Protein–RNA interactions for Protein: Q8CC84

Lysmd4, LysM and putative peptidoglycan-binding domain-containing protein 4, mousemouse

Predictions only

Length 293 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd4Q8CC84 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
Lysmd4Q8CC84 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
Lysmd4Q8CC84 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Lysmd4Q8CC84 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Lysmd4Q8CC84 Gm13496-201ENSMUST00000141133 1165 ntTSL 2 BASIC12.91□□□□□ -0.34
Lysmd4Q8CC84 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC12.91□□□□□ -0.34
Lysmd4Q8CC84 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Lysmd4Q8CC84 Gm4899-201ENSMUST00000178708 719 ntBASIC12.91□□□□□ -0.34
Lysmd4Q8CC84 Gm8597-201ENSMUST00000191525 1109 ntBASIC12.91□□□□□ -0.34
Lysmd4Q8CC84 Gm21362-201ENSMUST00000194272 928 ntBASIC12.91□□□□□ -0.34
Lysmd4Q8CC84 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC12.91□□□□□ -0.34
Lysmd4Q8CC84 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Lysmd4Q8CC84 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Lysmd4Q8CC84 Me2-201ENSMUST00000025439 2455 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Lysmd4Q8CC84 Plxdc1-203ENSMUST00000107565 2439 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Lysmd4Q8CC84 Trim52-201ENSMUST00000022708 3075 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
Lysmd4Q8CC84 Ero1lb-202ENSMUST00000220811 3341 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Lysmd4Q8CC84 Rbak-201ENSMUST00000049861 3335 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Lysmd4Q8CC84 Phka1-204ENSMUST00000119229 6025 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Lysmd4Q8CC84 Dmxl1-202ENSMUST00000180611 11319 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Lysmd4Q8CC84 Syvn1-201ENSMUST00000025723 2780 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Lysmd4Q8CC84 Adam23-205ENSMUST00000114107 6110 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Lysmd4Q8CC84 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Lysmd4Q8CC84 Pde4d-203ENSMUST00000117420 1955 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Lysmd4Q8CC84 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
Lysmd4Q8CC84 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Lysmd4Q8CC84 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC12.9□□□□□ -0.34
Lysmd4Q8CC84 Gm8096-201ENSMUST00000209921 1591 ntBASIC12.9□□□□□ -0.34
Lysmd4Q8CC84 Zfp707-201ENSMUST00000109966 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Lysmd4Q8CC84 Trem1-202ENSMUST00000113251 2077 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Lysmd4Q8CC84 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Lysmd4Q8CC84 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Lysmd4Q8CC84 Fam83e-201ENSMUST00000129507 2908 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Lysmd4Q8CC84 Gm15889-202ENSMUST00000212669 2443 ntBASIC12.9□□□□□ -0.34
Lysmd4Q8CC84 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Lysmd4Q8CC84 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Lysmd4Q8CC84 Pigg-202ENSMUST00000118910 3030 ntTSL 5 BASIC12.9□□□□□ -0.34
Lysmd4Q8CC84 Lrrc56-202ENSMUST00000070458 2502 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
Lysmd4Q8CC84 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Lysmd4Q8CC84 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Lysmd4Q8CC84 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC12.9□□□□□ -0.34
Lysmd4Q8CC84 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Lysmd4Q8CC84 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Lysmd4Q8CC84 Gm28033-201ENSMUST00000184224 96 ntBASIC12.9□□□□□ -0.34
Lysmd4Q8CC84 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Lysmd4Q8CC84 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC12.9□□□□□ -0.34
Lysmd4Q8CC84 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Lysmd4Q8CC84 Qsox1-202ENSMUST00000111764 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Lysmd4Q8CC84 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Lysmd4Q8CC84 Ell-201ENSMUST00000093454 3072 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Lysmd4Q8CC84 Phldb1-210ENSMUST00000134465 5244 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
