Protein–RNA interactions for Protein: Q8BXJ2

Trerf1, Transcriptional-regulating factor 1, mousemouse

Predictions only

Length 1,205 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trerf1Q8BXJ2 Ick-203ENSMUST00000117330 2698 ntAPPRIS ALT2 TSL 2 BASIC15.22■□□□□ 0.03
Trerf1Q8BXJ2 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Trerf1Q8BXJ2 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Trerf1Q8BXJ2 Ppp2r5c-201ENSMUST00000084985 1847 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
Trerf1Q8BXJ2 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trerf1Q8BXJ2 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trerf1Q8BXJ2 Myo1d-201ENSMUST00000041065 5354 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Trerf1Q8BXJ2 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Trerf1Q8BXJ2 Sema6c-202ENSMUST00000090823 4029 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trerf1Q8BXJ2 Tshz2-202ENSMUST00000109159 4314 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trerf1Q8BXJ2 Gm45638-201ENSMUST00000211507 2878 ntBASIC15.22■□□□□ 0.03
Trerf1Q8BXJ2 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trerf1Q8BXJ2 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Trerf1Q8BXJ2 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC15.22■□□□□ 0.03
Trerf1Q8BXJ2 Gm9385-201ENSMUST00000117563 472 ntBASIC15.22■□□□□ 0.03
Trerf1Q8BXJ2 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trerf1Q8BXJ2 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trerf1Q8BXJ2 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trerf1Q8BXJ2 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Trerf1Q8BXJ2 Camta1-211ENSMUST00000169423 5208 ntAPPRIS P2 TSL 5 BASIC15.22■□□□□ 0.03
Trerf1Q8BXJ2 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trerf1Q8BXJ2 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Trerf1Q8BXJ2 Pcdha6-202ENSMUST00000193777 5367 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trerf1Q8BXJ2 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC15.22■□□□□ 0.03
Trerf1Q8BXJ2 Rnf144a-201ENSMUST00000020971 5164 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trerf1Q8BXJ2 4632404H12Rik-201ENSMUST00000038450 2791 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Trerf1Q8BXJ2 Myef2-206ENSMUST00000142718 2942 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Trerf1Q8BXJ2 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trerf1Q8BXJ2 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trerf1Q8BXJ2 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Trerf1Q8BXJ2 Atp2b3-201ENSMUST00000033744 3894 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Trerf1Q8BXJ2 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trerf1Q8BXJ2 Arl6ip6-201ENSMUST00000028336 2548 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trerf1Q8BXJ2 Asxl1-205ENSMUST00000227428 6981 ntAPPRIS ALT2 BASIC15.21■□□□□ 0.03
Trerf1Q8BXJ2 Cwc27-201ENSMUST00000022228 2071 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trerf1Q8BXJ2 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC15.21■□□□□ 0.03
Trerf1Q8BXJ2 Pramel1-201ENSMUST00000037419 2794 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trerf1Q8BXJ2 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trerf1Q8BXJ2 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trerf1Q8BXJ2 Kcnq1-201ENSMUST00000009689 3029 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trerf1Q8BXJ2 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trerf1Q8BXJ2 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC15.21■□□□□ 0.03
Trerf1Q8BXJ2 Rbl1-201ENSMUST00000029170 4862 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trerf1Q8BXJ2 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trerf1Q8BXJ2 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trerf1Q8BXJ2 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trerf1Q8BXJ2 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trerf1Q8BXJ2 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC15.21■□□□□ 0.03
Trerf1Q8BXJ2 Gm12892-201ENSMUST00000117367 1146 ntBASIC15.21■□□□□ 0.03
Trerf1Q8BXJ2 Gm27301-201ENSMUST00000184012 127 ntBASIC15.21■□□□□ 0.03
Trerf1Q8BXJ2 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC15.21■□□□□ 0.03
Trerf1Q8BXJ2 Gm2272-201ENSMUST00000194903 582 ntBASIC15.21■□□□□ 0.03
Trerf1Q8BXJ2 Gm43575-201ENSMUST00000196420 516 ntBASIC15.21■□□□□ 0.03
Trerf1Q8BXJ2 Gm45231-201ENSMUST00000208629 1064 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Trerf1Q8BXJ2 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC15.21■□□□□ 0.03
Trerf1Q8BXJ2 Erp29-203ENSMUST00000130451 5204 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trerf1Q8BXJ2 Plch2-207ENSMUST00000139976 5322 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trerf1Q8BXJ2 Pkdrej-201ENSMUST00000064370 7058 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
Trerf1Q8BXJ2 Ap3d1-201ENSMUST00000020420 4805 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trerf1Q8BXJ2 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Trerf1Q8BXJ2 Kcna5-201ENSMUST00000060972 2862 ntAPPRIS P1 BASIC15.21■□□□□ 0.02
Trerf1Q8BXJ2 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Trerf1Q8BXJ2 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Trerf1Q8BXJ2 Pgr-201ENSMUST00000070463 3068 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trerf1Q8BXJ2 Pgr-202ENSMUST00000098986 3068 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Trerf1Q8BXJ2 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trerf1Q8BXJ2 Taf3-201ENSMUST00000026888 4792 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trerf1Q8BXJ2 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Trerf1Q8BXJ2 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Trerf1Q8BXJ2 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trerf1Q8BXJ2 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trerf1Q8BXJ2 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC15.2■□□□□ 0.02
Trerf1Q8BXJ2 Rbm47-201ENSMUST00000094756 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trerf1Q8BXJ2 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC15.2■□□□□ 0.02
Trerf1Q8BXJ2 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trerf1Q8BXJ2 March8-213ENSMUST00000203193 4245 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Trerf1Q8BXJ2 Dio1-202ENSMUST00000106748 396 ntTSL 5 BASIC15.2■□□□□ 0.02
Trerf1Q8BXJ2 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trerf1Q8BXJ2 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Trerf1Q8BXJ2 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC15.2■□□□□ 0.02
Trerf1Q8BXJ2 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC15.2■□□□□ 0.02
Trerf1Q8BXJ2 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC15.2■□□□□ 0.02
Trerf1Q8BXJ2 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trerf1Q8BXJ2 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trerf1Q8BXJ2 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC15.2■□□□□ 0.02
Trerf1Q8BXJ2 Gm10154-201ENSMUST00000084445 354 ntBASIC15.2■□□□□ 0.02
Trerf1Q8BXJ2 Cand1-201ENSMUST00000020315 7766 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trerf1Q8BXJ2 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trerf1Q8BXJ2 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
Trerf1Q8BXJ2 Tmem30c-202ENSMUST00000119407 1396 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trerf1Q8BXJ2 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trerf1Q8BXJ2 Zmiz1os1-201ENSMUST00000156682 3469 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Trerf1Q8BXJ2 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trerf1Q8BXJ2 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trerf1Q8BXJ2 Mgat3-201ENSMUST00000044970 4665 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trerf1Q8BXJ2 Ints14-201ENSMUST00000037504 2837 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trerf1Q8BXJ2 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trerf1Q8BXJ2 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Trerf1Q8BXJ2 Luc7l3-209ENSMUST00000166312 5244 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Trerf1Q8BXJ2 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 42.4 ms