntAPPRIS P2 TSL 2 BASIC13.54□□□□□ -0.24
Rfwd3Q8CIK8 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Rfwd3Q8CIK8 Ube2k-210ENSMUST00000202679 4682 ntTSL 5 BASIC13.54□□□□□ -0.24
Rfwd3Q8CIK8 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Rfwd3Q8CIK8 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Rfwd3Q8CIK8 Specc1-202ENSMUST00000092415 6797 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Rfwd3Q8CIK8 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Rfwd3Q8CIK8 Gm25287-201ENSMUST00000103846 110 ntBASIC13.54□□□□□ -0.24
Rfwd3Q8CIK8 Gm22918-201ENSMUST00000103855 110 ntBASIC13.54□□□□□ -0.24
Rfwd3Q8CIK8 Mettl23-201ENSMUST00000106370 1276 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Rfwd3Q8CIK8 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC13.54□□□□□ -0.24
Rfwd3Q8CIK8 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC13.54□□□□□ -0.24
Rfwd3Q8CIK8 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC13.54□□□□□ -0.24
Rfwd3Q8CIK8 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC13.54□□□□□ -0.24
Rfwd3Q8CIK8 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC13.54□□□□□ -0.24
Rfwd3Q8CIK8 Gm20444-201ENSMUST00000174014 648 ntTSL 3 BASIC13.54□□□□□ -0.24
Rfwd3Q8CIK8 9130230N09Rik-201ENSMUST00000174568 663 ntTSL 3 BASIC13.54□□□□□ -0.24
Rfwd3Q8CIK8 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC13.54□□□□□ -0.24
Rfwd3Q8CIK8 Pomc-201ENSMUST00000020990 1031 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 52.7 ms