Lysmd4Q8CC84 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Lysmd4Q8CC84 Cmpk1-201ENSMUST00000030491 3170 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Lysmd4Q8CC84 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Lysmd4Q8CC84 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Lysmd4Q8CC84 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
Lysmd4Q8CC84 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Lysmd4Q8CC84 Gm36839-201ENSMUST00000222088 2093 ntTSL 5 BASIC12.9□□□□□ -0.34
Lysmd4Q8CC84 Arhgap8-205ENSMUST00000168811 1464 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Lysmd4Q8CC84 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC12.9□□□□□ -0.34
Lysmd4Q8CC84 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC12.9□□□□□ -0.34
Lysmd4Q8CC84 Zmym4-201ENSMUST00000106108 7102 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Lysmd4Q8CC84 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Lysmd4Q8CC84 Prss44-201ENSMUST00000098345 1838 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Lysmd4Q8CC84 Tsc2-217ENSMUST00000227745 5598 ntAPPRIS ALT2 BASIC12.9□□□□□ -0.34
Lysmd4Q8CC84 Cnot7-201ENSMUST00000034012 2615 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
Lysmd4Q8CC84 Arid5a-208ENSMUST00000137906 5504 ntTSL 1 (best) BASIC12.9□□□□□ -0.35
Lysmd4Q8CC84 Ap2a1-203ENSMUST00000166972 3449 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
Lysmd4Q8CC84 Fbxo21-206ENSMUST00000202447 3959 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Lysmd4Q8CC84 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Lysmd4Q8CC84 Ttc3-201ENSMUST00000117648 7417 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
Lysmd4Q8CC84 1600014C10Rik-205ENSMUST00000178876 3283 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Lysmd4Q8CC84 Tbc1d10c-201ENSMUST00000045864 1758 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Lysmd4Q8CC84 Vwc2-202ENSMUST00000109681 3371 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Lysmd4Q8CC84 Adad1-203ENSMUST00000144629 3101 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Lysmd4Q8CC84 Slc39a2-201ENSMUST00000047726 2334 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Lysmd4Q8CC84 Slc34a1-201ENSMUST00000057167 2433 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Lysmd4Q8CC84 Pax6-201ENSMUST00000090391 2869 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Lysmd4Q8CC84 Fut7-202ENSMUST00000100320 2076 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Lysmd4Q8CC84 Gnas-210ENSMUST00000109095 2059 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Lysmd4Q8CC84 Cd3d-201ENSMUST00000034602 1617 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Lysmd4Q8CC84 Vav1-203ENSMUST00000112870 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Lysmd4Q8CC84 Zbtb17-201ENSMUST00000006377 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Lysmd4Q8CC84 Pard3b-202ENSMUST00000075374 8392 ntAPPRIS P2 TSL 5 BASIC12.89□□□□□ -0.35
Lysmd4Q8CC84 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Lysmd4Q8CC84 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Lysmd4Q8CC84 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC12.89□□□□□ -0.35
Lysmd4Q8CC84 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Lysmd4Q8CC84 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC12.89□□□□□ -0.35
Lysmd4Q8CC84 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
Lysmd4Q8CC84 Lyzl6-201ENSMUST00000021328 900 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Lysmd4Q8CC84 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Lysmd4Q8CC84 Elmo3-202ENSMUST00000212033 2351 ntTSL 5 BASIC12.89□□□□□ -0.35
Lysmd4Q8CC84 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Lysmd4Q8CC84 Trf-201ENSMUST00000035158 2571 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Lysmd4Q8CC84 AC164565.1-201ENSMUST00000217520 1484 ntBASIC12.89□□□□□ -0.35
Lysmd4Q8CC84 Brsk2-204ENSMUST00000105989 2149 ntAPPRIS P4 TSL 5 BASIC12.89□□□□□ -0.35
Lysmd4Q8CC84 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Lysmd4Q8CC84 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Lysmd4Q8CC84 Msh2-201ENSMUST00000024967 3283 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 32.4 ms